KEGG   Citrus sinensis (Valencia orange): 102630722
Entry
102630722         CDS       T02983                                 
Name
(RefSeq) nuclear pore complex protein NUP93A
  KO
K14309  nuclear pore complex protein Nup93
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102630722
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cit03019]
    102630722
Messenger RNA biogenesis [BR:cit03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     102630722
SSDB
Motif
Pfam: Nic96 TPR_14 TPR_2 TPR_8 TPR_12 TPR_1 TPR_7 PrmA
Other DBs
NCBI-GeneID: 102630722
NCBI-ProteinID: XP_006492948
LinkDB
Position
9:complement(join(8906956..8907033,8907622..8907913,8908724..8908905,8909256..8910158,8910260..8910346,8911494..8911577,8911718..8911771,8912077..8912211,8912327..8912422,8912774..8913043,8913857..8913946,8915226..8915285,8915710..8915776,8916015..8916106,8917003..8917104))
AA seq 863 aa
MAGEQDMSGWTDLLHSSTKLLEQAAPSAQFPPLQRNLDQLEALSKKLKAKTIRTETPSQS
IAATRLLAREGINAEQLARDLKSFELKTTFEDVFPTEATSVEEYLQQVHEVAMVSAIQKA
QTDNLRSFNDYMMKVLEEDWQKEKRDFLQSLSRISTLPKTNMTDTSTGGTLPGQMASMAS
SPQISSGPSGMELVPLANKPLLEKKATVYAEVVKNLNNARQQGLPFKPATAFKGAYESLA
IESSSGKSVNIQKIWHLLQTMMGEHATVQQTASRKMSLVIGARRHLEWGHEKYIMDTIQS
HPAQAALGGVVGNLQRVRAFLRIRLRDYGVLDFDIGDTRRQPPVDTTWQQIYFCLRTGYY
DEARNVALSSRASNQFAPLLTEWINTGGMVPPEIAAAGSEECDKMLRMGDRVGRAAYDKK
KLLLYAIISGSRRQIDRLLRDLPTLFGTIEDFLWFKLSAIRDVPSEAPSVVLSDGLAPYS
LDDLQVYLNKFDPSYYTKNGKDPLVYPYVLLLSIQVLPAVLYLSKESGDEGYNIDAAHIS
IVLADHGVLSEGSGAGKKLGLMDPYAEASSIIRQYGSAYLRLGNLQMALEYYAQAAAAVG
GGQLSWTGRANVDQQRQKSLMLKQLLTELLLRDGGIYLLLGSRGAGEEGELGRYITDLKA
RQQFLLEAAGQCQEAGLYDKSIELQKRVGAFSMALDTINKCLSEAIFAMSRGRLDGESQT
ASLIHSGNEILEMEKYYPEVSLHEREQVLEQQTVLRQLEAILSVHKMARSGHYLDALREV
AKLPFLPFDPRVPDAMVDVFQSLSPHVQACVPDLLRVALTCLDNVTDTDGSLRAMRAKIA
NFLANNMNQNWPRDLYERVARSL
NT seq 2592 nt   +upstreamnt  +downstreamnt
atggcgggtgagcaagacatgagtggctggaccgatcttcttcactcctcaacaaagctt
ctcgaacaggcagctccttctgctcagttccctcctcttcagaggaacttagatcaacta
gaagcattgtcaaagaagctcaaggcaaaaaccataagaaccgagactccttctcagtct
attgcagccacaaggctacttgcacgtgagggaataaatgcggaacagcttgctagagat
ttgaagtcatttgaattgaagacaacatttgaggatgtttttcccactgaggcaactagt
gtggaagaatatctgcaacaggttcatgaagttgcaatggtgtcagccatccaaaaagct
cagacagataaccttagaagttttaatgattacatgatgaaagttctggaggaagactgg
cagaaagagaaacgtgactttcttcagagcttaagccgaatttcaacattacccaagact
aacatgactgatacgagcactggaggtactcttcctggtcaaatggcatccatggcttct
agtcctcagatttcctcaggtccttctgggatggagcttgtacctttagctaataagcca
cttcttgagaaaaaagcaactgtctacgctgaagttgtgaagaacctgaacaatgcaagg
cagcaaggactgccatttaaacctgctaccgcttttaagggcgcttatgaaagcttggcc
attgaatcatctagtggaaaatcagttaacatacagaaaatatggcaccttcttcagaca
atgatgggtgagcatgcaactgtgcaacagactgcttcaagaaagatgtcacttgtaatt
ggtgcaaggcgccacctggaatggggacacgagaagtatattatggatactatacaaagt
catcctgcacaggctgcccttggtggagttgttggaaatttacagagagttcgggctttt
cttcgaatacgattaagggattatggagtcttggattttgacattggtgacactcgtagg
cagcctccagttgataccacttggcagcagatttatttttgcttgagaactggatactat
gatgaagcaagaaacgttgccctatcatcccgtgcttcaaaccagtttgctcctctgctt
acagagtggataaacactggaggtatggtgccgccggagattgcagctgctggttctgaa
gaatgtgataaaatgttgagaatgggtgatcgagtaggtcgagctgcatatgacaagaaa
aagttgctactctatgctatcatatctggctctcgccggcaaattgaccggctgctaaga
gatctaccaactcttttcggtactatagaggattttttgtggttcaaactttcagccata
cgggatgtacccagtgaagctccttctgttgtcctgagcgatggcttggccccatacagt
ttggatgatttgcaggtttacctaaacaagtttgatccatcatattatacaaaaaatgga
aaggaccctctggtatacccttatgtgttgcttttaagcattcaggtgctaccagctgtt
ctttatttatctaaagaatcaggtgatgaggggtataatattgatgctgcccacatatca
attgtgctagcagaccacggggtcctttctgaaggttctggtgctgggaaaaaactggga
ttgatggatccatatgcagaggcatccagcataattaggcaatatgggtctgcttatctt
cgtcttggcaatctccagatggcattagaatattatgcacaagctgctgctgcagtaggt
ggtggacagttgtcgtggactgggagagctaatgttgatcaacaaaggcagaaaagcttg
atgctgaagcaacttctaactgaactattgttacgagatggtggaatttatcttttactt
ggttcaagaggagctggggaggaaggtgaattgggacgatatataactgatctcaaagct
agacaacagtttttacttgaagctgctgggcagtgtcaggaagctgggctttatgataaa
tctatagaacttcagaagagagttggagccttctcaatggcattggatacaattaacaag
tgtctctcagaagcaatttttgccatgtcccgtggtaggttggatggtgaaagtcagact
gctagcctaattcattctggcaacgaaattttggagatggaaaaatattatcctgaagtc
agtcttcatgaacgagagcaagttctggagcaacagactgtattgagacagcttgaggca
atattgtctgtccataagatggcaaggtcaggccattatttagatgctttgagggaggtc
gccaaactcccatttcttccatttgatccacgagttccagatgccatggttgatgtgttt
cagagtttatctcctcacgtccaagcttgtgtgcctgacctactgagggttgctctaact
tgtctggacaatgttacagataccgatggatcgcttcgtgccatgagggcgaagattgca
aactttcttgctaacaatatgaatcagaattggcctcgtgatttgtatgaaagggtcgcc
cggagcttgtga

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