Clostridium innocuum: G4D55_13220
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Entry
G4D55_13220 CDS
T06525
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
ciu
Clostridium innocuum
Pathway
ciu00300
Lysine biosynthesis
ciu00550
Peptidoglycan biosynthesis
ciu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ciu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
G4D55_13220
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
G4D55_13220
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ciu01011
]
G4D55_13220
Enzymes [BR:
ciu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
G4D55_13220
Peptidoglycan biosynthesis and degradation proteins [BR:
ciu01011
]
Precursor biosynthesis
Amino acid ligase
G4D55_13220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
QIX09981
LinkDB
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Position
complement(2735194..2736654)
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AA seq
486 aa
AA seq
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MLREGRFGFILEMIRLNELFALLHIDCEDARILQGISDDTRDVKKDWLFVCRKGSLYDGA
AFLQEALDKGAVVLCDQMLPMQHVYYTPHVERITQALLELYYGDLCTRLHVIGITGTNGK
TSVASIISQLLKMEGCRVLQIGTGSVRYPDEVIEIHNTTPGCFQLANYFRRAHDEKITHV
VMEVSSHAIDQNRISFLHFDDIVYTNITQDHLDYHLTRVHYRYTKFKLRRYLKPQGTIVY
NSDLSYMQELVNLAQHACISIGMQAAHFPLHHVELSDHDLSFRLQGYDFHARLLGMVNVY
NLAEAIVVVHRLGFSYERLRKDCEKLLPVSGRMEVMEVGGFTIWIDYAHTAAAVEELLVF
ANSVKKGRILTILGCGGERDRTKRPAMAAIAAKYSDLAVFTSDNPRGESVDRILADMKCE
SFPNAAVFENRYFAIKHTIKVAQNSDIIIIAGKGSEETITAFGQEYPFSDRSCVKERLAK
EELLWK
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
gtgctgagggaggggaggtttggatttatcttggaaatgataaggttaaatgagttgttt
gcactgctgcatatcgactgtgaggatgcgcgtatcctgcagggaatcagtgatgatacc
cgcgacgtaaaaaaggactggctctttgtctgccgcaaaggaagcctatatgatggagcg
gcgtttttacaggaggcgctggacaagggggcagtggtgctgtgcgatcagatgctgcct
atgcagcatgtctactacacaccgcatgtagagcgcattacacaggcattgctggagctg
tactatggggatttatgtacccgtctgcatgtgatcggcattacgggaaccaatggaaaa
acaagtgttgccagcatcatctcccagctgctgaagatggaaggatgccgggttctgcag
atcggcaccgggagtgtccgctatccggatgaggtcattgaaattcacaacaccacgccg
ggctgttttcagctggcaaactatttcaggagagcgcacgatgagaagattacccatgtt
gtcatggaggtcagctcacatgccattgatcaaaaccgcatcagctttctgcattttgat
gatatcgtttatacgaatatcacacaggatcatctggattatcacctgaccagagtgcat
taccgctataccaaattcaagctgcgccgctatctgaagccgcagggaaccattgtgtac
aacagtgacctcagctatatgcaggagctggtcaaccttgcccagcatgcctgtatcagc
atcggtatgcaggcagcacattttccgctgcatcatgtggaacttagtgatcatgacctt
tcctttcgcctgcagggctatgattttcatgcccgtttgctgggtatggtgaatgtatac
aatctggcagaggcaattgtggttgtccatcgactgggcttttcctatgagcgcttgcgt
aaggattgtgagaagctgctgccggtcagcggtcgcatggaggttatggaggttggcgga
ttcaccatctggatcgactatgcacatactgcagccgcggtcgaagagctgctggtcttt
gccaattctgtaaaaaaaggaaggattctgaccatcttggggtgtggaggagaacgggat
cgcaccaagcgtcctgccatggctgccattgccgcaaaatacagtgatcttgccgttttc
acgagtgataatccaagaggggaaagtgtagatcgtatccttgccgacatgaaatgtgag
agctttcccaacgcagcagtcttcgaaaatcgctactttgcgataaaacatactatcaaa
gtagcacaaaatagtgatataataataatcgctggaaaagggagcgaggaaaccatcacg
gctttcggacaagaatatcccttttctgatcgatcctgcgtaaaggaacgtctagctaag
gaggaactactttggaaataa
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