Carettochelys insculpta (pitted-shelled turtle): 142016823
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Entry
142016823 CDS
T11194
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ciz04040
]
142016823
Ion channels [BR:
ciz04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
142016823
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQCJ-SCHIP1
ATP-synt_B
IQ
Neur_chan_memb
HB_ELP1
K_channel_TID
Motif
Other DBs
NCBI-GeneID:
142016823
NCBI-ProteinID:
XP_074857244
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All DBs
Position
8:complement(40056647..40156977)
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AA seq
2022 aa
AA seq
DB search
MAQSVLVPPGPDSFHYFTRESLAAIEQHIAEEKAKKSKQERKDDDDENGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYMLTPFNPLRK
IAIKILVHSYSTLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILAR
GFCLEGFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTI
VGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCLQWPPDNSTLEINIVSYFN
STIGENGTYVNTTVSTFNWEEYIEDKSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAG
RNPNYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLI
NLILAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAAVAADSREFSG
VGGVGGFSESSSEASKLSSKSAKERRNRRKKRKQKEQSEGEEKDEEEFRKSESEDSIRRK
GFRFSIEGNRLTYEKRFSSPHQSLLSIRGSLFSPRRSSRTSLFSFRGRAKDVGSENDFAD
DEHSTFEDNESRRGSLFVPHRHGERRNSNISQASRSSRMVPVLPANGKMHSTVDCNGVVS
LVGGPPALTSPTGQLLPEVIIASSGCCMTGTTTETELRKRRTSSYQISMDFLTEPSARQR
ALSIASILTNTMEELEESRQKCPPCWYKFANTCLIWDCCSPWLKVKHIVNLIVMDPFVDL
AITICIVLNTLFMAMEHYPMTEQFSHVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGW
NIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGN
LTLVLAIIVFIFAVVGMQLFGKSYKECVCKISNDCELPRWHMHDFFHSFLIVFRVLCGEW
IETMWDCMEVAGQAMCLIVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNL
QIAVGRIQKGIDFVKRKAREFIQKAFVRKQKALDEIKPLEDLNNKKDSCISNHTVVEIGK
DLNYLKDGNGTTSGVGSSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFS
SESDLEESKEKLNASSSSEGSTVDIGLPQEGEQPEIEPEEALEPEACFTEGCVRKFKCCQ
VSIEDGKGKMWWNLRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLE
YADKVFTYIFILEMVLKWVAYGFQIYFTNAWCWLDFLIVDVSLISLTANALGYSELGAIK
SLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF
YHCVNTTTDERFDISQINNYSQCEELIKNNETARWKNVKVNFDNVGLGYLSLLQVATFKG
WMDIMYAAVDSRNVLDQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKF
GGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQVFDISIMILICL
NMVTMMVETDDQSDEMQDNLWWINLVFIVLFTGECILKLISLRYYYFTIGWNIFDFVVVI
LSIVGMFLADLIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNI
GLLLFLVMFIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPI
LNSGEPDCDPNKDHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVAT
EESAEPLSEDDFEMFYEVWEKFDPDATQFIEFHKLSDFAASLDPPLLIAKPNKVQLIAMD
LPMVSGDRIHCLDILFAFTKRVLGESGEMDTLRIQMEDRFMAANPSKVSYEPITTTLKRK
QEEVSAIIIQRAFRRYLLKQKIKKVSCMFNQDKDKDEDDLPIKEDMIIDKLNENSTPEKT
DMTPSTTSPPSYDSVTKPDKEKYEKDKSEKEDKGKDVREGKK
NT seq
6069 nt
NT seq
+upstream
nt +downstream
nt
atggcacagtcggtgctggtaccaccaggacctgacagtttccactatttcacgagagag
tcattggcagctattgaacaacatattgctgaagaaaaagctaagaagtctaaacaagaa
cgtaaagatgatgatgatgaaaacggaccaaaaccaaacagtgacctggaggcaggaaag
acactgccatttatttatggtgatatacctccaggaatggtgtccgagcccttggaggat
cttgacccatattatatcaataaaaaaacttttatagtattgaataaagggaaggcaatc
ttccgattcagtgccacctctgctctgtacatgttaactcccttcaatcctcttagaaaa
atagctattaaaattttggtacattcatattctacattgttcagcatgcttattatgtgc
actattttgaccaactgtgtatttatgactatgagtaaccctccggattggacaaagaat
gtagaatacacattcactggaatttatacctttgaatcacttataaaaattcttgcaagg
ggcttctgtttagaaggctttacttttcttcgagacccatggaattggctagatttcact
gtcattacatttgcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgaga
acgttcagagttctccgagcattgaaaacaatatcagtcattccaggcttgaagactatc
gtgggagccctaattcagtctgtgaagaagctctcagatgtaatgatcctgactgtgttt
tgtctgagtgtatttgcactaatagggctgcagctgttcatgggcaacttgaggcataaa
tgcttacagtggcctccagacaattccactttggaaataaatattgtttcctactttaat
agcacaataggagaaaatggaacatatgttaatacaacagtgagcacatttaattgggag
gagtacattgaggacaaaagtcatttttactttttggaaggacaaaatgatgctctcctg
tgtggtaatagctcagatgcaggtcaatgtccagaaggatatatttgtgtgaaagctggt
aggaaccccaactatggctacacaagctttgacacattcagctgggcattcttgtcactc
tttcgactgatgactcaggacttttgggagaatctttatcagctgacgctacgtgctgct
ggcaaaacatacatgatattttttgttctggtgattttcctgggttctttctatctgatt
aacttgatcctggctgttgttgctatggcctatgaagaacagaatcaagcaaccatggaa
gaggcagagcagaaggaggcagaatttcagcagatgcttgaacagctgaaaaaacaacaa
gaagaagctcaggcagcagcagctgctgcagtagcagctgattcaagagagttcagtgga
gtaggaggagtaggaggattctctgaaagttcttctgaagcatcaaaattgagttcaaag
agtgctaaagagagaaggaacagaaggaaaaagagaaaacagaaggagcagtctgaagga
gaggagaaagatgaggaagaatttcgcaaatctgaatcagaagatagcattagaaggaaa
ggtttccgattctctattgaaggaaacaggctgacatatgaaaagagattctcttctcca
catcagtctttgctgagtattcgtggctccctgttttccccaaggcgcagcagtagaaca
agtcttttcagcttcagaggtcgagcaaaggatgtaggatcagaaaatgactttgccgat
gatgaacacagcacttttgaagacaatgagagtagaagaggttctctctttgttcctcat
agacatggtgaacgccgcaacagtaacattagtcaggccagtaggtcatccaggatggta
ccagtgctaccagcaaatgggaagatgcacagcactgtagattgcaatggagtcgtttct
ttagttggtggacctccagctcttacatcacctactggacagcttctcccagaggtgatc
attgccagtagtggctgttgtatgactggtaccacaacagaaacagaattaagaaagaga
cggacgagttcttatcagatttctatggatttcctgacagagcccagtgcaaggcaaaga
gcactgagtatagccagcatactcacgaatacaatggaagaacttgaagaatccaggcag
aaatgcccaccatgttggtataaatttgctaacacatgcttgatctgggattgctgctct
ccatggttaaaagtaaaacatattgtaaatttgattgtgatggatccgtttgttgatctt
gctattactatctgcattgttttaaatacattatttatggccatggagcattatccaatg
acggaacagtttagtcacgtgctttcagtcggaaatctggtctttactgggatcttcaca
gcagaaatgtttctcaagataattgctatggatccttattattatttccaagaaggttgg
aatattttcgatggttttattgttagccttagtttaatggagcttggtcttgcaaatgtg
gaaggattatctgttctcagatcattcagattgcttcgagttttcaaattggcaaaatct
tggccaacactgaatatgctgataaagattattggtaactcagtaggggctttgggaaat
ttgacactggtgctggccatcattgtcttcatttttgctgtggttggtatgcagctgttt
ggaaaaagctacaaggaatgtgtctgcaagatctccaatgactgtgaacttccacgctgg
cacatgcatgacttcttccactctttcttgattgtattccgagtgctgtgtggagaatgg
atagagactatgtgggattgcatggaggttgcagggcaagccatgtgccttattgttttc
atgatggtcatggtgattggaaatctagtggtactcaacctctttctggccttgctactg
agctcctttagttcagacaaccttgcagctactgatgatgataatgaaatgaacaatctc
caaattgcagtgggaaggattcagaagggaatagattttgtaaaaagaaaagcacgtgaa
ttcatccaaaaagcctttgttaggaaacaaaaagctttagatgaaatcaagcctcttgaa
gatctaaacaacaaaaaagacagctgcatctccaaccacactgttgtagaaataggtaaa
gaccttaactatcttaaagatgggaatggaactaccagtggcgtaggcagcagcgtggaa
aagtatgtcgtcgatgaaagtgattacatgtcattcataaacaatccaagtctcactgtg
acagtaccaattgctgtcggggaatcagatttcgaaaatttaaatacagaagagtttagc
agcgagtcagatctagaagaaagcaaagagaagctaaatgcatccagctcatctgaaggc
agtacagttgatattggacttcctcaagaaggagaacaaccagagatagaaccagaagaa
gctcttgaaccagaagcctgttttacagaaggctgcgtacggaagttcaagtgctgtcaa
gtcagcatagaagatgggaaaggaaaaatgtggtggaatcttaggaaaacctgctacaag
atagttgaacacaactggtttgagaccttcattgtcttcatgattcttctcagcagtggt
gctctggcttttgaagatatatatattgaacagcgcaagactattaaaaccatgctggaa
tatgctgataaggtcttcacttacatcttcattctggaaatggtgctaaaatgggtggct
tatggttttcaaatctatttcactaatgcctggtgctggctggacttcctgattgttgat
gtctctttgattagcttaacagctaatgccttgggctactcagaacttggtgcaattaaa
tcccttaggacattaagagctttgagacctctaagagccttgtcacgatttgaagggatg
agggtggttgtgaatgccctcttaggagcaattccatccattatgaatgtgcttcttgtt
tgtctgatattctggctaatcttcagcatcatgggagtaaatctgtttgctggcaagttc
taccactgtgttaataccacaactgatgagaggttcgatatcagccaaatcaacaattat
agtcaatgtgaggaacttataaaaaacaatgaaactgcccgatggaaaaatgttaaagta
aactttgataacgtaggactcggctatctgtctttgcttcaagtagccacatttaaagga
tggatggatataatgtatgcagctgtggattctcgaaatgtattggatcagcctaaatat
gaggacaacctgtacatgtatctttattttgtcatctttatcatctttggatcattcttc
accctgaaccttttcattggtgtcatcatagacaacttcaatcaacaaaaaaagaagttt
ggaggccaagacatctttatgacagaagaacagaagaaatattacaatgcaatgaaaaag
ctgggatccaagaaaccacaaaagcctatacctaggccagcgaacaaattccaaggcatg
gtctttgattttgtgacaaaacaagtatttgacatcagcatcatgatccttatctgcctt
aatatggtcaccatgatggtagaaacagatgaccagagtgacgagatgcaagataattta
tggtggattaacctggtgttcattgtgcttttcactggagaatgtatcctgaaactgatc
tcactccgttattactacttcaccataggctggaatatttttgattttgtagttgtcatt
ctttctatagtaggtatgtttctggctgacctgattgaaaaatattttgtgtcccccacc
ttgttcagagttatccgacttgccagaataggtcgaattctgcgtctcattaagggcgct
aaagggatccgtactctgctttttgctttgatgatgtctcttccagctttgtttaacatt
ggtctcctgcttttcctggtcatgtttatctatgctatatttggaatgtccaactttgcc
tacgttaagagggaagttggaattgatgacatgttcaactttgaaacttttggcaacagc
atgatctgcctatttcaaataactacatcagctggctgggatggtttgttagcaccaatt
cttaacagcggagaaccggactgtgaccctaataaagatcacccaggaagctctgttaaa
ggagactgtggtaacccttctgttgggattttcttttttgtcagttatattatcatatca
tttctagtcgtagtaaacatgtatattgctgttattttggagaacttcagtgttgctacg
gaagaaagtgcagagcccttgagtgaggatgactttgagatgttctacgaggtttgggaa
aagtttgatccagatgccacccagttcatagagttccataaactctctgattttgcagct
tctctggatcctcctcttcttatagcaaaaccaaacaaagttcagcttattgcaatggat
ctgcccatggtgagtggtgacagaattcactgcttggatatcttgtttgcttttacaaag
cgtgttttgggggaaagtggagaaatggatacacttcgaatacaaatggaagatcggttt
atggcagccaatccttctaaagtctcctatgaaccgatcacaaccacattaaagcgaaaa
caagaggaagtatctgctatcattattcagcgagctttcagacgttatcttttaaaacaa
aaaattaaaaaagtttcatgtatgtttaaccaagataaagataaagatgaggatgacctg
cctatcaaagaagatatgattattgataaactgaatgagaactccactccagaaaaaaca
gatatgaccccttctacaacttctccaccttcctatgatagtgtaacaaagccagacaaa
gagaaatatgaaaaagacaaatcggaaaaagaagacaaaggtaaagatgtcagggaaggt
aaaaagtaa
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