Carettochelys insculpta (pitted-shelled turtle): 142017126
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Entry
142017126 CDS
T11194
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like
KO
K04834
voltage-gated sodium channel type II alpha
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ciz04040
]
142017126
Ion channels [BR:
ciz04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
142017126
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
142017126
NCBI-ProteinID:
XP_074857884
LinkDB
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Position
8:39252156..39440370
Genome browser
AA seq
1984 aa
AA seq
DB search
MAKAMLVPPGPDSFFYFTRESLAAIEQRIAEEKVKQDNKDDDVSAKSIPKPHSDLEAGKV
LPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATPALYMLSPFHPVRKM
AIKILVHSLFSILIMCTILTNCVFMTLSNPPEWAKNVEYTFTGIYTFESLIKILARGFCI
DDFTFLRDPWNWLDFTVIAFAYLTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCLLWPLNVSTAESKFFINDTFDWE
AFLEEEKNFYTIEGQKDPLLCGNNSDAGQCPEGYICVKAGRNPNYGYTSFDTFSWAFLSL
FRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLILAVVAMAYEEQNQATLE
EAEQKEAEFQQMLEQLKKQQEAAQAIAEAAAELRDFGGEDRIFRVSESSSETSKLSSKSA
KERRNRRKKRRQRELSGGEDKMDDGKLPKSDSDGSIKRNGFRFPLEGSRLTHEKRFTSPD
QSLLSIRDALFSPRRNSKTSLFSFRDRLKDVGSENDFADDEHSIFEDNDSRRGSLFVPRR
HKRHNSNISQSSRSSRRRPLNGKMQSTVDCSGVVSLVDGQPSLLSPTGQLLPEVIIDKAT
TDDNSSPTGIEVKKRRSSSYKISMDLLEEPNIRQRAMSIASIITNTMEELEESRQKCPPC
WYKFANTFLIWDCWAPWLKIKHIVSLIVMDPFVDLAVTICIVLNTVFMAMEYYPMTTHFH
NVLSVGNLVFTGIFTAEMVLKIIAMDPYYYFQVGWNIFDGIIVTLSLVEPFLSNVDGLSV
LRSFRLLRIFKLAKSWPTLNKLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYK
ECVCKISEECKLPRWHMQDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMV
IGNLVVLNLFLALLLSSFSSDNLAATDDDNETNNLQIAVARIQKGTEYVKRKARECAQKI
FVRGLKDVGEIKSVGQLTNKEDTHTSNYTVAEMSRNLDNRKDENGIIGVIGNRDYTSFIH
NPSLTVTVPIAIGESDFEHLNTEDYSSESEPEEGKEKLNIDSSSEGSTIDVVSLGEEKAN
IESEEALEPTPCFTEGCVRKFKCCQVSLEDKKGKIWWNLRKTCYKIVEHNWFETFIVFMI
LLSSGALAFEDIYIEQHKTIKTVLEYADKVFTYIFILEMVLKWVAYGFQTYFTNAWCWLD
FLIVDVSLVSLIANALGFSEIGPIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIM
NVLLVCLIFWLIFSIMGVNLFAGKFFSCINTTSGDPFLPDQIRNKSECMALVKIRNDVLW
KNLKVNFDNVGAGYLSLLQVATFKGWMDIMYAAVDSVKTDMQPKYEENLYMYLYFVIFII
FGAFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPTN
KFQGLVFDIVTKQAFDISIMVLICLNMVTMMVETDDQSDEMNDILYWINLLFIVLFTGEC
VLKLISLRYYYFTIGWNIFDFVVVILSIIGMFLDKVIEKYFVSPTLFRVVRLARIGRILR
LIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSKFAYVKKEAGIDDMFNFE
TFGNSMICLFQITTSAGWDGLLAPILNSGEPDCDPNKDHPGSSVKGDCGNPSIGIFFFVS
YIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWEKYDPDATQFIQYSKL
SDFAASLDPPLLIAKPNTLQLIAMDLPMVSGDRIHCLDILFAFTKRVLGESDEMDALRIQ
MEDRFMAANPSKVSYEPITTTLKRKQEEVSATLIQRAYRSYLLRQMVKKVSFIYGKEERD
DLSIKEDMTLDKLSENSTAEKVDRTPSTTSPPSYDSVTKPDKDKYEKDKSEKEDKSKDMR
ERKK
NT seq
5955 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggcaatgctggtgccacctggacctgacagcttcttctacttcactagagag
tctcttgcagctattgagcagcgcattgctgaagaaaaggttaaacaagacaataaagat
gatgatgtcagtgcaaaaagtatcccaaagccacatagcgacttggaagcaggaaaggtg
ctcccatttatttatggtgacatacctccaggaatggtgtccgaacccttggaggacctg
gacccatattatatcaataaaaagacttttatagtattgaataaagggaaggcaatcttc
cgattcagtgccacacctgccttgtacatgttatctcctttccaccctgttagaaaaatg
gcgattaagattttggttcattcattattcagcatacttattatgtgcactattctgact
aactgtgtatttatgacattgagtaaccctccagagtgggcaaagaatgttgagtacact
tttactggaatttatacatttgaatcccttataaaaattcttgcaagaggcttctgtata
gatgattttacttttcttcgagacccttggaactggcttgattttactgtcattgcattt
gcatatctgacagaatttgtggacctgggcaatgtctcagcattgaggacattcagagtt
ctccgagcattgaaaacaatatcagtcattccagggttgaagactattgtgggagccctg
attcagtctgtgaagaagctctccgatgtaatgatcctgactgtgttttgtctgagtgta
tttgcactaatagggctgcagctgttcatgggcaacttgaggcacaaatgtttgctgtgg
cccttaaatgtatccactgctgaaagtaaattcttcattaatgacacatttgactgggaa
gcattccttgaggaggaaaagaatttttatactatagaaggacaaaaggatcccctgctc
tgtggcaataactccgacgcaggtcaatgtccagaaggatatatatgcgtgaaagctggt
agaaaccccaactatggctacacgagctttgacacgttcagctgggcgttcttgtcgttg
tttcgactgatgactcaggactactgggaaaatctttatcagctgactctacgtgctgct
gggaaaacatacatgatattttttgttctggtaattttcctgggctctttctatctaatt
aacttgatcctggctgttgttgccatggcctatgaagaacagaatcaagccaccttagaa
gaagcagagcagaaggaggcagagtttcagcagatgcttgaacagctgaaaaaacaacaa
gaagcagctcaggcaatagcagaagcagcagctgagttaagagattttggtggtgaagac
agaattttcagggtgtcagagagttcttcagaaacatccaagttaagctcaaaaagcgct
aaagaaaggagaaacagaaggaagaaaagaagacagagagagctttctggaggagaggac
aagatggatgatggaaaacttcccaaatctgattcagatggcagtatcaaaaggaacggt
ttccgttttcctttggaagggagtagactaacacatgaaaaacgtttcacttcccctgac
cagtctttgctgagtattcgtgatgccctgttttccccaaggcgcaacagcaaaacgagt
cttttcagcttcagagatcgcttaaaggatgtaggatcagaaaatgactttgctgatgat
gaacacagcatttttgaagataacgatagcagaagaggttctctttttgtgccacgcaga
cacaaacggcacaatagtaacattagtcagagcagtaggtcgtccaggaggcgtccactg
aatggaaagatgcaaagtactgtggattgcagtggagtggtttccctggttgatggacag
ccatcgctcttgtcgcctactggacagcttctgccagaggtgataatagataaagcaact
actgatgacaatagctcccctacaggaatagaagtaaagaagaggagatcaagttcttat
aaaatatcaatggatttgctggaagagccaaatataaggcagagagcaatgagtatagcc
agcataatcacaaacacaatggaagaacttgaagaatccaggcaaaagtgccctccatgt
tggtataaatttgccaacactttcttgatctgggactgttgggctccttggttgaaaata
aaacatattgttagtttgattgtgatggatccatttgttgaccttgctgttaccatctgc
attgtgttaaacacagtcttcatggccatggaatattacccaatgactacacacttccac
aatgtgctttcagtaggaaacctggtttttacaggcatcttcacagcagaaatggttctc
aagataattgcaatggatccctattattatttccaagtaggctggaatatttttgatggg
attattgttacccttagtttggtggaaccttttctttcaaatgtggatggactatcagtt
ctccgatcattcagattgttgcgaattttcaagttggcaaaatcttggcccacactaaat
aaactcataaagattattggtaactcagtgggggctttgggaaatttgacactggtgctg
gccatcattgtcttcattttcgctgtggttggtatgcagctgtttggtaaaagctacaag
gaatgtgtctgcaagatctcggaagaatgtaaacttccacgctggcacatgcaagacttt
ttccactctttcttgattgtattccgagtgctatgtggagaatggatagagactatgtgg
gactgtatggaagttgccggccaagctatgtgccttattgttttcatgatggtcatggtg
attggaaatctagtggtactgaacctgtttttggccttgctgctgagttcttttagttca
gacaaccttgctgctacagatgacgataatgaaacaaacaatctgcagattgctgtggca
aggattcagaagggaacagaatatgtgaaaaggaaagcacgtgaatgtgcccaaaaaatc
tttgtgagaggactaaaagatgtaggtgaaataaagtcagtgggtcagctaaccaacaag
gaagacacccacacttccaactatactgttgctgaaatgagcagaaatctggataatcgc
aaagatgagaatggaatcattggtgttataggcaaccgtgattatacatcattcatacac
aacccaagccttactgtaactgtaccaattgctattggggaatctgattttgaacattta
aatacagaagattatagcagtgaatcagagccggaggaaggcaaagagaaactaaatatt
gacagttcatctgaaggtagtacaattgatgtagtttcccttggagaagaaaaagcaaat
attgaatcagaagaagcattagaaccaacgccctgttttacagaaggctgcgtacggaag
ttcaagtgttgtcaagtcagcctagaagataagaaagggaagatctggtggaatcttcga
aaaacctgttacaagatagtggaacacaactggtttgagaccttcattgtcttcatgatt
ctcctcagcagtggtgctctggcttttgaagatatatatattgaacagcacaagactatc
aagactgtgctagaatatgctgataaggtcttcacttacatcttcattctggaaatggtg
ctaaaatgggtggcctatggttttcaaacctatttcactaatgcctggtgctggctggac
ttcctgattgttgatgtttctttggttagcttaattgctaatgctttgggattctctgaa
attggtccaattaaatcacttcgaactctacgagctttgagacctttgagagcattgtca
cgatttgaaggaatgagggtagttgtgaatgcccttttaggagcaataccatctatcatg
aatgtactactggtttgccttatcttctggctgatcttcagcataatgggagtaaattta
tttgctggcaagttcttctcctgtattaacaccacaagtggtgacccctttttaccagat
cagattaggaataagtctgagtgtatggctcttgtgaaaatcaggaacgatgtcctgtgg
aaaaatttgaaagtaaactttgataatgttggagctggctatctttctctgcttcaagta
gctacatttaaaggatggatggatattatgtatgcagctgttgattccgttaagacagac
atgcagcccaagtatgaagaaaacctgtacatgtatctttactttgtcatttttatcatc
tttggcgcattctttactttgaaccttttcattggtgtcatcatagataacttcaaccaa
caaaaaaagaagcttggaggtcaagacattttcatgacagaagaacagaaaaaatactac
aatgcaatgaaaaagctgggatccaaaaaaccacaaaaacctatacctaggccaacgaac
aaattccaaggtttggtgtttgatattgtaaccaaacaagcatttgatatcagcatcatg
gttcttatctgccttaacatggtcacaatgatggtagaaactgatgaccagagtgatgag
atgaatgatattttatactggattaacctgttgtttattgtcctttttactggagaatgt
gtcctcaaactaatttcactccgttattattacttcaccataggctggaacatttttgat
tttgtggttgtcattctttcaataataggtatgtttctagacaaggtgattgaaaaatat
tttgtgtcccccaccttgttcagagttgtccgactcgccagaataggtcgaatcttgcgt
ctcattaagggtgccaaaggaattcgcacgctgctttttgccttgatgatgtctcttcct
gctttgtttaacattggtctcctgcttttcctggtcatgtttatctatgctatatttgga
atgtccaagttcgcttatgttaagaaggaagctgggattgatgacatgttcaactttgaa
acttttggcaacagcatgatctgcctgtttcaaataaccacatcagctggctgggatggt
ttgttagcaccaattcttaacagtggagaaccagactgtgaccctaataaagatcaccca
ggaagctctgttaaaggagactgtggtaacccttccattgggattttcttttttgtcagt
tatatcatcatatcatttctagttgtcgtaaacatgtatattgctgttattttggagaac
ttcagtgtcgctacagaggaaagtgcagagcccttgagtgaggatgactttgagatgttc
tatgaggtttgggaaaagtatgatccagatgccacccaatttatacagtacagtaaactc
tctgattttgcagcttcgctggatcctcctcttctaatagcaaaaccaaacacacttcag
cttattgcaatggatctgcccatggtgagtggtgacagaattcactgtctcgacatcttg
tttgcttttacaaagcgtgttttgggggaaagtgatgagatggatgcgcttcgaatacaa
atggaagatcggtttatggcagccaatccttctaaagtctcctatgaaccgatcacaacc
acattaaaaagaaaacaagaggaggtgtctgctactcttattcagcgtgcttacagatct
taccttttaaggcaaatggtgaaaaaagtttcatttatatatggcaaagaagagcgtgat
gatctgtctatcaaggaagatatgactcttgataagctaagtgaaaactcaactgcagaa
aaagtagataggaccccctccacgacctctccaccttcctatgatagtgtaacaaagcca
gacaaagacaaatatgaaaaagataaatcagaaaaagaagacaaaagtaaagatatgaga
gaaagaaaaaagtga
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