Carettochelys insculpta (pitted-shelled turtle): 142017174
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Entry
142017174 CDS
T11194
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like
KO
K04834
voltage-gated sodium channel type II alpha
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ciz04040
]
142017174
Ion channels [BR:
ciz04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
142017174
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
Motif
Other DBs
NCBI-GeneID:
142017174
NCBI-ProteinID:
XP_074857978
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Position
8:40249561..40377610
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AA seq
1991 aa
AA seq
DB search
MAQALLVPPGPDSFRYFTRESLTAIEKRAAEEKAKKPKQEHADDDDENGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKTIFRFSATSALYILTPLNPVRK
IAIKILVHSFFSMLIMCTILTNCVFMTMSNPPEWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFSVIVMAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCLQWPPENSTFEVNITSYLNSTI
DINAHFYILEGQRDALLCGNSSDAGQCPEGYICVKAGRNPNYGYTSFDTFSWAFLSLFRL
MTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLVNLILAVVAMAYEEQNQATLEEAE
QKEAEFQQMLEQLKKQQEEAQATAAVAAVSVASRDLSGVGGLGELLESSSEASKLSSKSA
KERRNRRKKRRQKELSETEDKEDVDKFPKSESEDSIRRKSFRFSMEASRLTYEKRFTSPH
QSLLSIRGSLFSPRRNSRTSIFSFRGRAKDIGSENDFADDEHSTLEDNESRRDSFFAPNR
HGERRNSNISQTSMSSRMVPALPPNGKMHSTVDCNGVVSLVGGPPALTSPTGQLLPEGTT
TETEIRKRRLSSYQISMEMMEDSAARQRAMSIASILTNTMEELEESRQKCPPCWYRFANT
FLIWDCWSPWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSSVLTVGN
LVFTGIFTAEMVLKIIAMDPYYYFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLL
RVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKIS
DDCVLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMCLIVFMLVMVIGNLVVL
NLFLALLLSSFSSDNLAATDDDNEMNNLQIAVARIQKGIDYVKKKLREFVQKAFVRKQKV
LQEIKALEELNNKKDSCISNHTVIEISKDLNYFRDGNGITSGVGTGSSVEKYAIDENDYM
SFINNPGLTVTVPIAVGESDFENLNTEEFSSESEMEENKEKLNASSSSEGSTVDIAPPGE
GEQAEIEPEEALEPIACFTEGCVQKFTCCQVSIEDGKGKIWWNLRKTCYSIVEHNWFETF
IVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEMLLKWVAYGFQMYFTNA
WCWLDFLIVDVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALIGA
IPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNTTTGEMFDVSDVDNYTRCEELIKKN
ESARWKNVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVDSRDLLDQPKYEDNLYMYLYF
VIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPI
PRPANKFQGMVFDFVTKQGFDISIMILICLNMVTMMIETDDQSDEMETILQRINLVFIVL
FTGECVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAKVIEKYFVSPTLFRVIRLARI
GRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKREVGIDD
MFNFETFGNSMICLFQITTSAGWDGLLAPILNSGEPDCDPNKDHPGSSVKGDCGNPSVGI
FFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWEKFDPDATQFI
EYSKLSDFAASLDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRVLGESDEMD
ALRIQMEDRFMASNPSKASYEPITTTLKRKQEEVSATIIQRAYRCYILKQKVKKVSCMYS
KNKSKGDGLPVKDMVIDKLNENSTPEKTDESSSTTSPPSYDSVTKPNKEKYEKDKAEKDY
KGKNVRESKKK
NT seq
5976 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggcattgctggtaccaccaggacctgacagcttccgctattttactagagaa
tctctcacagctattgaaaagcgtgccgcagaagaaaaagctaaaaaacccaaacaagag
catgcagatgatgatgacgaaaatggcccaaaaccaaatagtgacttggaggcaggaaag
acactgccatttatttatggtgatatacctccaggaatggtgtccgagcccttggaggac
ctggacccatattatatcaataaaaaaactttcatagtactgaacaaaggaaagacaatt
ttccgattcagtgccacatctgccttgtacattttaactcctctcaaccctgttagaaaa
attgctattaagattttggtgcattcatttttcagcatgcttattatgtgcactattttg
accaactgtgtatttatgactatgagtaaccctccagagtggacaaagaatgtagagtac
acgttcactgggatttatacctttgaatctctaataaaaattcttgcaagaggcttctgt
ttagaagattttacttttcttcgagacccatggaactggcttgacttcagtgtcattgtg
atggcgtatgtaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcaga
gtattgagagctttgaaaactatttctgtaatcccaggcttgaagactattgtaggagcc
ctaattcagtctgtgaagaaactctctgatgtaatgatcctgactgtgttttgtctgagt
gtatttgcactaatagggctgcagctgttcatgggcaacttgaggcacaaatgtttgcag
tggcctccagaaaattccacttttgaagtaaacattacttcctatttgaacagcacaata
gacataaatgctcatttttacattttggaaggacaaagagatgccctactttgtggcaat
agctctgatgcaggtcaatgtccagaagggtatatatgtgtgaaagctggtagaaatccc
aattatggctacacaagctttgacacattcagctgggccttcttgtcactctttcgactg
atgactcaggacttctgggaaaacctgtatcagttgacgctacgagctgctggaaaaaca
tacatgatattttttgttctggtgatttttttgggatctttctatttggtgaatttgatc
ctggctgttgttgctatggcctatgaagaacagaatcaagcaaccctggaagaagccgag
cagaaggaggcagaatttcagcagatgcttgaacagctgaaaaagcaacaggaagaagct
caggcaacggcggcagtagcagcagtatcagttgcatcaagagatttgagtggagtaggg
ggattaggggagctcttggaaagttcctccgaagcatcaaagttgagctcaaagagtgct
aaagaaaggagaaatagaaggaaaaaaagaagacagaaggaactgtctgaaacagaggac
aaggaagatgttgacaagttccccaaatctgaatcagaagacagtatcagaagaaaaagc
ttccggttctccatggaagcaagtcgactgacatatgaaaagaggttcacttcccctcac
cagtctttgctgagcattcgtggctccctgttttccccaaggcgcaacagcagaacaagc
attttcagctttcgaggtcgagcaaaggatatcggatcagaaaatgattttgccgatgat
gaacacagcactcttgaagacaatgagagcaggagagattctttctttgctccaaacaga
catggtgaaagacgcaacagtaacattagtcaaaccagtatgtcatccaggatggtacca
gcgcttccaccaaatgggaagatgcacagcactgtagattgtaatggggtggtttctttg
gttggaggacctccagctctgacatcaccaaccggacaactactcccagagggtaccact
acagaaacagaaataagaaaaagaagactgagttcttatcaaatttccatggaaatgatg
gaagattctgctgcaagacaaagagcaatgagtatagccagcatactcacaaacacaatg
gaagaacttgaagaatccagacaaaaatgtccaccatgctggtacagatttgcaaacact
ttcttgatctgggactgctggagcccatggttaaaagtaaaacatatagtcaatttggtt
gtgatggatccatttgttgatcttgctattaccatttgcattgttctaaacacattgttt
atggccatggaacactacccaatgacggaacagttcagcagcgtgcttacagtgggaaat
ctggtatttactgggatcttcacagcagaaatggttttaaaaataattgccatggatcct
tattattatttccaagaaggctggaatatttttgatggtattattgtcagccttagttta
atggaacttggtcttgcaaatgttgaaggattatcagttctccgatcattcagattgctc
cgagtattcaagttggcaaaatcttggcccacattaaatatgttgattaagattattggt
aactcagtgggggctttgggaaatttgacgctggtgctggccatcattgtcttcattttc
gctgtggttggtatgcagctgtttggtaaaagctacaaggaatgtgtctgcaagatctcc
gatgactgtgtgcttccacgctggcacatgcatgactttttccactctttcttgattgta
ttccgagtgctatgtggagaatggatagagactatgtgggactgtatggaggttgctggc
caaaccatgtgccttattgttttcatgctggtcatggtcattggaaaccttgtggtatta
aacctgtttctggccttgctgctgagttcatttagttcagataatcttgctgctacagat
gatgataatgaaatgaacaatctacagattgctgttgcaaggattcagaagggaatagat
tatgtgaaaaaaaaattacgggaattcgtccaaaaagcctttgtgagaaagcaaaaagta
ttacaagaaatcaaagcacttgaagagctaaacaacaagaaagacagctgtatttccaac
catactgtcattgaaataagcaaagatctaaattattttagagatgggaatggaattacc
agtggtgtgggaacaggcagcagtgtggaaaaatatgcaattgatgaaaatgattatatg
tcattcataaacaatccaggcctcactgtaactgtgcctattgctgttggagaatcagat
tttgaaaatttaaacacagaagagtttagcagtgagtcggaaatggaagaaaacaaagag
aagctaaatgcatccagctcatctgaaggcagcacagttgatattgcccctcctggagag
ggagaacaagctgagattgaacctgaagaagctcttgaaccaatagcctgctttacagaa
ggttgtgtgcagaagttcacttgttgtcaagtaagtatagaagatggaaaaggcaaaatc
tggtggaatcttaggaaaacctgctacagcatagttgaacacaactggtttgagacattt
attgtcttcatgattctactgagcagtggtgcactggcttttgaggacatatatatagaa
cagcgcaagactatcaagactatgttggaatatgctgataaggttttcacatatatcttc
attctggaaatgcttctaaaatgggtggcctatggctttcaaatgtatttcactaatgcc
tggtgctggctggacttcctgattgttgatgtgtcgttggttagtctaatagccaatgcc
ctgggctattccgaacttggtgccattaaatcgcttaggacactaagagctttgagaccg
ctaagagccttgtcacgatttgaagggatgagggtggttgtgaatgccctgataggagca
attccatccatcatgaatgtgctactggtttgtctgatattctggctaatcttcagcatc
atgggagtaaatctgtttgctggcaagttctaccactgtgttaacaccacaactggtgag
atgtttgatgtcagtgatgttgacaattacacgcgatgtgaggagctcataaaaaagaac
gaaagtgcacgatggaaaaatgttaaagtgaactttgataacgtaggcgctgggtatctt
gccttgcttcaagtagctacatttaaaggatggatggatattatgtatgcagccgttgat
tcacgagatctactagatcagcctaagtacgaggacaacctgtacatgtacctctacttt
gtaatctttatcatctttggatcattcttcaccctgaaccttttcattggtgtcatcata
gacaacttcaatcaacaaaaaaagaagtttggaggtcaagacatatttatgacagaagaa
cagaagaaatactacaatgcaatgaaaaaattggggtccaaaaaaccacaaaaacctata
cctaggccagcgaacaaattccaaggcatggtctttgattttgtaacaaaacaaggattt
gacatcagcatcatgattcttatctgccttaacatggtcaccatgatgatagaaacagat
gaccagagtgatgagatggaaactattttacagaggattaacctggtattcattgtcctt
ttcactggagaatgtgtcctgaaattgatttcactccgttattactacttcaccatagga
tggaacatttttgattttgtggttgtcattctctccatcgtgggtatgtttctagctaag
gtgattgaaaaatattttgtgtcccccactttgttcagagttatccgacttgccagaata
ggtcgaatcctccgtctcattaagggtgctaaagggatccgtacactgctttttgctttg
atgatgtctcttcctgctttgtttaacattggtctcctgcttttcctggtcatgtttatc
tatgctatatttggaatgtctaactttgcctatgttaagagggaagttggaattgatgac
atgttcaactttgaaacttttggcaacagcatgatctgtctgtttcaaataaccacatca
gctggctgggatggtttgttagcaccaattcttaacagtggagaaccagactgtgaccct
aataaagatcatccaggaagctctgttaaaggagactgtggtaacccttccgttgggatt
ttcttttttgtcagttatatcatcatatcatttctagttgtggtaaacatgtatattgct
gttattttggagaacttcagtgttgctacggaagaaagtgcagagcccttgagtgaggat
gactttgagatgttctatgaggtttgggaaaagtttgatccagatgcaacccagtttata
gagtacagtaaactctctgattttgcagcttcactggatcctcctcttcttatagcaaaa
ccaaacaaagttcagcttattgcaatggatctgcccatggtgagtggtgacagaattcac
tgcttggatatcttgtttgcttttacaaagcgtgttttgggggaaagtgatgaaatggat
gcacttcgaatacaaatggaagatcggtttatggcatccaatccttcaaaagcctcctat
gaaccaattacaactacgttaaaacgaaaacaagaggaggtgtctgctactattattcag
cgtgcttacagatgttacattttaaagcaaaaagttaaaaaagtttcctgtatgtatagc
aaaaataaaagcaaaggggatggcctacctgtcaaagatatggttattgataaactcaat
gaaaactccactccagaaaaaacagatgagagctcctctacaacctctccaccttcctat
gatagtgtaacaaaaccaaacaaagaaaaatatgaaaaagataaagcagaaaaagactac
aaaggtaaaaatgtcagggaaagtaaaaaaaaataa
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