Carettochelys insculpta (pitted-shelled turtle): 142018758
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Entry
142018758 CDS
T11194
Symbol
CAPN1
Name
(RefSeq) calpain-1 catalytic subunit
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04141
Protein processing in endoplasmic reticulum
ciz04210
Apoptosis
ciz04217
Necroptosis
ciz04218
Cellular senescence
ciz04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
142018758 (CAPN1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
142018758 (CAPN1)
04217 Necroptosis
142018758 (CAPN1)
04218 Cellular senescence
142018758 (CAPN1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
142018758 (CAPN1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ciz01002
]
142018758 (CAPN1)
Enzymes [BR:
ciz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
142018758 (CAPN1)
Peptidases and inhibitors [BR:
ciz01002
]
Cysteine peptidases
Family C2: calpain family
142018758 (CAPN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_7
EF-hand_5
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
142018758
NCBI-ProteinID:
XP_074860898
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All DBs
Position
11:18435066..18496332
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AA seq
714 aa
AA seq
DB search
MSEEIITPVYCTGVSAQVQKQRAKDLGLGRHENAVKYLGQDFETLQNACLQNGTLFRDDT
FPPAATSLGFKELGPNSSKTYGIKWKRPTEMCSNPQFIVDGATRTDICQGALGDCWLLAA
IASLTLNDTILHRVVPHGQSFQNGYAGIFHFQIWQFGEWVDVVVDDYLPTKDGKLTFVHS
AEGSEFWSALLEKAYAKVNGCYEALSGGSTSEGFEDFTGGVTEWYELRKPPSDLFQIILK
ALERGSLLGCSIDITSAFDMEAVTFKKLVKGHAYSVTGAKEINYRGQTVNLIRMRNPWGE
VEWTGAWSDNSSEWNIVDPSVGQQLRVKMEDGEFWMSFQDFLREFSRLEICNLTPDALKS
RKFRKWNTTLCDGSWRRGSTAGGCRNYPATFWINPQFKICLEEVDDDDDDYNRESGCSFL
LALMQKHRRKERRYGKDMETIGFAVYEVPRELTGQSAVHLKRDFFVSNASRARSEQFINL
REVSTRFKLPPGEYIVVPSTFEPNKEGDFVLRVFSEKKAGTEEMDDQIQANLPDEKVLSE
SEIDESFKQLFKQLAGADMEISVAELQTILNKILSKHKDLRTKGFSTESCRSMVNLMDRD
GNGKLGLVEFNILWNKIRNYLVVFRKFDLDKSGCMSAYEMRMALDSAGFKLNKKLYELII
TRYAEPDLAVDFDNFVCCLVRLETMFRFFQALDTDKDGIVTFDLFKWLQLTMFA
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagaaatcatcacccccgtgtactgcacaggtgtctcggctcaggtccagaag
cagagggctaaggatctaggtctggggcggcatgagaatgcagtgaagtacttgggtcag
gactttgagacgcttcagaacgcatgcttgcagaatggaaccctcttccgagatgacacc
ttccctcctgcagccacctccttgggcttcaaagagttgggtccgaactcctccaaaacc
tacggaatcaagtggaagagacccacggaaatgtgttccaacccgcagttcattgttgac
ggagccacccgcacagacatctgccagggagccctcggtgactgctggctcctagctgct
attgcttccctcaccttgaatgataccatcctccatcgagtggtcccccatgggcagagc
ttccagaacggctatgctggcatcttccacttccagatttggcagtttggagagtgggtg
gatgttgtcgtggatgactatctgccgaccaaggatggcaagctgacctttgtacactcg
gcagaaggcagtgagttctggagtgcgctactcgagaaggcttatgccaaggtgaatggt
tgctatgaagctctgtctggaggaagcacctccgagggctttgaagacttcactggggga
gtcacagaatggtacgagcttcggaaaccccccagcgatcttttccaaattatcttgaaa
gctttggaaaggggatcgctgcttggctgctccattgatattacgagcgcttttgacatg
gaggctgtcacatttaaaaagctggtgaagggtcatgcttattcggtcacaggagccaaa
gagattaactaccggggacagacagttaatctaattcgaatgcgaaacccatggggagag
gtggaatggactggagcctggagtgataactcttctgagtggaacattgtggatccatct
gtgggacaacagctaagggttaaaatggaagatggggaattctggatgtccttccaagat
tttttgagagagttctcacggctggagatctgtaaccttaccccagatgcactgaaatca
cgcaagttccgcaagtggaacacaactctttgtgatggcagctggagacgggggagcaca
gctggaggctgcaggaattatccagctacattctggataaacccccagttcaaaatctgc
ctggaggaggtggatgatgacgatgacgactacaacagagaatcggggtgcagcttcctc
ctggcactcatgcagaagcaccgtcgcaaggagaggcgatacgggaaggacatggagacc
attggctttgctgtgtatgaggttcctcgtgagttgacaggccaatctgcagttcaccta
aagcgagatttcttcgtgtcgaatgcctcacgagctcgctcggagcagttcataaacctt
cgtgaagtcagcacgcgcttcaagttgcctccaggggagtatattgttgtgccttccacc
tttgaacccaacaaggaaggcgattttgtcctcagggtcttctcagagaaaaaagctgga
actgaggagatggatgatcagatccaggctaatcttccagatgagaaagtgctttctgaa
agtgagattgatgaaagtttcaagcaacttttcaagcagcttgctggagcggatatggaa
atcagtgttgcagaactgcagactatcctcaacaaaatcttaagtaaacataaagatctc
cggactaaagggttcagtactgagtcatgccgaagtatggttaacctcatggatagggat
ggaaatgggaaattaggactggtcgaattcaacatcctctggaacaaaattaggaattac
ttggttgtctttaggaagtttgatttagacaagtctggatgcatgagtgcctatgaaatg
cgaatggcactggactctgcaggctttaaactgaacaagaagctgtatgaattaatcatc
acccgttatgctgagcctgacttggctgttgacttcgataactttgtgtgctgtttagtg
cgactggaaaccatgttcagattttttcaagccctggacacagataaagatggaattgtc
actttcgacttatttaagtggttacagctaaccatgtttgcctga
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