Carettochelys insculpta (pitted-shelled turtle): 142019212
Help
Entry
142019212 CDS
T11194
Symbol
CACNA1C
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1C isoform X1
KO
K04850
voltage-dependent calcium channel L type alpha-1C
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04010
MAPK signaling pathway
ciz04020
Calcium signaling pathway
ciz04260
Cardiac muscle contraction
ciz04261
Adrenergic signaling in cardiomyocytes
ciz04270
Vascular smooth muscle contraction
ciz04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
142019212 (CACNA1C)
04020 Calcium signaling pathway
142019212 (CACNA1C)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
142019212 (CACNA1C)
09153 Circulatory system
04260 Cardiac muscle contraction
142019212 (CACNA1C)
04261 Adrenergic signaling in cardiomyocytes
142019212 (CACNA1C)
04270 Vascular smooth muscle contraction
142019212 (CACNA1C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ciz04040
]
142019212 (CACNA1C)
Ion channels [BR:
ciz04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
142019212 (CACNA1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
CAC1F_C
DUF4834
Motif
Other DBs
NCBI-GeneID:
142019212
NCBI-ProteinID:
XP_074861881
LinkDB
All DBs
Position
1:complement(261030666..261842673)
Genome browser
AA seq
2193 aa
AA seq
DB search
MFQAFVRQTTSAYRPLPSHLPGEPEVKYKGKLVHETQLSCFYIQPGGSNYGSPRPAHANM
NANAAAGLAPEHIPTPGAALSWQAAIDAARQAKLMGSAGNATISTASSTQRKRQQYGKQK
KQGTTTATRPPRALLCLTLKNPIRRACISIVEWKPFEIIILLTIFANCVALAIYIPFPED
DSNATNSNLERVEYLFLIIFTVEAFLKIIAYGLLFHPNAYLRNGWNLLDFIIVVVGLFSA
ILEQATKADGTNSIGGKGAGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLH
IALLVLFVIIIYAIIGLELFMGKMHKTCYSTTSGLIDPSGDEEASPCALPSAHGRQCPNG
TECRGDWEGPKHGITNFDNFAFAMLTVFQCITMEGWTDVLYWMQDAMGFELPWVYFVSLV
IFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDP
ENEDEGMDEEKPRNMSMPTSETESVNTDNVAGADIEGENCGARLAHRMSKSKFSRYWRRW
NRFCRRKCRAAVKSNIFYWLVIFLVFLNTLTIASEHYKQPDWLTEVQDTANKVLLALFTA
EMLLKMYSLGLQAYFVSLFNRFDCFIVCGGILETILVETKIMSPLGISVLRCVRLLRIFK
ITRYWNSLSNLVASLLNSVRSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDEMQPRRSTF
DNFPQSLLTVFQILTGEDWNTVMYDGIKAYGGPSFPGMLVCIYFIILFICGNYILLNVFL
AIAVDNLADAESLTSAQKEEEEEKERKKLARTASPEKKQEIEKTAVEEETKEEKIELKSI
TADGESPPTTKINVDDYQPNENEEKNPYPTSEAPAEEEEEEPEMPVGPRPRPMSELHLKE
KAVPMPDASAFFIFSPTNRFRLHCHRIVNDNIFTNLILFFILLSSISLAAEDPVRHQSFR
NQIIFYFDIVFTVIFTIEIALKMTAYGAFLHKGSFCRNYFNILDLLVVSVSLISFGIQRS
SAINVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMFACIGV
QLFKGKLYKCSDESKQTEAECKGHYISYKDGDVTKMMIHTRLWENSKFNFDNVLKAMMAL
FTVSTFEGWPELLYRSIDSHMEDFGPIYNHRVEISIFFIIYIIIIAFFMMNIFVGFVIVT
FQEQGEQEYKNCELDKNQRQCVEYALKARPLRRYIPKNQYQYKVWYVVNSTYFEYLMFVL
ILLNTICLAMQHHRQTCDFKDAMNILNMLFTGLFTVEMVLKLIAFKPKGYFSDPWNVFDF
LIVIGSIIDVILSETNHYFCDAWNTFDALIVVGSIVDIAITEVNPAENSHCPSSTNGEEN
SRISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQ
VFGKIALNDTTEINRNNNFQTFPQAVLLLFRCATGEAWQDIMLACLPNQTCDPDSEPANS
TESEPSCGSTFAIFYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRI
WAEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVMFNA
TLFALVRTALRIKTEGNLEQANEELRAIIKKIWKRTSMKLLDQVVPPAGDDEVTVGKFYA
TFLIQEYFRKFKKRKEQGLVGKPSQRNALSLQAGLRTLHDIGPEIRRAISGDLTAEEELD
KAMKEAVSAASEDDIFRRAGGLFGNHVSYYQSDGRSSFPQTFTTQRPLHINKSGNNQGDT
ESPSHEKLVDSTFTPSSYSSSGSNANINNANNTALSRFPSPPSYPSTVSTVEGHGTPLSP
TIRVQEAPWKLNSKSSCSRDSQLAIVCQEEVSQDETYDENLNEDIEYCSEPSLISTEMLS
YQDDENRQLTPPENKGEGSKLSPKKGFLRSSSLGRRASFHLECLKRQKNQGVDVSQKTVL
PLHLVHHQALAVAGLSPLVQRSHSPASFSPRLCATPPAVTCSRDWPQKTIPTLRLDGVES
SEKLNSSFPSVRCSSWYSDSTSCSTPRRARPVSLTVPSQTGGSSRQFHGSAGSLVEAVLI
SEGLMQFAQDPKFIEVTTQELADACDMTIEEMENAADNILNGNSKQSPNGNLLPFANCRD
PGQDSAGEEEVQNPDCRKSQEELQDSRIYVSSL
NT seq
6582 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagcctttgttcggcaaaccacttcagcatatcgcccactgcccagccatctg
ccaggtgaacctgaggtgaagtacaagggcaagttggtgcatgaaactcagcttagctgc
ttctacatccaacctggaggttccaactatgggagtccccgtccagctcatgccaacatg
aatgcgaatgcagcagcagggcttgccccggagcatatccctactccaggggcagctctg
tcctggcaggctgctatcgatgctgccaggcaggccaaattgatgggtagtgctggcaat
gcaacaatatctactgctagctccacgcagaggaaacgacagcagtatgggaaacagaaa
aaacagggtacaaccacagctacacgtcctccccgggcactgctgtgtttaacgctgaaa
aatcccatccggagggcatgcatcagtattgttgaatggaaaccatttgaaataattatt
ttactgactatttttgccaattgtgtggccttagctatctatatcccctttccagaagat
gattccaatgccaccaattccaatctggaacgagtggaatatctctttctcataattttt
acagtggaagcatttttaaaaataatagcatatggacttctctttcaccccaatgcttac
ctccgcaatggctggaatttactagattttataattgtggtagtagggctttttagtgca
attttagaacaagcaaccaaagcagatgggacgaattcaataggagggaaaggtgccgga
tttgatgttaaagcactgcgagctttccgagtgttacgtcccttacgactggtatctgga
gttcctagtctccaggtggttttaaattccattatcaaggctatggtccccttgctgcac
attgccctgctggtgctgtttgtcataattatctatgccatcattgggctggagctattc
atggggaagatgcacaagacctgctactcaacgaccagtggtttaatagatccatctgga
gatgaagaggcctctccctgtgcccttccatcagcacatggacgacagtgtccaaatggc
actgaatgcagaggagattgggaaggaccgaagcacggcattaccaattttgacaacttt
gcttttgccatgttaactgtgtttcagtgcatcactatggagggctggacagatgtactg
tactggatgcaggacgctatgggctttgagttaccatgggtgtattttgtcagtctggtc
atctttggatcctttttcgttctaaatctggttctcggtgtgttgagcggagagttttcc
aaagaaagagagaaggcaaaagctcggggtgactttcagaagttgcgggagaaacaacag
ctggaggaagacttgaagggatacctggattggataactcaagcagaagacatcgatcca
gaaaatgaagatgaaggaatggatgaggaaaaaccccgaaacatgagcatgcctaccagt
gagactgagtccgtgaacacagacaacgtggctggagcagatattgaaggagaaaactgc
ggggctaggctggcgcatcggatgtccaaatctaagtttagccgctactggcgccggtgg
aacaggttttgcagaaggaagtgccgagctgctgtcaagtccaatattttctactggctg
gtgatcttccttgtatttctcaacaccctgaccattgcctctgaacactacaaacagcca
gactggctcactgaggttcaagacactgccaataaggtgctgctggctcttttcacggca
gagatgctgctgaagatgtacagcttaggtctccaggcctactttgtgtctctcttcaac
cgttttgactgctttattgtttgtggaggaatcctggagaccatcctggtggagaccaag
atcatgtcaccactgggcatctcggtgctgagatgcgtccgactcctgcgaatatttaaa
atcacaaggtattggaactctttgagtaacctagtggcttcgctgctgaactcagtccgt
tccattgcttccctgttgctgcttctcttcctcttcatcatcatcttctcactgctggga
atgcagctctttgggggcaagtttaacttcgatgagatgcaaccccggaggagcacattt
gataacttcccccagtccctcctcactgtatttcagatcctgactggggaggactggaat
acggtgatgtatgatgggatcaaggcttatggcggcccctcttttccaggaatgttggtc
tgtatttacttcatcatcctcttcatctgtggaaactatatcctgctgaatgtcttttta
gccatcgctgtggacaatcttgccgatgctgagagtttgacatctgctcaaaaagaagag
gaagaggaaaaagaaaggaaaaaactagctaggactgctagtcctgaaaagaaacaggag
attgaaaagacagctgtggaggaagagacaaaagaggagaaaattgagttgaaatcgatc
actgctgatggagagtccccacctactaccaagatcaacgtggatgattatcagcccaat
gaaaatgaagagaagaacccatatcctacttctgaagctccagcagaggaagaggaggag
gagcctgaaatgcctgttggcccccggccacgcccgatgtctgaactgcacctcaaagag
aaggctgtgcccatgccagatgccagtgctttcttcatcttcagccctaccaacaggttt
cgtctccactgccatcgaatcgttaacgataacattttcaccaacctgatcctctttttc
atcttgctcagcagcatctccctggcagctgaggatcctgtccgacaccagtcctttagg
aaccaaattatcttttattttgatatagtttttactgtcattttcaccattgaaattgct
ctgaagatgaccgcgtatggagcttttctccacaagggctccttctgcaggaactacttc
aacatcctagacttgctggtggtcagcgtttctctcatctcctttgggatccagaggtcc
agtgccatcaatgtagtgaagattttgcgtgtcctgcgagtgctcagaccactgagggcc
atcaacagagccaagggactaaagcacgtggtccagtgtgtatttgtagccatcagaacc
atcggaaacattgtgatcgtcaccactttgctgcagttcatgtttgcctgcattggagtt
caattgttcaagggcaaactgtataagtgcagtgatgaatctaagcaaacggaagctgaa
tgcaaggggcattacatttcttacaaagatggagacgtcactaaaatgatgatccatacc
cgcctctgggagaacagcaagttcaacttcgacaacgtcttgaaagccatgatggcgctc
ttcactgtttcaacctttgaaggctggccagaactgctgtaccgctccattgattctcac
atggaagactttggacccatctataaccacagagtggagatttcaatttttttcattatc
tacatcatcatcattgcattcttcatgatgaacatcttcgttggtttcgtcattgtcacc
tttcaggagcaaggagaacaggagtacaagaactgtgaactggacaagaatcagcgtcag
tgtgttgagtatgccctgaaggcccgtcccctacgaaggtacatccctaagaaccaatac
caatacaaagtgtggtatgtggtgaactccacctattttgagtacctgatgtttgtcctg
atcctgctgaacaccatctgcctggccatgcagcatcatcgtcagacctgtgacttcaaa
gatgccatgaatatcctcaacatgctcttcaccggcctcttcactgtcgagatggttctg
aagttaattgccttcaaacccaagggttactttagtgatccttggaatgtttttgacttc
ctcatcgtaattggcagcattatagacgtcattctcagtgaaactaatcactatttctgt
gatgcatggaatacatttgacgccttgattgttgtgggtagcattgttgatatagcaatc
accgaggtgaacccagctgaaaattcccactgcccttcctctacgaatggagaggaaaac
tcgcgcatctcaatcacctttttccgactcttccgtgtgatgcgtctcgtgaagctcctg
agccgaggggaaggcatccggacattgctttggaccttcatcaagtccttccaggccctc
ccctatgtggctcttttaatcgtgatgttattcttcatctatgcggtgattggaatgcag
gtgtttggtaaaattgctctgaatgacaccacagagatcaaccgcaacaacaactttcag
acgttccctcaagcagtgctgctactcttcaggtgtgccactggtgaagcctggcaggat
atcatgcttgcatgtctgccaaatcagacgtgtgatcctgactccgagccagccaactct
actgaaagcgagccttcctgtgggagcacctttgccatcttttacttcatcagcttctac
atgctctgtgccttcttgatcattaatctttttgtagctgttattatggataactttgac
tacttgacacgggactggtccattctggggccacatcacctggatgagtttaaaaggatc
tgggcagagtatgacccagaagccaagggacgaatcaaacacctggatgtggtgacgctg
ctccggcggattcagcctcctctgggctttgggaagctttgtccacatcgagtggcttgc
aaacgtctagtttctatgaatatgccactgaacagtgatgggacagtcatgtttaatgcc
accctctttgccttggtcagaacagcactgaggatcaaaaccgaaggtaacctggagcaa
gccaatgaggagctgcgagcgatcattaagaaaatctggaagcgcaccagcatgaagctg
ctggatcaggttgtgcccccagcaggcgatgatgaggtcactgttgggaagttttatgcc
actttcctgatccaagagtatttccggaagttcaagaaacgtaaagaacaaggccttgtg
ggcaaaccttcacaaaggaatgctctctccttgcaggctgggttacgcacattgcatgat
attgggccagagatccgacgggcgatctcaggagacctgacagctgaggaggagctagac
aaggccatgaaagaagctgtttctgctgcctctgaagatgatatcttcaggagggctggt
ggcttgtttggaaaccatgtcagctactaccaaagtgatggcaggagttcgtttccccag
acgttcaccacccagcgccctttgcatatcaacaaatctggcaacaaccagggagatact
gaatccccatcacacgagaagctagtggattccaccttcactcctagcagctactcatca
tcaggctccaacgccaacatcaacaatgccaacaacactgccttgtctcgcttccccagc
ccgcccagctacccaagtactgtcagcacagtggaggggcatggcacaccattgtcacca
accatacgagttcaggaggccccttggaaactcaattccaaaagctcctgttccagagac
agccagctggcaatcgtttgccaagaggaagtgtctcaggatgagacttatgatgagaat
ttgaatgaagacatcgagtactgtagcgaaccaagcctgatctctactgaaatgctctcg
taccaagatgatgaaaaccggcaactgactccacctgaaaacaaaggggagggctccaag
ctatctccaaagaaggggtttcttcgctcctcatcactgggtcgaagagcatcttttcac
ttggagtgtctgaagagacagaagaatcaaggtgtagatgtctcacagaagacagttctg
ccattgcacctggtacaccatcaggcattagcggtggcagggctgagtcccctggtccag
agaagccattccccagcaagtttctcccctcggttgtgtgccacaccccctgctgtgacc
tgtagccgtgactggccacagaagaccatcccaactttgcggcttgatggagtggagtcc
agtgagaaacttaatagtagcttcccatcagtacgctgcagctcctggtactctgacagc
accagctgcagcacccctcggagagccaggccagtctccctcaccgtccccagccagact
ggagggagtagcaggcagtttcacggcagcgctggcagccttgttgaagcggtcttgatt
tcagaaggactgatgcagtttgctcaagatccaaagttcattgaggtcacaacccaagag
ctagcagacgcctgtgatatgacaatagaagagatggaaaatgcagccgacaacatactc
aatggtaacagcaagcagagccccaatggcaacctcttgccttttgctaactgcagggac
ccagggcaggacagtgcaggagaggaagaggtgcagaacccggattgtagaaaaagtcag
gaagagctccaggacagcaggatttatgtcagcagcctgtag
DBGET
integrated database retrieval system
