Carettochelys insculpta (pitted-shelled turtle): 142019364
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Entry
142019364 CDS
T11194
Symbol
XPC
Name
(RefSeq) DNA repair protein complementing XP-C cells isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
142019364 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ciz03400
]
142019364 (XPC)
DNA repair and recombination proteins [BR:
ciz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
142019364 (XPC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
142019364
NCBI-ProteinID:
XP_074862269
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Position
11:complement(29487959..29512025)
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AA seq
959 aa
AA seq
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MAKKRKGSLQQETASKKFKAESAAAASRALQALRQKGEDDFEEEKPSTKMNLLKDPGGNK
KKKRACDSGGHSQPGRSSRQKGAKSTEKEKNNISVKNGGNLNKGEMCSALPSSSHQETTL
KRQPAIKKEREDNEDDDDGGDGSEDEWEDVEELEDPVLDKSGEAGALPALVLPSKPVEIE
IETPEQAKKRERREKRKAEFEIYLRRMMKRFNKEVREDTHKVHLLCLLANGFYRNRVCNQ
PDLQAIGLSIIPIHFTKVPADRVDLLFLSNLVKWFIATFTINSELSVDDRESLQSTLERR
FAIYAARDDEELVHIFLLILQALQLLCRLVLSLQPIRLKELSGKGKHSSKKHSAKTPKAP
SRKISCKGAKQQEMPESEDADQKGNTSGTKRTSKSKRIKGIQEQKESRNDESNQGEEEGA
HRSRKSCRRRVTLNKSYKEESGSEEDSDSEFEASEEEEEDSHFSDEDFETETVSKKQKRS
SGPHKSRMAVENSRKARSLETKGPKSSGGNEQLLAKAASPGSSNTPRKKNKIISSDDDDG
EQEVEKVTGTDQWLEVFVEREDRWVCVDCVHGIVGQPTLCFKYATKPVSYIVGIDTNGHV
KDVTQRYDPGWMTSTRKCRVDPQWWEDTLKPYKSRFVEREKKEDREFLVKLQDQPLPTSI
GEYKNHPLYALKRHILKYEAIYPETAAILGYCRGEAVYSRDCVHTLHSRDTWLKQARVVR
IGEVPYKMVKGFSNQARKARLAEPSNREKEDLALFGLWQTEEYQPPVAVDGRVPRNEYGN
VYLFLPCMLPIGCVQLKLPNLHRVARKLDIDCVQAITGFDFHGGYSHPVTDGYVVCEEYK
EVLVAAWENEQAEIEKREKEKREKRALGNWKLLAKGLLIRERLKQRYCKKSEASGSMMEK
GAGFSSDEGEPSTETPAEDVLVSWPQNRQVEEQRKEKKGRKTKREKKGEAAHLFPFEKL
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggctaagaagcgcaaaggttccctgcagcaagagactgcgagcaagaaattcaaggca
gagtctgctgcagcagccagcagggccctccaagctctcaggcaaaaaggagaggatgac
tttgaggaggaaaagcccagtactaagatgaatctcttaaaagatcctggtggaaataag
aaaaaaaaaagagcttgtgactctggtggtcatagccagccaggtagatcttcaagacaa
aaaggagcaaaatcaacagagaaggagaaaaataacatatctgtaaaaaatggagggaat
cttaacaaaggggaaatgtgtagtgctttaccaagctcctctcaccaggagacaactttg
aagagacaaccagctattaaaaaagaaagggaggacaatgaagatgatgatgatggcgga
gatggaagtgaggatgagtgggaggatgtggaagaacttgaagatcctgtcctggataag
tcaggagaagctggtgcccttcctgcactggtgctgcccagcaaaccagttgagatagaa
attgaaactccagagcaggcaaagaaaagagagagaagagagaaaagaaaagccgagttt
gagatctatctccggagaatgatgaaacgcttcaacaaggaagttcgtgaagacacacat
aaggttcacctgctttgtttgctagcaaatggtttctacaggaacagggtctgcaaccag
ccagatctccaggccattggcctttccatcattcccatccacttcactaaagtgcctgca
gatcgtgtagaccttctcttcctctccaacttggtgaaatggtttattgcaactttcact
atcaacagtgaactctctgttgatgatcgagagagcctgcagtccactttagagaggcgc
ttcgctatctatgctgcaagagatgatgaagagttggtccatatattcttacttattctg
caagcattacagttgctgtgccggcttgtgctgtctctgcaacccattcggctgaaagag
ctatcgggaaagggcaagcattcttctaagaagcattctgccaaaacccccaaggctcca
tccaggaaaatctcctgcaaaggagccaaacaacaagagatgccagagagtgaagatgct
gaccagaaaggaaacacctctggaaccaaaaggacaagtaaatcaaagcgaatcaagggc
atccaggaacaaaaggaatccagaaatgatgagagcaaccagggagaagaggaaggagcc
cacaggtccagaaaaagttgcagacgtagagtgaccttaaataaatcttacaaagaggag
agtggaagtgaggaagacagtgactctgagtttgaggcttcggaagaggaggaggaggac
agtcatttttctgatgaggattttgaaactgaaactgtctctaagaagcagaaaagatca
tcagggccccacaaatcaaggatggcagttgagaacagcaggaaagccaggtctttggaa
acaaaggggcccaagagttcaggtggaaatgagcaactgctggcaaaagcagcttctcca
ggctcttctaatacaccgaggaagaagaacaaaatcatctcgagtgacgatgatgatggg
gagcaggaagtggagaaagtgacaggcacagatcagtggctggaagtctttgttgagcgg
gaagataggtgggtatgtgtggactgtgttcacggcatcgttggtcagcccactctgtgt
ttcaaatatgccaccaagccagtttcctatattgtggggattgacaccaatgggcatgta
aaggatgtaacacaaaggtacgacccaggatggatgacctcaacaaggaaatgtcgtgtg
gatccccagtggtgggaagatacactgaaaccatataaaagccgttttgtggaaagagag
aagaaagaagacagagagtttctagttaagcttcaagaccagccattgccaacatccatt
ggagagtataaaaatcacccactttatgcactgaagaggcatatcctgaaatatgaggcc
atctatcctgagactgctgctatcctaggatactgcagaggagaggcagtatattccaga
gactgtgtgcacacactgcattcccgggacacctggctgaagcaagctcgagtggtaagg
attggggaagtgccctataagatggtgaaaggattttcgaaccaggcaaggaaagcacga
ctggcagagccttcaaacagggagaaagaggatttggcactgtttggcctgtggcagaca
gaggagtaccagcctcctgtggcagtggatggaagggttccccggaatgaatatggaaat
gtgtatctcttcctgccctgtatgttaccaataggctgcgtgcagctaaagcttcccaac
ctgcatagagtggcacgcaaactggatattgactgtgttcaagccatcaccggatttgat
tttcatggtggctactcacacccagttactgatggctatgtagtctgtgaagaatacaaa
gaggtgctcgttgcagcctgggagaatgaacaggcagagatagaaaaaagggaaaaggag
aaaagagagaagagagcactggggaactggaaattgctggcaaaaggacttctcataaga
gagagactgaagcaacgttactgcaagaagagtgaggcatctggatctatgatggagaaa
ggagctggattctcttctgatgaaggggaaccaagcacagagactccagctgaagacgtg
cttgtttcttggcctcagaatcggcaagtagaggaacaaagaaaagagaaaaaaggcaga
aagaccaagcgggaaaagaaaggagaagcagcacacttgttcccctttgagaagttgtga
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