Carettochelys insculpta (pitted-shelled turtle): 142024433
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Entry
142024433 CDS
T11194
Symbol
PHF1
Name
(RefSeq) PHD finger protein 1
KO
K11467
PHD finger protein 1
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
142024433 (PHF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ciz03000
]
142024433 (PHF1)
03036 Chromosome and associated proteins [BR:
ciz03036
]
142024433 (PHF1)
Transcription factors [BR:
ciz03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
142024433 (PHF1)
Chromosome and associated proteins [BR:
ciz03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
142024433 (PHF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mtf2_C
Tudor_2
PHD
Prok-RING_1
DUF4537
Chromo
PHD_ash2p_like
ASH2L-like_WH
Motif
Other DBs
NCBI-GeneID:
142024433
NCBI-ProteinID:
XP_074872534
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All DBs
Position
22:11441573..11450066
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AA seq
576 aa
AA seq
DB search
MASEPTAQTSRVTRTSSRLTSGPWKCPAAPAAAVAPSRPRFWEGQDVLARWTDGLLYLGT
IKKVDAARQVCLVQFEDNSQFLVLWKDINPAAVPGEEQICCVCYLESVSPENELVRCEKC
GHTYHQECHLPRVLDASCEGAGVLGTWMCRQCVFAVATKRGGALKKGPYAKAMLSMKLVL
PYQLKVLEWDPAHLTNRQQCYCYCGGPGEWNLKMLQCCSCAQWFHEACTQCLSKPLLYGD
RFYVFECCVCTGGPESVRRLPLRWVDVAHLILYHLSICCKKKYFDFEREILPFASENWDN
LLLGELSDTPKRDRYSQLLSALSSHKERFISGKEIKKRKGLFGLHTRVPPPVPQCSGSHT
DSTVRQPPLADSSFLSGQGSSGAGRRRPRRRKVPLEPTDTMELRSSREKWQLDRALTQEV
VETPVSASQTYCGYSGTSSTYNFRRTDARCLESAPIRMFASFHPSANTARTLRSTTASLD
PREVPALESESPEHPPAHTPIPQGKCPTPSIKHQPEPLSSPSSSSSLCPGPAPTTSSYFG
AMGRLARGEAVRILARRVTLDGTVQYLVEWGGGSMF
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgagccaactgctcagacttcccgggtgacacgcacgagctcccgtctgacc
tcgggcccctggaaatgcccagctgccccagccgctgctgtggctcccagtcggccccgc
ttctgggaaggacaggatgtgctggctcgctggaccgacggcttgctttacctgggtacc
atcaagaaggtggatgcagcaaggcaggtttgtctggtgcaatttgaggacaattcccag
ttcctggtgctctggaaggacattaaccccgctgctgtgccaggtgaggagcagatctgc
tgtgtttgttacttagagtctgtgagtccagagaacgagttggtgcggtgtgagaaatgt
gggcacacttaccaccaggagtgccacctgcccagagtgttggatgcgagctgcgaaggg
gctggagttcttggcacatggatgtgtcggcagtgcgtctttgctgtggccaccaaaagg
ggtggtgcactcaagaaaggcccctatgccaaggccatgctgagcatgaagctggtactg
ccctatcaactcaaagttttggagtgggatcccgcacacctgaccaatcggcagcagtgc
tactgctactgtggaggccctggagagtggaacctgaagatgttgcagtgctgcagctgt
gcccagtggttccatgaggcatgtacccagtgtctgagcaagccattgctttacggagac
agattttatgtctttgagtgctgtgtctgcactggtggcccagagagcgtacggagactt
cccctgagatgggtggatgtggcccatctcattctctatcaccttagcatctgctgcaaa
aaaaaatactttgactttgagcgcgagatcctgccttttgccagcgagaactgggacaac
ctgttgctgggagagctctcggatacacccaagagggacaggtacagccaattgctgagt
gccctgagcagccacaaagagagatttatttcagggaaggaaatcaagaagcggaagggt
ctctttgggcttcacacacgagtgccacctcctgtacctcagtgctctggcagccatact
gactccacagtccggcagcccccacttgctgacagtagcttcctttcagggcagggcagc
agtggggcagggcgccgaaggccccggaggcgcaaggtccccctggaacccacagatacc
atggagctgaggagcagcagggagaagtggcagctggacagagccctcacccaggaggtg
gtggagactccagtcagtgctagccagacatactgtggctacagcggcacctccagcacc
tacaacttccgccgcactgatgcccgttgcctggagagtgctcccatcaggatgtttgcc
tccttccacccatccgccaacactgcccggaccctgaggagcaccacggccagcttggat
ccccgtgaagtacctgccctggagagtgagagccctgagcacccccctgcccacactccg
atcccacaggggaagtgcccaacccccagtatcaagcaccagcccgaacccttgtcctcc
ccatcctcctccagttctctgtgcccaggccctgcccccaccaccagcagctactttgga
gctatggggcgcctggcccgaggggaggctgtccgcattctggcccgaagggtcacctta
gatggcactgtccagtacctagtggaatggggtggagggagcatgttttga
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