Cellvibrio japonicus: CJA_1277
Help
Entry
CJA_1277 CDS
T00721
Symbol
pelC
Name
(GenBank) pectate lyase III
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cja
Cellvibrio japonicus
Pathway
cja00040
Pentose and glucuronate interconversions
cja01100
Metabolic pathways
cja02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cja00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CJA_1277 (pelC)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CJA_1277 (pelC)
Enzymes [BR:
cja01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CJA_1277 (pelC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
ACE86187
UniProt:
B3PCG0
LinkDB
All DBs
Position
complement(1485468..1486994)
Genome browser
AA seq
508 aa
AA seq
DB search
MFQTHVFRGLPFAIKSAVLATALLVGNSASAAATAGFSTTDGGNVTGARSFSASTYEQIN
TIIANAKLDDNGKKVTGGAYPVIITYTGNEDALISQVIRDHTVDSSGNCPKARWNDAYRY
VEIKEFTKGVTIQGANGSSANFGIVINKSSNVIVRNMKIGALAGANNDADMIRIDSGVNV
WIDHNELFAVNNECKGSPDGDLTFESAIDIKKSSQDITVSYNYIHDVKKVGLDGSSSSDI
AGGRKITFHHNVYRNVNARLPLQRGGWIHVYNNLYDGITDSGINVRQAGYALIESNWFQN
AKNPITCRYDSSNCGFWDLRNNNVRNPGDFATYNITWSSGGTIDATNWTTTQPFPISLPY
SYSPVSAQCVKDKLEQFAGVGKNNAQLTSSACGGSTSSTPVSSSSSSRSSSSVAVSSSSS
SSSSSAAVSSSAGSAPVLSGTGDYPSGFSKCADLNGTCSVESGDGWVAFGRKGKWVTKRV
SVPGTIACTVAAFGSDPGGNPNKCSYKR
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaactcacgtattcagaggtttgccttttgctatcaaatccgcagtccttgcc
acagccctgcttgttggcaactctgcatctgcagccgcaaccgcaggtttctccacgacg
gatggcggtaacgtaacaggggctcgatcgttcagcgcatcgacctacgagcaaatcaac
accattattgccaacgccaagctggatgataacggcaagaaagtcactggtggtgcttac
cccgttatcattacctacaccggtaacgaagatgccctcatcagccaggtgatccgcgac
cataccgttgactcgtcaggcaactgtcccaaggcgcgctggaatgatgcttaccgctat
gtagaaatcaaggaattcaccaagggtgtcaccatccagggcgccaacggctcttccgcc
aacttcggtatcgttatcaataaatccagcaatgtgattgtgcgtaacatgaagattggt
gccctggcaggtgctaataacgatgctgatatgatccgtatcgacagcggtgtgaacgta
tggattgaccacaacgagctgtttgcagtgaacaacgaatgtaaaggttctcccgatggc
gacctgacatttgaaagtgcaatcgacatcaagaaaagctcccaggacatcactgtctct
tacaactacatccacgatgtgaagaaagtgggcctcgatggttccagcagcagtgacatc
gctggcggccgcaagatcactttccaccacaacgtttatcgcaatgtgaatgcgcgcctg
cccttgcaacgcggtggttggattcacgtgtacaacaacctgtacgacggtattaccgat
tccggtattaacgtgcgccaggcgggttatgcactgattgaaagcaactggttccaaaat
gccaagaacccgatcacctgccgctatgacagcagcaattgtggtttctgggacctgcgt
aacaacaacgtgcgcaatcccggtgattttgctacctacaacatcacctggagcagcggc
ggtaccattgatgccaccaactggaccacaacacagcctttcccaatctccctgccttac
agctactcaccggtaagcgcacaatgtgttaaggataagctggagcaattcgccggtgtt
ggtaaaaacaatgcccagttgacgtcttccgcctgtggtggatcgacctcctctacaccg
gtctcttcgtcatcttccagccgttcatccagctcggtggctgtttcctcttccagcagc
tcatcaagcagttctgccgctgtcagcagctccgcaggttctgccccagtattgagtggt
accggtgattatccaagcggattctccaagtgtgctgacttgaatggtacctgctctgtt
gagtctggtgatggctgggttgcgttcggccgtaaaggcaagtgggtaaccaagcgcgtt
tctgtaccaggcacaattgcctgtaccgttgcagcctttggctctgacccaggtggcaat
cctaacaagtgctcttacaagcgctaa
DBGET
integrated database retrieval system
