Caldichromatium japonicum: GWK36_05585
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Entry
GWK36_05585 CDS
T07151
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
cjap
Caldichromatium japonicum
Pathway
cjap00300
Lysine biosynthesis
cjap00550
Peptidoglycan biosynthesis
cjap01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cjap00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GWK36_05585
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GWK36_05585
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cjap01011
]
GWK36_05585
Enzymes [BR:
cjap01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
GWK36_05585
Peptidoglycan biosynthesis and degradation proteins [BR:
cjap01011
]
Precursor biosynthesis
Amino acid ligase
GWK36_05585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
YqeC
Motif
Other DBs
NCBI-ProteinID:
QIK37538
UniProt:
A0A6G7VCF8
LinkDB
All DBs
Position
complement(1133887..1135356)
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AA seq
489 aa
AA seq
DB search
MQPNDLARLLAETPFSWQRPVPEGLVLTDIQWRADACNQGSILFFQCFEDGLSDDEIYRR
YLSGRRFAALVTNRPLACFARLEESRIYVTRPDDWAEVVRRFCDLVYPLDPRVRFIGVTG
TNGKTTTVNYLSAILRARGLRILTIGTLGVWRDGKRVAETGFTSPPLIELRRILYAEQER
IDLVVMEASSHALDQGRIAGIRFQDAGWTNFGLDHLDYHGDEERYFAAKSRILDHIAPGG
RLYCARPEVVQRLDALGRNPEITRVLLKPLNLPPEALAAKPFLALPHNRTNYALALALAG
RELGFDPLAGEILAQRDDWRSLEPVPGRFECYGRDDRRFLIDFAHTPDALESILTAIRTA
FPQHRLAVLFGCGGDRDRSKRPLMGAIAAGYADLIVLTSDNPRFEDPEQIIAEIQAGIAE
HPDCQRIVDRAAAIAALFDRLAARPFSEPWVALIAGKGHEPYIDQNGVKRPYSDREEVER
HLNRLGWAA
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccaaacgacctcgcccgtctgctcgccgagacgccattctcttggcagaggcca
gtcccagagggccttgtgctcaccgatattcaatggcgtgccgatgcctgcaatcaaggc
tcgatcctgttctttcagtgcttcgaggacgggctgtccgacgatgagatctatcggcgt
tacctttcaggtcgccgcttcgctgccctggtcaccaaccgtcccctggcctgttttgct
aggctagaggaaagcaggatctatgtgacccgacccgacgactgggccgaggtggtccgc
cgcttttgcgacctggtctatcccttggaccccagagtacgtttcatcggggtcacgggc
acgaacggcaagaccaccacggtcaattatctctcggcgatcctgcgggctaggggtctg
cggatattgacgatcgggacccttggggtctggcgcgacggcaagcgtgtcgccgagacc
ggcttcacctcaccgccgctgatcgagcttcggcgcatcctctatgccgagcaagagcgg
atcgatctggtggtcatggaggcgagcagccatgccctggatcaagggcgcatcgccggt
atccgctttcaagatgccggctggaccaatttcggcctggatcacctggactatcacggc
gacgaggagcgctatttcgccgccaagtcgcggatcctcgaccacatcgccccgggggga
cgactctattgcgcaaggccagaggtcgtccagcgcctggatgccctcggtcgaaatcca
gagatcaccagggtcttgcttaagccgctcaacctgccgcccgaggccctggccgccaag
ccctttttggccttgccgcacaaccgcaccaactatgccctggccctggccctggccgga
cgtgagctcggtttcgatccgcttgcaggcgagatactcgcgcagcgcgacgactggcgg
tctctcgagcccgtacccggccgattcgagtgctatggccgcgatgaccgtcgattcctg
atcgacttcgcccataccccggatgcgcttgaatcgattctaaccgcgatccgcaccgcc
ttcccccagcatcgcctggctgtgctctttggctgcggcggcgatcgcgaccgcagcaag
cgcccgctcatgggcgccatcgccgcgggttacgccgatctcatcgtcctgacctcggat
aatcctcgttttgaggaccccgagcagatcatcgccgagattcaggcagggatcgccgag
catcccgactgccagaggatcgtcgatcgcgccgcagcgatcgccgcgctcttcgaccgc
ctggccgcccgccccttctccgaaccctgggtggcgttgatcgccggcaaggggcatgag
ccctatatcgaccagaacggggtcaaacggccttatagcgatcgggaagaggtcgagcgc
catctcaaccggctcggctgggcggcctag
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