Callithrix jacchus (white-tufted-ear marmoset): 100389116
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Entry
100389116 CDS
T03264
Symbol
TRAF1
Name
(RefSeq) TNF receptor-associated factor 1
KO
K03172
TNF receptor-associated factor 1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04064
NF-kappa B signaling pathway
cjc04210
Apoptosis
cjc04668
TNF signaling pathway
cjc05200
Pathways in cancer
cjc05202
Transcriptional misregulation in cancer
cjc05203
Viral carcinogenesis
cjc05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
100389116 (TRAF1)
04668 TNF signaling pathway
100389116 (TRAF1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
100389116 (TRAF1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100389116 (TRAF1)
05202 Transcriptional misregulation in cancer
100389116 (TRAF1)
05203 Viral carcinogenesis
100389116 (TRAF1)
09162 Cancer: specific types
05222 Small cell lung cancer
100389116 (TRAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
XLF_CC
PilJ
Motif
Other DBs
NCBI-GeneID:
100389116
NCBI-ProteinID:
XP_035111932
Ensembl:
ENSCJAG00000020298
UniProt:
F7FL08
LinkDB
All DBs
Position
1:complement(166336100..166361562)
Genome browser
AA seq
467 aa
AA seq
DB search
MTLNHTSQRKEDKVIRDSYSPESEAQARTPQSWSSALEELRRALWPAWNPEMASSSGSSP
RPAPDENEFPFGCPPTGCKDPKEPRALCCAACLSENLRNGEDRICPKCRGEDLQSISPGS
RLRTQEKAHPEVTEVGVGCPFADVGCSFKGSPQSMQEHEVTYQTSHLNLLLGFMKKWKAR
LGSGLESGPMALEQNLSDLQLQAAVEVAGDLEVDCYRAPCSESQEELALQHFMKEKLLAE
LEGKLRVFENIVAVLNKEVEASHLALATSIHQSQLDRERIVNLEQRVMELQRTLAQKDQA
LGKLEQSLRLMEEASFDGTFLWKITNVTRRCQESACGKTVSLFSPAFYTAKYGYKLCLRL
YLNGDGTGKRTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSA
SFQRPQSETNVASGCPLFFPLSKLQSPKHAYVRDDTMFLKCIVETST
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgacgttgaaccacacaagccagagaaaagaagataaagtcatcagagactcctactca
ccggagagtgaagcccaggccagaactccacagagctggtcctctgccctggaggaactt
agacgggccctctggccagcttggaatcctgagatggcctccagctcgggcagcagcccc
cgcccggcccctgatgagaatgagtttccctttgggtgccctcccaccggctgcaaggac
ccaaaggaacccagggctctctgctgcgcagcctgtctctctgagaacctgaggaacggc
gaggatcggatctgccccaaatgcagaggggaagacctccagtctataagcccgggaagc
cgtcttcgaactcaggagaaggctcacccagaggtgactgaggttggagttgggtgcccc
tttgcagatgtcggctgctccttcaagggaagcccacagtccatgcaagagcatgaggtc
acctaccagacctcccacctaaacctgctgttggggttcatgaaaaagtggaaggcccgg
ctgggctctggcctggagtctgggcccatggccctagagcagaacctgtcagacctgcag
ctgcaggcggctgtggaagtggcgggagacctggaggtagactgctaccgggcaccctgc
tctgagagccaggaggagttggccctgcagcacttcatgaaggaaaagcttctggctgag
ctggaggggaagctgcgtgtgtttgagaatattgttgctgtcctcaacaaggaggtggag
gcttcccacctggccctggccacctccatccaccagagccagctggaccgcgagcgcatt
gtgaacttggagcagagggtgatggagctgcagcggaccctggcccagaaagaccaggcc
ctgggcaagctggagcagagcttgcgcctcatggaggaagcctcctttgatggcaccttc
ctgtggaagatcaccaatgtcaccaggcggtgccaagagtcagcctgtggcaagactgtc
agccttttctccccagcattctacactgccaagtatggctacaagttgtgcctacggcta
tacctgaatggagatggcactggaaagaggacccacctgtcactcttcatcgtgatcatg
agaggggagtacgatgcgctgctgccgtggcctttccggaacaaggtcaccttcatgctg
ctggaccagaacaatcgtgagcacgccattgatgccttccggcccgacctgagctcagcg
tcgttccagaggccccaaagtgaaaccaatgtggccagtggctgtccactcttcttcccc
ctcagcaagctgcagtcacccaagcacgcctacgtgagggacgacaccatgttcctcaag
tgcattgtggagaccagcacttag
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