Callithrix jacchus (white-tufted-ear marmoset): 100391093
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Entry
100391093 CDS
T03264
Symbol
HELZ
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
100391093 (HELZ)
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
100391093 (HELZ)
3'-5' decay
Other 3'-5' decay factors
100391093 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
zf-CCCH
UvrD-helicase
AAA_30
ResIII
PhoH
PAM2
zf_CCCH_4
Mov-10_helical
zf-CCCH_4
AAA_22
Bac_DnaA
AAA_7
AAA_16
Mg_chelatase
AAA_5
Motif
Other DBs
NCBI-GeneID:
100391093
NCBI-ProteinID:
XP_035157469
Ensembl:
ENSCJAG00000032527
UniProt:
F6UUR8
LinkDB
All DBs
Position
5:118151125..118333516
Genome browser
AA seq
1943 aa
AA seq
DB search
MEDRRAEKSCEQACESLKRQDYEMALKHCTEALLSLGQYSMADFTGPCPLEIERIKIESL
LYRIASFLQLKNYVQADEDCRHVLGEGLAKGDDAFRAVLCCMQLKGNLQLVSTILAKSLT
GEFLNGMVTKDLTRLKTLLSETETATSNALSGYHVEDLDEGSCNGWHFRPPPRGITSSEE
YTLCKRFLEQGICRYGAQCTSAHSQEELAEWQKRYASRLIKLKQQNENKQLSGSYMETLI
EKWMNSLSPEKVLSECIEGVKVEHNPDLSVTVSTKKSHQTWTFALTCKPARMLYRVALLY
DAHRPHFSIIAISAGDSTTQVSQEVPENCQEWIGGKMAQNGLDHYVYKVGIAFNTEIFGT
FRQTIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKQQLVTTAKRWDSSSKTIIDFEPNE
TTDLEKSLLIRYQIPLSADQLFTQSVLDKSLTKTNYQSRLHDLLYIEEIAQYKEISKFNL
KVQLQILASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVP
KQKLVQTQGTKEKVYEATIEEKTKEYIFLRLSRECCEELNLRPDCDTQVELQFQLNRLPL
CEMHYALDRIKDNGVLFPDVSMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQ
LPPVLIIGPYGTGKTFTLAQAVKHILQQQETSRILICTHSNSAADLYIKDYLHPYVEAGN
PQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKHRVVVVTLNTSQYLC
QLDLEPGFFTHILLDEAAQAMECETIMPLALATQNTRIVLAGDHMQLSPFVYSEFARERN
LHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYP
LTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQ
VFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDS
TEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENNSLHG
ITFEQIKAQLEALELKKTYVLNPLAPEFIPRALRLQHSGSTNRQQQSPPKGRGLHHTQND
HFQNDGIVQPNPSVLIGNPIRAYTPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVY
GGNVVMSVPLPVPWTGYQGRFAVDPRIITHQAAMAYNMNLLQTHGRGSPIPYGLGHHPPV
SIGQPQNQHQEKDQHEQNRNGKSDINNSGPEINKIRTPEKKPTEPKQVDLESNPQNRSPE
SRPSVVYPSTKFPRKDNLNPRHINLPLPAPHAQYAIPNRHFHPLPQLPRPPFPIPQQHTL
LNQQQNNLPEQPNQIPPQPNQVVQQQSQLNQQPQQPPPQLSPAYQAGPSNAFFNNAVAHR
PQSPPAEAVIPEQQPPPMLQEGHSPLKAIAQPGPILPSHLNSFIDENPPGLPLGEALDRI
HGSVALETLRQQQARLQQWSEHHAFLSQGSVPFSHHHHPHLQHLPQPPLGLHQPPVRADW
KVTSSAEDEVETTYSRFQDLIRELSHRDQSETRELAEMPPPQSRLLQYRQVQTRSPPAVP
SPPSSTDHSSHFSNFNDNSRDIEVASNPAFPQRLPPQIFSSPFSLPSEHLAPPPLKYLAP
DGAWTFANLQQNHLMGPGFPYGLPPLPHRPPQNPFVQIQNHQHAIGQEPFHPLSSRTVSS
SSLPSLEEYEPRGPGRPLYQRRISSSSVQPCSEEVSTPQDSLAQCKELQDHSNQSSFNFS
SPESWVNSTSSTPYQNIPCNGSSRTAQPRELIAPPKTVKPSEDQLKSENLEVSSSFNYSV
LQHLGQFPPLMPNKQIAESANSSSPQSSAGGKPAMSYASALRAPPKPRPPPEQAKKSSDP
LSLFQELSLGSSSGSNGFYSYFK
NT seq
5832 nt
NT seq
+upstream
nt +downstream
nt
atggaagacagaagagctgaaaagtcatgtgaacaagcatgtgaatcacttaagaggcag
gactatgaaatggccctcaagcactgcacagaggcccttctttctcttggccagtactcc
atggcagacttcacagggccttgtccattggaaatagaacgcatcaaaatcgagagtctt
ctttacagaattgcctcatttttgcaactgaaaaactatgtgcaagctgatgaagattgt
agacatgtgctgggagaaggactggctaagggagatgatgccttccgggcagtgctttgc
tgcatgcagctgaaagggaatcttcaacttgtatccaccattcttgccaagtcactgaca
ggagagttcctgaatgggatggtaacaaaggatttgacaagactaaaaacacttctgtca
gaaacagagacagcaactagtaacgccctctctggatatcacgtggaagacttagatgag
gggtcttgtaatggttggcatttccgcccaccacctaggggaatcacgagcagcgaggaa
tatactttgtgtaaaagatttttagagcaaggaatctgtaggtatggtgcccagtgtact
tcagcacattcccaggaagaactagcagaatggcagaaaagatatgcttcacggctgata
aaattgaaacagcaaaatgagaataaacagctctcaggcagttacatggaaaccttgata
gaaaagtggatgaattcattgtctcctgagaaagtgcttagtgaatgtatagaaggagta
aaggtagagcacaatcctgacctgtcagtaactgtcagcaccaaaaaatcccaccagacg
tggacctttgctctcacctgtaagcctgcaagaatgctgtatcgtgtagcattgctttat
gatgctcatcgtcctcattttagtatcattgcaatatctgccggagatagcactacccag
gtatcacaagaagtcccagaaaactgtcaagaatggataggaggaaagatggcccaaaat
ggattagatcattatgtgtataaagtcgggatagcatttaacacagaaatatttggaact
tttcgccaaaccatagttttcgactttggattggaaccagtactgatgcaaagagtaatg
attgatgcagcttctacagaagatctcgaatatctgatgcatgcgaaacagcaactagtt
accacagctaagcgttgggattcttcctctaagactattatagattttgaacctaatgaa
actactgatttggagaagagccttcttatcagataccaaattcccctctctgctgaccag
ctatttacccagtccgttttagacaagtcattgaccaagaccaactatcagtcacggtta
catgaccttctttatattgaggagatagcccagtataaagaaatcagcaagttcaacctt
aaagtgcaattgcagattctagcaagcttcatgctcactggcgtttctggaggtgcaaag
tatgctcagaatggacaactttttggtcgctttaagcttaccgaaacactttctgaagat
actttggctggacgactggtgatgaccaaagtcaatgctgtttatttattaccagtccct
aaacagaagttagttcagacccagggaaccaaagaaaaggtttatgaagctactattgaa
gaaaaaacaaaggagtatatatttttaaggctatctagggaatgctgtgaagaacttaat
cttcggcctgactgtgacacacaggttgaacttcagtttcaattaaatcgattacccctc
tgtgaaatgcactatgcactagacaggatcaaggacaatggggttttgtttccagatgtc
agtatgactcccaccataccatggagtcctaacagacaatgggatgaacagttggatcct
cgactaaatgcaaaacagaaagaggctgttctggccattaccactccactttcaatccag
ctgccgcctgtgcttatcatcggaccctatgggacaggcaaaacgttcactctagctcag
gctgtcaaacatattctgcagcagcaggagactagcaggattctcatttgcacccattct
aatagtgctgctgatctctacataaaggattatttacatccatatgtagaagcaggcaat
ccccaggcaagacctctcagggtatatttcagaaatcgctgggtaaagactgtccaccca
gttgtgcatcagtactgtttgatctcaagcgcacattccacctttcagatgccccagaaa
gaagatattcttaaacatcgagtagtggttgttacattgaatacttcccagtatctctgt
cagttggaccttgaacctgggttttttacacacattctattagatgaagctgcccaggcc
atggagtgtgaaaccattatgcccctagcattagcaactcaaaacactcggattgtcttg
gctggtgatcacatgcagctcagtccttttgtttacagcgagtttgccagggagagaaac
cttcacgtttcattacttgaccgactctatgagcattaccctgctgagttcccatgtagg
attctcctgtgtgagaactaccgctcccatgaagctatcatcaattatacctctgagctt
ttctatgagggcaaactgatggccagtgggaagcagccagcacacaaagatttctaccca
ctaactttctttacagcacgaggagaagatgtgcaagaaaaaaatagcacagctttttat
aataatgcagaggtgtttgaagtggtggaacgcgtagaagagttaagaaggaagtggcca
gtagcgtgggggaagttagatgatggcagtattggtgtggtgactccatatgctgatcaa
gtgtttagaatacgggctgaacttcgtaaaaagagattgtctgatgttaatgtagaaagg
gtgctaaatgttcaaggaaagcagttcagagttttgtttcttagcacagtacgtacaaga
catacttgtaaacataaacagacaccaattaaaaagaaagagcaacttctggaagattcc
acagaggacttagattatggttttttatctaactacaagcttctcaatactgccatcaca
agagcacaatccctggttgctgtggtgggtgatcccattgctctgtgctctattggaaga
tgcaggaaattttgggaacggtttattgccctgtgtcatgaaaacaatagcctacatgga
atcactttcgaacagatcaaggctcagttagaggctttagaactaaagaagacatacgtg
ttgaatccactggcacctgaatttatcccccgggctctaagactgcagcattcaggaagt
accaacagacagcagcaatcaccacccaaggggagaggtcttcatcatacccagaatgat
cacttccagaatgatggaattgttcaacccaatccttctgtacttattggcaatcctatt
agagcatatactcctccaccccctcttggacctcatccaaatttgggaaaatctccaagc
cctgttcaaagaatagatcctcacactgggacaagtattctctatgtacctgctgtctat
ggagggaatgtagttatgtcggtgcctttacctgtaccatggacaggataccagggtagg
tttgcagttgatcctcgaattattacccatcaggcagcaatggcctataacatgaacctg
ttacagacacatggacgaggatctcctattccttacggccttggacatcacccacctgtc
agcataggccagccacaaaatcagcatcaggagaaggatcagcatgagcaaaatcgaaat
ggtaaaagtgatataaataattccggacctgaaattaataagattcgaacaccagagaaa
aagccaacagaaccaaaacaggttgatttggaatcaaatccacagaacagaagtcctgaa
tcacgtcctagtgttgtttatcccagtaccaaatttcctcgcaaagataatctcaaccca
agacacataaatcttcctcttcctgccccccatgcacagtatgcaatccctaatcgccat
tttcatccccttccgcagctaccaagaccaccctttccaattccacagcagcacaccttg
ttaaatcagcagcagaataatttgcctgaacaaccaaatcaaataccacctcagccaaat
caggtagtccagcagcaaagtcagttgaatcagcagcctcagcagccgcctcctcagctt
tctcctgcatatcaggcaggacccagcaatgctttttttaataatgcagttgctcatcgg
ccacagtctcctcctgcagaggctgtgattccagagcagcagccccctcccatgctgcaa
gaaggccacagtcctctgaaagccattgcacagcctggccccattcttccttcgcatctg
aatagcttcattgatgagaatcccccaggattacctttgggggaggctttagatcgtata
catgggagtgtggctctggaaacattaaggcagcagcaggcacggttacagcagtggagt
gagcaccatgccttcctcagtcagggcagtgttccattctcgcaccaccaccatccccac
ctccagcatcttcctcagccccccctgggattacatcagccgccagtgagggcagactgg
aaggtcaccagcagtgccgaagatgaagtggaaaccacatactcaaggtttcaagactta
atcagagaactgtctcatcgtgatcaaagtgaaacacgggaactagctgaaatgccacca
cctcaatcaagacttttgcaatatagacaagtacagactagaagcccaccagcagtcccg
tctcccccatccagtacagaccacagtagccacttttctaactttaatgataacagcaga
gacattgaagtagccagcaacccagcatttccacagcgcctccctccccagatattcagc
tcgcctttctcgttgccatctgaacaccttgccccccctcccttgaaatacctggcacct
gatggagcgtggacttttgctaacttgcaacagaatcacctaatggggccaggttttccc
tatggcctacctccattgcctcacaggccaccgcagaacccttttgtacaaatacagaat
catcaacatgctattggtcaagagccatttcacccattgtcatctcgaacagtatcttct
tcttcgctccctagcttagaagagtatgagcccagaggacctggtcggcccttgtaccaa
agaagaatctcatctagctcagttcaaccttgttctgaagaagtaagcactcctcaagac
agtctggctcagtgtaaagagcttcaggaccacagtaaccaatcttctttcaacttttca
tccccggagtcctgggtaaacagcacctcatctactccctatcagaacattccgtgcaat
ggatccagcaggacagctcagcccagagagttgatagctccacccaagactgtcaaaccc
tctgaggatcaactgaagtcggagaacctcgaggtgtccagttctttcaactacagtgtg
ctgcagcatctcggccagttcccacccctcatgcccaacaagcagatcgcggagtcggcc
aatagcagtagcccccagagctctgcagggggcaagcctgccatgtcctatgccagtgct
ctgcgggcccctccaaagcccaggccccctcctgagcaggccaagaagagtagcgaccct
ctgtctctcttccaggaactgagcctggggagctcatccggcagcaatggcttttactca
tattttaaataa
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integrated database retrieval system
