Callithrix jacchus (white-tufted-ear marmoset): 100394714
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Entry
100394714 CDS
T03264
Symbol
ZNF780B
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger protein 780B
KO
K09228
KRAB domain-containing zinc finger protein
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100394714 (ZNF780B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjc03000
]
100394714 (ZNF780B)
Transcription factors [BR:
cjc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100394714 (ZNF780B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_6
KRAB
Zn-ribbon_8
zf-C2H2_jaz
zf-C2H2_3rep
Zn_Tnp_IS1595
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
100394714
NCBI-ProteinID:
XP_054105867
LinkDB
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Position
22:complement(34213081..34243368)
Genome browser
AA seq
862 aa
AA seq
DB search
MLARVVSNSGTQGRSTRKIDQFCNSKNMVHGSVTFRDVAIDFSQEEWECLQPAQKTLYRD
VMLENYSHLISLGSSVSKPDVITLLEQEKEPWMVVRKETSRWYPDLESKCGPEKISLEND
ISEINLPKQFIKQISKTLGLEAFYFRNVSEYRSRFEGLQGLQEGYININQKVINYEEMPT
YPHASLIHNTHKPYECKECGKYFSCGSHLIQHQSIHTGEKPYKCKECGKAFQLHIQLTRH
QKSHTGEKPFECKECGKAFNLLTLLNRHKNIHTGEKLFECKECGKSFNRSSNLTQHESIH
AGVKPYQCKECGKAFNRGSNLIQHQKIHSNEKPFVCRECAMAFRYQYQLIEHCQIHTGEK
PFECKECRKVFTLLTKLVRHQKIHTGEKPFECRECGKAFTLLNQLNRHKNIHTGEKPFKC
NECGKSFNRSSNLIQHQNIHAGVKPYECKECGKGFTRGANLIQHQKIHSNEKPFVCRECE
MAFRYHYQLIQHCQIHTGGKPFECKECGKAFSLLTQLARHKNIHTGEKPFECKDCGKAFN
CGSNLVQHQSIHTGEKPYKCKECGKAFRLHLQLSHHQKTHTGEKPFECNKECGKYFRRGS
NLNQHRSIHIGKKPFECKKCGKAFRLHMHLIRHQKFHTGEKPFECKDCGKAFSLPIQLNR
HKKIHSGGKPFEYKECGKSFXVLNLVQHQSIHAGVKPYECKECGKDFNHGSNLIQHQKIH
SSEKPFVCKECRKTFRYHYQLIEHCQIHTGEKPFECKECGKAFSLPTQLAQHQIIHTGEK
PFKCKECGKAFNFGSNLVQYQSIHTDEKPYECKECGKAFRLHLQLSWHQKLIQVRNSLNV
RNMGQPSDISTNLLNIRKFILG
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgttggccagggtggtctcgaactccggaactcaggggagaagcacaaggaagattgac
caattttgtaattctaaaaacatggtccatggatcagtgacattcagggatgtggccatc
gacttctctcaggaggagtgggagtgcctgcagcctgctcagaagaccttgtacagggat
gtgatgctggagaactacagccacctgatctcactgggaagttccgtttctaagccagat
gtgattacgttactagagcaagagaaagagccctggatggttgtaaggaaagaaacaagc
agatggtatccagatttggagtcaaaatgtggacctgagaaaatatctctggaaaatgat
atttctgaaataaatttaccaaaacagtttataaagcaaataagtaaaacacttggcctt
gaggccttttattttagaaatgtctcagaatatagaagtagatttgagggactacaggga
cttcaagaaggatatatcaatatcaatcagaaggtgatcaactatgaagaaatgcctact
tatcctcatgcttctcttattcacaatacacataaaccatatgaatgtaaggaatgtggg
aaatactttagttgtggttcacatcttattcagcatcagagtattcatactggagagaaa
ccctataaatgtaaagaatgtgggaaagcctttcaacttcacatacaacttactcgacat
cagaaatctcatactggtgagaaaccttttgaatgtaaggaatgtggaaaagcctttaat
cttctcactctgcttaaccgccataagaacattcacacaggtgagaaactgtttgaatgt
aaggaatgtgggaagtcctttaatcgtagctcaaaccttactcagcatgaaagtattcat
gctggtgtaaaaccttatcagtgtaaggagtgtgggaaagcctttaatcgtggttcaaat
cttattcagcatcagaaaattcattccaatgagaaaccctttgtatgtagggaatgtgcg
atggcctttcgatatcagtaccaacttattgaacattgccaaattcatacaggtgagaaa
ccctttgaatgtaaagaatgcaggaaggtctttactcttctgacaaagcttgtccgacat
cagaagattcatacaggtgagaagccctttgaatgtagagaatgtggaaaggcctttact
cttctcaaccagctcaatcgccataagaacattcacacaggtgaaaaaccatttaaatgt
aatgaatgtgggaagtccttcaaccgtagctcaaatcttatccaacatcagaatattcat
gctggtgtaaaaccatatgaatgtaaggagtgtgggaaaggctttactcgtggtgcaaat
cttattcagcatcaaaaaattcattccaatgagaaaccctttgtatgtagggaatgtgag
atggcctttagatatcattaccaacttattcaacattgccaaattcatactggtgggaag
ccctttgaatgtaaagaatgtggaaaggcctttagtcttctgacacagcttgctcgacat
aagaacattcatactggtgagaaaccatttgaatgtaaagactgtgggaaggcctttaat
tgtggctcaaaccttgttcaacatcagagtattcacacaggtgagaagccctataaatgt
aaggagtgtgggaaggcttttagacttcacctacaactttctcaccatcagaaaacgcat
acaggcgagaaaccctttgaatgtaataaggaatgtgggaaatattttcgtcgtggttca
aatcttaatcaacatcgaagtattcatattggaaagaaaccctttgagtgtaagaaatgt
gggaaagcctttcgacttcatatgcaccttattcgacaccagaaatttcatactggtgag
aaaccctttgaatgtaaggactgtggcaaggccttcagtcttcccatccagcttaatcgc
cataagaaaattcactcaggtgggaagccatttgaatataaggaatgcgggaagtccttt
ngtgtcttgaaccttgttcaacatcagagtattcatgctggtgtaaaaccatatgaatgt
aaggagtgtgggaaagactttaatcatggttcaaaccttattcagcatcagaaaattcat
tccagtgagaaaccctttgtatgtaaggagtgtcggaagacctttagatatcattaccaa
cttattgaacattgccaaattcatactggtgagaaaccctttgaatgtaaagaatgtgga
aaggcctttagtcttccgacacagcttgctcaacatcagatcattcatactggtgagaag
ccatttaaatgtaaggagtgtgggaaggccttcaattttggctcaaaccttgttcaatat
cagagtattcatactgatgagaaaccctatgaatgtaaggagtgtgggaaggcttttaga
cttcacctacaactttcttggcatcaaaaactcatacaagtgagaaactctttgaatgta
agaaatatgggacaaccttcagatatcagtaccaacttactgaacattagaaaattcata
ctagggtga
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