Callithrix jacchus (white-tufted-ear marmoset): 100411005
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Entry
100411005 CDS
T03264
Symbol
SLC6A11
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3 isoform X1
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04721
Synaptic vesicle cycle
cjc04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
100411005 (SLC6A11)
04721 Synaptic vesicle cycle
100411005 (SLC6A11)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cjc02000
]
100411005 (SLC6A11)
Transporters [BR:
cjc02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
100411005 (SLC6A11)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
100411005
NCBI-ProteinID:
XP_035132190
Ensembl:
ENSCJAG00000016541
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All DBs
Position
15:61935596..62054184
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AA seq
632 aa
AA seq
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MTAEKALPLGNGKAAEETRESEAPGGGGGSGGAAAARDPRDKRDKAVHERGHWNNKVEFV
LSVAGEIIGLGNVWRFPYLCYKNGGGAFLIPYVVFFICCGIPVFFLETALGQFTSEGGIT
CWRKVCPLFEGIGYATQVIEAHLNVYYIIILAWAIFYLSNCFTTELPWATCGHEWNTENC
VEFQKLNVSNYSHVSLQNATSPVMEFWERRVLAISDGIEHIGNLRWELALCLLAAWTICY
FCIWKGTKSTGKVVYVTATFPYIMLLILLIRGVTLPGASEGIKFYLYPDLSRLSDPQVWV
DAGTQIFFSYAICLGCLTALGSYNNYNNNCYRDCIMLCCLNSGTSFVAGFAIFSVLGFMA
YEQGVPIAEVAESGPGLAFIAYPKAVTMMPLSPLWATLFFMMLIFLGLDSQFVCVESLVT
AVVDMYPKVFRRGYRRELLILALSVISYFLGLVMLTEGGMYIFQLFDSYAASGMCLLFVA
IFECICIGWVYGSNRFYDNIEDMIGYQPLSLIKWCWKIVTPGICAGIFIFFLVKYKPLKY
NNVYTYPAWGYGIGWLMALSSMLCIPLWICIKMWKTEGTLPEKLQTLTTPSTDLKMRGKL
GVSPRMVTVNDCDAKLKSDGTIAAITEKETHF
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgacggcggagaaggcgctgcccctgggcaatgggaaggctgccgaggagacgcgggag
tccgaggcgccgggtggcggcggcggcagcgggggtgcggcggccgcgcgcgacccgcgc
gacaagcgcgacaaggcggtccacgagcgcggccactggaacaacaaggtggagttcgtg
ctgagcgtggccggggagatcattggactgggcaacgtgtggcgcttcccctacctgtgc
tacaagaacggaggaggggcgttcctgattccctatgtggtgttttttatttgctgtgga
attcctgtttttttcctggagacagctctgggacagttcacgagtgaaggtggcattacg
tgttggaggaaagtttgccctttatttgaaggcattggctatgcaacgcaagtgattgag
gcccatctgaatgtgtactacatcatcatcctggcatgggccattttttacctgagcaac
tgcttcactactgagctaccctgggctacctgtgggcatgagtggaacacagagaattgt
gtggagttccagaaactgaatgtgagcaactacagccatgtgtctctgcagaatgccacc
tcccccgtcatggagttttgggagcgccgggtcctggccatctctgatgggatcgagcac
atcgggaatctccgctgggagctggccttgtgtctcctggcagcctggaccatctgttac
ttctgtatctggaaggggaccaagtctacaggaaaggttgtgtacgtgactgcaacattc
ccctacatcatgctgctgatcctcctgatacgaggggtcacattgcccggggcctcagag
ggcatcaagttctacttgtaccctgatctttcccggctctctgacccacaggtctgggta
gatgctggaacgcagatctttttctcctatgccatttgcctgggctgtctgaccgctctg
ggaagttataacaattataacaacaactgctacagggactgcatcatgctctgttgcctg
aacagcggcaccagcttcgtggctgggtttgccatcttctcggtcctgggttttatggcg
tatgagcagggggtacccattgctgaggtggcagagtcaggccccggcctggcctttatt
gcgtaccccaaggcggtcaccatgatgcctctctccccactgtgggccaccttgttcttc
atgatgctcatcttcctgggactggacagccagtttgtgtgcgtggaaagcctggtgact
gccgtagtggacatgtaccccaaggtcttccgaaggggttaccggcgggagctgctcatc
ctagccttgtctgttatctcctattttctgggccttgtgatgttaacagagggtggcatg
tacatcttccagctctttgactcctacgctgccagtgggatgtgccttctcttcgtggcc
atctttgagtgcatctgcatcggctgggtgtatggaagcaaccggttctatgataacatt
gaagacatgattggctaccagccactgtcgctcattaagtggtgctggaagatcgtgacg
cctggaatctgtgcggggatcttcatcttcttcttggtcaagtacaagccgctcaagtac
aacaacgtctacacctacccggcctggggctacggcatcggctggctcatggccctgtcc
tccatgctctgcatcccgctctggatctgcatcaagatgtggaagacagaggggacactg
cctgagaaactccagacgttgacgacccccagcacagatctgaaaatgcggggcaagctt
ggggtgagcccacggatggtgacagttaatgactgtgacgccaaactcaagagtgacggg
accatcgcagccatcacagagaaggagacgcacttctga
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