Callithrix jacchus (white-tufted-ear marmoset): 100411005
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Entry
100411005 CDS
T03264
Symbol
SLC6A11
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3 isoform X1
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04082
Neuroactive ligand signaling
cjc04721
Synaptic vesicle cycle
cjc04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
100411005 (SLC6A11)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
100411005 (SLC6A11)
04721 Synaptic vesicle cycle
100411005 (SLC6A11)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cjc02000
]
100411005 (SLC6A11)
Transporters [BR:
cjc02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
100411005 (SLC6A11)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
100411005
NCBI-ProteinID:
XP_035132190
Ensembl:
ENSCJAG00000016541
UniProt:
U3EZ69
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Position
15:61935596..62054184
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AA seq
632 aa
AA seq
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MTAEKALPLGNGKAAEETRESEAPGGGGGSGGAAAARDPRDKRDKAVHERGHWNNKVEFV
LSVAGEIIGLGNVWRFPYLCYKNGGGAFLIPYVVFFICCGIPVFFLETALGQFTSEGGIT
CWRKVCPLFEGIGYATQVIEAHLNVYYIIILAWAIFYLSNCFTTELPWATCGHEWNTENC
VEFQKLNVSNYSHVSLQNATSPVMEFWERRVLAISDGIEHIGNLRWELALCLLAAWTICY
FCIWKGTKSTGKVVYVTATFPYIMLLILLIRGVTLPGASEGIKFYLYPDLSRLSDPQVWV
DAGTQIFFSYAICLGCLTALGSYNNYNNNCYRDCIMLCCLNSGTSFVAGFAIFSVLGFMA
YEQGVPIAEVAESGPGLAFIAYPKAVTMMPLSPLWATLFFMMLIFLGLDSQFVCVESLVT
AVVDMYPKVFRRGYRRELLILALSVISYFLGLVMLTEGGMYIFQLFDSYAASGMCLLFVA
IFECICIGWVYGSNRFYDNIEDMIGYQPLSLIKWCWKIVTPGICAGIFIFFLVKYKPLKY
NNVYTYPAWGYGIGWLMALSSMLCIPLWICIKMWKTEGTLPEKLQTLTTPSTDLKMRGKL
GVSPRMVTVNDCDAKLKSDGTIAAITEKETHF
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgacggcggagaaggcgctgcccctgggcaatgggaaggctgccgaggagacgcgggag
tccgaggcgccgggtggcggcggcggcagcgggggtgcggcggccgcgcgcgacccgcgc
gacaagcgcgacaaggcggtccacgagcgcggccactggaacaacaaggtggagttcgtg
ctgagcgtggccggggagatcattggactgggcaacgtgtggcgcttcccctacctgtgc
tacaagaacggaggaggggcgttcctgattccctatgtggtgttttttatttgctgtgga
attcctgtttttttcctggagacagctctgggacagttcacgagtgaaggtggcattacg
tgttggaggaaagtttgccctttatttgaaggcattggctatgcaacgcaagtgattgag
gcccatctgaatgtgtactacatcatcatcctggcatgggccattttttacctgagcaac
tgcttcactactgagctaccctgggctacctgtgggcatgagtggaacacagagaattgt
gtggagttccagaaactgaatgtgagcaactacagccatgtgtctctgcagaatgccacc
tcccccgtcatggagttttgggagcgccgggtcctggccatctctgatgggatcgagcac
atcgggaatctccgctgggagctggccttgtgtctcctggcagcctggaccatctgttac
ttctgtatctggaaggggaccaagtctacaggaaaggttgtgtacgtgactgcaacattc
ccctacatcatgctgctgatcctcctgatacgaggggtcacattgcccggggcctcagag
ggcatcaagttctacttgtaccctgatctttcccggctctctgacccacaggtctgggta
gatgctggaacgcagatctttttctcctatgccatttgcctgggctgtctgaccgctctg
ggaagttataacaattataacaacaactgctacagggactgcatcatgctctgttgcctg
aacagcggcaccagcttcgtggctgggtttgccatcttctcggtcctgggttttatggcg
tatgagcagggggtacccattgctgaggtggcagagtcaggccccggcctggcctttatt
gcgtaccccaaggcggtcaccatgatgcctctctccccactgtgggccaccttgttcttc
atgatgctcatcttcctgggactggacagccagtttgtgtgcgtggaaagcctggtgact
gccgtagtggacatgtaccccaaggtcttccgaaggggttaccggcgggagctgctcatc
ctagccttgtctgttatctcctattttctgggccttgtgatgttaacagagggtggcatg
tacatcttccagctctttgactcctacgctgccagtgggatgtgccttctcttcgtggcc
atctttgagtgcatctgcatcggctgggtgtatggaagcaaccggttctatgataacatt
gaagacatgattggctaccagccactgtcgctcattaagtggtgctggaagatcgtgacg
cctggaatctgtgcggggatcttcatcttcttcttggtcaagtacaagccgctcaagtac
aacaacgtctacacctacccggcctggggctacggcatcggctggctcatggccctgtcc
tccatgctctgcatcccgctctggatctgcatcaagatgtggaagacagaggggacactg
cctgagaaactccagacgttgacgacccccagcacagatctgaaaatgcggggcaagctt
ggggtgagcccacggatggtgacagttaatgactgtgacgccaaactcaagagtgacggg
accatcgcagccatcacagagaaggagacgcacttctga
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