KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100411861
Entry
100411861         CDS       T03264                                 
Symbol
MDC1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1 isoform X1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cjc03400]
    100411861 (MDC1)
DNA repair and recombination proteins [BR:cjc03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    100411861 (MDC1)
SSDB
Motif
Pfam: BRCT_2 FHA RTT107_BRCT_5 BRCT Yop-YscD_cpl
Other DBs
NCBI-GeneID: 100411861
NCBI-ProteinID: XP_035153323
Ensembl: ENSCJAG00000019900
LinkDB
Position
4:complement(32746805..32766833)
AA seq 2120 aa
MMEDTQAIDWDIEEEEETEQSCESLGCNLEPVGRLHIFSGAHGPEKDFPLHLGKNVIGRM
PGCSVALPFPSISKQHAEIEISAWDKAPILRDCGSLNGTQILRPPKVLSPGVSHRLRDQE
LILFADLPCQYHRLDVPLPFVSRGPLTVEETPRVQGGTQPQRLLLAEDSEEEVDSLSERC
VIKKSRTTSSSVGMIVPESDEEGNSPVLGGPGLPFAFTLNSDTVAEDQQPATEEASSAAR
RGAAIEPEQSEAEVTTEIQLEKNQPSVKERDNDTKVKRGAGNGVVLAGMMLERSQPPAED
SDTDVDDDSRPPGRPAEVHLERVQPLGFIDSDTDIEEEGIPATPAVVPMKKRKIFHGVGI
RGPGAPGLAHLQESQAGSDTDMEEGKAPQAVPLKKSQASMVINSDTDDEEEVSAALTLAR
LKESQPALWNRDAEEDMAQPVVLLQRSQTTTGRDSDTDEEEKLPVENKEAVPKGHTKIRA
LFRAHSEKNQHSFRDSDKSVEADKSSPGIHLERSQASTTVDINTQVKESAMVPMQGTNQT
DVEAGGGREKLLVVSLEEAWPPPHGLCETDAEEGTSLAASAVADVRKSQLPAEGDAGAEW
ATAVLKQERALKVGAQGQSPVAQMEQDLPISRENLTDLVVDTDALGESTQRQGEGAQVPT
GREREPHVGGTKDSKDNCDDSEDLDLQATQCFLERKNQSLEAVQSMEDEPTQTFMLTPPQ
EPGPSHCSFQTPGSLDEPWEVLATQPFCLRESKDSETQPFDTYLEACGSCLSPPRAIPGD
QHPESPVHTEPMGIQGREMQTMDKDMGIPKETTERMAPERVPLERETEKLMPERQTDVTG
EEELTRGMQDREQKQLLARDSQRQESGKKGESASPKRNRESSKVEIQTSEEIQEKEVEKQ
TLPNKTFERDVERPVADRECEPAELEGKVPKVILERGTQRGEPEGGSRDQKGQASSPTPE
PGVGVRDFPEPASAPIPSGSQSGERGSPVSPRRHQKGLNCKMPPAKKASRIRAAKKASRG
DQESPDACLHPTVPETSAPPLKPLNSQSQKRLAPQPLLSPFPPSIEPTIPKTRQNGNREA
PGTPLSSELEPFHPKPKIITQKSSRMTPFPATSAALEPQPSTSTTHPDTPKPTSQATRGK
TNRSSVKTPETFVPTAPELQPSTSTDQPVTPEPTFQATRGRKNRFSVKTPETVVPTAPEP
HPSTSRDQPVTPKPTSQATRGKTNRSSIKTPETFVPTAPELQPSTSTNQLVTHEFTSWAT
RGRTNRSSVKTPESTVPVAPELPPSTSTDQPVTPEPTSRTTRGRTNKSSVKTPESVVSTA
PELQPCTSTDQLVTPEPTSQTTRGRTNKSAVKSPESVVSTAPELQPCTSTDQLVTPEPTS
RATRGRKNRSSVKNPERVISTAPELQASTSTDQPVTPEPTSQATRRRKNRSSVKTPETVV
PIASELQASAFTDQPVTPEPTSQATRGRKNRPSVKTPETVVLIASELQASASTDQPVTPE
PTSQATRGRKNRSSVKTPETVVPIASELQASASTDQPVTPEPTSRTTRGRTNRSSVKTPE
SVVPTAPELQVSASTVQPVTPEPTSQTTRGRTNRSSVKTPESVVPIAPELQPSTSRNQLV
TPEPTSRATRGRTDGSSVRTPEPVVPTAPEPVPTTSIDQPVTPKPTSRATRGRVNRSSVK
TPKPVEPAASNLEPLIPTDLPVTPEAIAQGSQSKTLRSSIVSAVSVPTTLEFQSPVTTDQ
PISPEPIPQASCSKRQRVIGNPGSLKTPIDHKPCSAPLETKSQASRNQRWGAVREAESLT
AIPEPASFQLLETPTHASQIQKVEAVGRSRFTSEPQPKVSQSRKRPFATTDSPPLQKQPR
REVSQKTVFLKEELEDTTEKPGKEEDVMTPKPGKKKRDQAEEEPNSIQSRSLRRTKLTRE
STAPKVLFTGVVDAQGERAVLALGGSLADSAAEASHLVTDRIRRTVKFLCALGRGIPILS
LDWLHQSRKAGCFLPPDEYVVTDPEQEKNFGFSLQDALSRARERRLLEGYEIHVTPGVQP
PPPQMGEIISCCGGTVLPSMPRSYKPQRVVITCSQDFPRCSVPRRVGLPLLSPEFLLTGV
LKQEAKPEAFVLSPLEMSST
NT seq 6363 nt   +upstreamnt  +downstreamnt
atgatggaggacacccaagctattgattgggacattgaagaagaggaggagacagagcaa
tcctgtgaatccttggggtgtaacttggagccagtagggcggctacatatctttagtggt
gcccatggaccagaaaaagatttcccactacaccttgggaagaatgtgataggccgaatg
cctggctgctctgtggccctgccctttccatctatctccaaacaacatgcagagattgaa
atctcagcctgggacaaggcacctatcctccgagactgtgggagccttaatggtactcaa
atcctgaggcctcctaaggttttgagccctggggtgagtcaccgtctgagggaccaggaa
ttgattctctttgctgacttgccctgccagtaccatcgcctggatgtccccctgcccttt
gtctcccggggccctctgactgtagaagagacacccagggtacagggaggaactcaaccc
cagaggcttctgttggctgaggactcagaggaggaagtagattctctttctgaaaggtgt
gtgataaaaaaatcaaggacaacatcttcctccgtgggaatgatagttccagagagtgat
gaagaggggaattcccctgtcctgggtggccctgggctgccttttgccttcactttgaac
agtgacacagttgcagaagatcagcaaccagccacagaggaggcctcctcagctgccaga
agaggtgctgctatagagccagagcagtctgaagctgaagtcacaactgaaatccagctt
gaaaagaatcagccttcagtgaaggagagggacaatgacacaaaagtcaagaggggtgca
gggaatggggttgttttagctgggatgatgctggagaggagccaacctcctgcagaggac
agtgacacagatgtggatgatgacagcaggcctcctggaaggccagctgaggtccattta
gaaagggttcagcctcttggcttcatcgacagtgacactgatatagaagaagaggggatc
ccagcaaccccagctgtagttcctatgaagaagaggaagatcttccatggagttggtata
aggggtcctggagcaccagggctggcccatctgcaggagagtcaggctggtagtgataca
gatatggaggagggcaaagccccacaggctgtccctctgaaaaaaagccaagcttccatg
gtgatcaatagcgatacagatgatgaggaagaagtctcagcagcgctgactttagcacgt
ctgaaagagagtcaacctgctctatggaacagagatgcagaagaggacatggcccaacct
gtggtccttctgcagcgaagccaaaccaccactgggagagacagtgacacagatgaggag
gaaaagctcccagtggaaaataaagaagctgtccccaagggtcacacaaagattagagcc
ctttttagagcgcattcagaaaaaaaccaacattcttttagggacagtgataagagtgtg
gaagcagataagagttcacctgggatccacctggagagaagccaagcctccaccacagtg
gacatcaacacacaagtgaaggagtcagccatggtgcctatgcaggggacaaatcaaaca
gatgtggaagcaggtgggggacgagaaaagctgcttgtggtatctctagaagaagcctgg
cctcctccacatgggctctgtgaaacagatgcagaggagggcacctccttggcagcctca
gcagttgcagatgtaagaaagagccagcttccagcagaaggggatgctggggcagagtgg
gcaacagctgttcttaagcaggagagagctcttaaggtgggggcccaaggtcaatcacct
gtggcacaaatggagcaggacctccctatctcaagagagaacctcacagatctggtggtg
gatacagatgctttaggggaatccacccagcgacagggagagggagcccaggtccccaca
ggaagggagagagaaccacatgtgggtggaaccaaggactctaaagacaactgtgatgat
tctgaagatctggacctacaagctacccaatgctttctggagagaaagaatcagagctta
gaagcagtccagagtatggaggatgaacctacccagaccttcatgttgactccaccccaa
gaacctggcccttcccattgcagcttccagacaccaggtagcctagatgaaccatgggag
gtcctggctacacagccattctgtctgagagagtccaaggactctgagacccagcctttt
gacacctaccttgaggcctgtggatcttgcctgtctccacctagggcaataccaggagac
caacatccagagagcccagtccacacagagccaatggggattcaaggcagagagatgcag
actatggataaagatatgggtataccaaaagaaacaacagagaggatggcccctgagaga
gtgccattggagagggaaactgagaaactgatgccagaaagacagacagatgtaacagga
gaggaagaattaaccaggggcatgcaggacagagaacaaaaacagttgttagctagagac
agtcagagacaagaatctggcaaaaagggggaaagtgcaagtcctaaaagaaatagggag
agttcaaaggtagaaattcagacatctgaggaaatacaggagaaagaagtagagaagcag
acccttccaaacaaaacatttgagagagacgtagagagaccagtagcagacagagagtgt
gagccagctgagttagaagggaaggtgcccaaagtgatcctggagagaggcacacagagg
ggggagccagagggagggagccgggaccagaaagggcaggcctccagcccaacaccagag
cctggggtgggggtgagggactttccagaacctgcctcagcccccataccttctgggagc
cagtcaggtgaaaggggatccccagtgagccccaggaggcatcagaaaggcctgaattgc
aagatgccacctgctaagaaggcttccaggatcagagctgctaagaaagcttccaggggt
gatcaggaatctccagatgcttgtctgcatcctacagtgcctgaaacgtcagccccaccc
ctaaagccccttaactctcagagccagaaacgtcttgcacctcagccccttctttctccc
tttccaccttctatcgagccaaccattcctaagaccaggcaaaatgggaatcgggaagct
ccagggactcccttgtcctcagagctggagccttttcatccaaagcctaagatcataact
cagaagtcctccaggatgacaccctttccagctacctcagctgcccttgagccccagcct
tccacctccacaacccatccagacactcccaagcccacatctcaggccactaggggcaag
acaaataggtcctctgtcaagacccctgaaacatttgtccccacagcccctgagctccag
ccttccacttccacagaccagcctgtcacacctgagcccacatttcaggctactagggga
agaaaaaatagattctctgtcaagacccctgaaacagttgtccccacagcccctgagccc
cacccttccacctccagagaccagcctgtcactcccaagcccacatctcaggccactagg
ggcaagacaaataggtcctctatcaagacccctgaaacatttgtacctacagcccctgag
ctccagccttccacctccacaaaccaacttgtcacccatgagtttacgtcttgggctact
aggggcaggacaaataggtcctctgtcaagacccctgaatcaactgtccctgtagcccct
gagctcccaccttccacctccacagaccagcctgtcacccctgagcccacatctcggacc
actaggggcaggacaaataagtcctctgtcaagactcctgaatcagttgtatccacagcc
cctgagctccaaccttgcacctccacagaccagcttgtcacccctgagcccacatctcag
accactaggggcaggacaaataagtccgctgtcaagtcccctgaatcagttgtatccaca
gcccctgagctccaaccttgcacctccacagaccagcttgtcacccctgagcccacatct
cgggctactagaggaagaaaaaatagatcctctgtcaagaaccctgaacgagttatctcc
acagcccctgagctccaggcctccacctccacagaccagcctgtcacccctgagcctaca
tctcaggctactaggcgaagaaaaaataggtcctctgtcaagacccctgaaacagtagtc
cccatagcctctgagctccaggcttctgccttcacagaccagcctgtcacccctgagccc
acatctcaggctactaggggaagaaaaaataggccctctgtcaagacccctgaaacagtt
gtcctcatagcctctgagctccaggcttctgcctccacagaccagcctgtcacccctgag
cccacatctcaggctactaggggaagaaaaaataggtcctctgtcaagacccctgaaaca
gttgtccccatagcctctgagctccaggcttctgcctccacagaccagcctgtcacccct
gagcccacatctcggaccactaggggcaggacaaacaggtcctctgtcaagacccctgaa
tcagtcgtacccacagcccctgagctccaggtttctgcctccacagttcaacctgtaacc
cctgagcctacatctcagaccactaggggcaggacaaataggtcctctgtcaagacccct
gaatcagttgtccctatagcccctgagctccagccttcgacctccagaaaccagcttgtc
acccctgagcccacatctagggccactaggggcaggacagatgggtcttctgtcaggacc
cctgaaccagttgtccccacagcccctgagcccgttcctacaacctccatagaccagcct
gtcacacctaagcccacatctagagccactagaggaagagtaaataggtcctctgtcaag
actcccaaaccagttgaaccagcagcctctaatcttgagcctcttatccccacagacctg
cctgtcacccctgaggccatagctcagggtagtcagagcaaaacactgaggtcttctata
gtaagtgctgtgtccgttcctaccacccttgaattccagtcccctgttaccacagatcag
cctatttcccctgagcctattcctcaagctagttgcagcaagaggcagagagtcattggg
aatcctggctccctcaaaactcccattgaccataagccttgctctgcacccctggaaact
aaatcccaggcctcaaggaaccaaagatggggagcagttagagaagctgaatcccttaca
gccattcctgagcctgcctctttccagcttcttgagacaccaactcatgcctcccagatc
caaaaggtggaagcagtaggtagatctaggtttacctcagagccccagcctaaggtctct
caaagccgcaagaggccttttgctaccacggattcaccaccacttcaaaaacagccccga
agagaagtctcccagaagacagtgtttctcaaggaagagttagaagatactacagagaag
ccagggaaagaagaggatgtcatgactccaaaaccaggcaagaaaaagagagaccaggca
gaggaggagcccaatagcatacagagccgcagcctccgacggaccaaacttacccgggaa
tcaacagcccccaaagtgctcttcacaggagtggtggatgcccagggagagcgggccgtg
ctggcactggggggaagtctggctgattcagcggcagaggcttcccacctggtcactgat
cgaatccgccggacagtcaagttcctgtgtgccctggggcggggaatccccattctctcc
ctggactggctgcatcagtcccgcaaggctggttgcttcttacccccggatgaatatgtg
gtgactgatcctgagcaagagaagaactttggctttagccttcaagatgctctgagccgg
gctcgggagcgaaggctgctggagggctatgagatccatgtgacccctggagtccagcca
ccaccacctcagatgggagagatcatcagctgctgtggaggcactgtcctacccagcatg
cctcggtcctataagcctcagagagttgtgatcacatgctcccaggacttccctcgatgc
tctgttccacgacgggttgggctgcccctcctctcacctgagttcctgctgactggagtg
ctgaagcaggaagccaagccagaggcctttgtcctttcccctttggagatgtcatccacc
tga

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