Callithrix jacchus (white-tufted-ear marmoset): 100411931
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Entry
100411931 CDS
T03264
Symbol
CAPN1
Name
(RefSeq) calpain-1 catalytic subunit isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04141
Protein processing in endoplasmic reticulum
cjc04210
Apoptosis
cjc04217
Necroptosis
cjc04218
Cellular senescence
cjc04382
Cornified envelope formation
cjc05010
Alzheimer disease
cjc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100411931 (CAPN1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
100411931 (CAPN1)
04217 Necroptosis
100411931 (CAPN1)
04218 Cellular senescence
100411931 (CAPN1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
100411931 (CAPN1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
100411931 (CAPN1)
05022 Pathways of neurodegeneration - multiple diseases
100411931 (CAPN1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cjc01002
]
100411931 (CAPN1)
Enzymes [BR:
cjc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
100411931 (CAPN1)
Peptidases and inhibitors [BR:
cjc01002
]
Cysteine peptidases
Family C2: calpain family
100411931 (CAPN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
100411931
NCBI-ProteinID:
XP_035119153
Ensembl:
ENSCJAG00000002371
LinkDB
All DBs
Position
11:119021755..119048883
Genome browser
AA seq
718 aa
AA seq
DB search
MGSRMAEEIITPVYCTGVSAQVQKQRAKELGLGRHENAIKYLGQDYEQLRARCLQSGTLF
RDEAFPPVPQSLGFKELGPNSSKTYGIKWKRPTELLSNPQFIVDGATRTDICQGALGDCW
LLAAIASLTLNDNLLHRVVPHGQSFQDGYAGIFHFQLWQFGEWVDVVVDDLLPIKDGKLV
FVHSAEGNEFWSALLEKAYAKVNGSYEALSGGSTSEGFEDFTGGVTEWYELRKAPSDLYQ
IILKALERGSLLGCSIDISSVLDMEAITFKKLVKGHAYSVTGAKQVNYRGQMVNLIRMRN
PWGEVEWTGAWSDSSSEWNNVDPYEREQLRVKMEDGEFWMSFRDFMREFTRLEICNLTPD
ALKSRTIRKWNTTLYEGTWRRGSTAGGCRNYPATFWVNPQFKIRLDEVDDPDDYGDRESG
CSFVLALMQKHRRRERRYGRDMETIGFAVYEVPPELVGQPAVHLKRDFFLANASRARSEQ
FINLREVSTRFRLPPGEYVVVPSTFEPNKEGDFVLRFFSEKSAGTTELDDQIQANLPDEQ
VLSEEEIDENFKALFRQLAGEDLEISVKELRTILNRIISKHKDLRTKGFSLESCRSMVNL
MDRDGNGKLGLVEFNILWNRIRNYLSIFRKFDLDKSGSMSAYEMRMAIESAGFKLNKKLY
ELIITRYSEPDLAVDFDNFVCCLVRLETMFRFFKTLDTDLDGVVTFDLFKWLQLTMFA
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgggatctaggatggcggaggagatcatcacgcccgtgtactgcaccggggtgtcagcc
caagtgcagaagcagcgggccaaggagctgggcctgggccgccatgagaatgccatcaag
tacctgggccaggattatgagcagctgcgggcacgatgcctgcagagtgggaccctcttc
cgtgatgaggccttccctcctgtgccccagagcctgggtttcaaggagctgggtcccaat
tcctccaagacctatggcatcaagtggaagcggcccacggagctgctgtcaaacccccag
ttcatcgtggatggagccacccgcacagacatctgccagggagcactgggggactgctgg
ctcctggcggccatcgcctccctcactctcaacgacaacctcctacaccgagtggttccg
catggccagagcttccaggatggctatgccggcatcttccatttccagctatggcaattt
ggggagtgggtggatgtggtcgtggatgacctgctgcccatcaaggacgggaagctggtg
tttgtgcattctgctgaaggcaatgagttctggagtgccctgctcgagaaggcctatgcc
aaggtaaatggcagctacgaggccctgtcagggggcagcacctcggagggctttgaggac
ttcacaggcggggtcaccgagtggtacgagttgcgcaaggctcccagcgacctctaccag
atcatcctcaaggccctggagcggggctccctgctgggctgctccatagatatctccagc
gttctagacatggaagccatcacctttaagaagttggtgaagggccacgcctactctgtg
accggggccaagcaggtgaactaccgaggccagatggtgaacctgatccggatgcggaac
ccctggggcgaggtggagtggacaggagcctggagcgacagctcctcagagtggaacaac
gtggacccatatgaacgggagcagctccgggtcaagatggaggatggggagttctggatg
tcattccgagacttcatgcgcgagttcacccgcctggagatctgcaacctcacgcccgac
gccctcaagagccggaccatccgcaaatggaacaccacgctctacgagggcacctggcgg
cgggggagcaccgcggggggctgccggaactacccagccaccttctgggtgaaccctcag
ttcaagatccggctagatgaggtggatgacccggatgactacggggaccgcgagtcaggc
tgcagcttcgtgcttgcccttatgcagaagcatcgccgccgcgagcgccgctatggccgc
gacatggagaccattggcttcgcagtgtatgaggtccctccggagctggtgggccagccg
gctgtgcacttgaagcgcgacttcttcctggccaatgcatctcgggcacgctcagagcag
tttatcaaccttcgagaggtcagcacccgcttccgcctgccacccggggagtacgtggtg
gtgccctccaccttcgagcccaacaaggaaggcgactttgtgctgcgcttcttctcagag
aagagtgctgggaccacggagctggacgaccagatccaggctaatctccccgacgagcaa
gtgctctcagaagaagagattgatgagaacttcaaggccctcttcagacagctggcaggg
gaggacttggagatcagtgttaaggagctgcggacaatcctcaacaggatcatcagcaaa
cacaaagacctgcggaccaagggcttcagcctggagtcgtgccgcagcatggtgaacctc
atggatcgtgatggcaacgggaagctgggcctggtggagttcaacatcctgtggaaccgc
atccggaattacctgtccatcttccggaagtttgacctggacaaatcgggcagcatgagc
gcctacgagatgcggatggccattgagtcggcaggcttcaagctcaacaagaagctttac
gagctcatcatcacccgctactcagagcccgacctggcggttgactttgacaacttcgtg
tgctgcctggtgcggctggagaccatgttccgatttttcaaaactctggacacagatctg
gatggagtcgtgacctttgacttgtttaagtggctgcagctgaccatgtttgcatga
DBGET
integrated database retrieval system
