Callithrix jacchus (white-tufted-ear marmoset): 100411975
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Entry
100411975 CDS
T03264
Symbol
GGPS1
Name
(RefSeq) geranylgeranyl pyrophosphate synthase isoform X2
KO
K00804
geranylgeranyl diphosphate synthase, type III [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc00900
Terpenoid backbone biosynthesis
cjc01100
Metabolic pathways
Module
cjc_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
100411975 (GGPS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cjc01006
]
100411975 (GGPS1)
Enzymes [BR:
cjc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
100411975 (GGPS1)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
100411975 (GGPS1)
2.5.1.29 geranylgeranyl diphosphate synthase
100411975 (GGPS1)
Prenyltransferases [BR:
cjc01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
100411975 (GGPS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
100411975
NCBI-ProteinID:
XP_002760939
Ensembl:
ENSCJAG00000018045
UniProt:
F7EFP1
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All DBs
Position
19:complement(46202613..46215780)
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AA seq
300 aa
AA seq
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MEKTQETVQRILLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNAS
LLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTCQLL
ELHQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNTL
GLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTEN
IDIKKYCVHYLEDVGSFEYTRNTLKELEAKAYKQIDARGGNPELVALIKHLSKMFREENE
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggagaagactcaagaaacagtccaaagaattcttctagaaccctataaatacctactt
cagttaccaggtaaacaagtgagaaccaaactttcacaggcatttaatcattggctgaaa
gttccagaggacaagctacagattattattgaagtgacagaaatgttgcataatgccagt
ttactcatcgatgatattgaagacaactcaaaactccgacgtggctttccagtggcccac
agcatctatggaatcccatctgtcatcaattctgccaattatgtatatttcctcggcttg
gagaaagtcttaacccttgatcacccagatgcagtgaagctttttacctgccaacttttg
gaactccatcagggacaaggcctagatatttactggagggataattacacttgtcccaca
gaagaagaatataaagctatggtgctgcagaaaacaggtggactgtttggattagcagta
ggtctcatgcagttgttctctgattacaaagaagacttaaaaccactacttaatacactt
gggctctttttccaaattagggatgattatgctaatctacactccaaagaatatagtgaa
aacaaaagtttttgtgaagatctaacagagggaaagttttcatttcctactattcatgct
atttggtcgaggcctgaaagcacccaggtgcagaatatcttgcgccagagaacagaaaac
atagacattaaaaagtactgtgtacattatcttgaggatgtaggctcctttgagtacact
cgtaatactcttaaagagcttgaagctaaagcctataaacagattgatgcacgtggtggg
aaccctgagctagtagccctaataaagcacttaagtaagatgttcagagaagaaaacgaa
taa
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