Callithrix jacchus (white-tufted-ear marmoset): 100413857
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Entry
100413857 CDS
T03264
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04014
Ras signaling pathway
cjc04015
Rap1 signaling pathway
cjc04020
Calcium signaling pathway
cjc04024
cAMP signaling pathway
cjc04080
Neuroactive ligand-receptor interaction
cjc04713
Circadian entrainment
cjc04720
Long-term potentiation
cjc04724
Glutamatergic synapse
cjc05010
Alzheimer disease
cjc05014
Amyotrophic lateral sclerosis
cjc05016
Huntington disease
cjc05017
Spinocerebellar ataxia
cjc05020
Prion disease
cjc05022
Pathways of neurodegeneration - multiple diseases
cjc05030
Cocaine addiction
cjc05031
Amphetamine addiction
cjc05033
Nicotine addiction
cjc05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
100413857 (GRIN1)
04015 Rap1 signaling pathway
100413857 (GRIN1)
04020 Calcium signaling pathway
100413857 (GRIN1)
04024 cAMP signaling pathway
100413857 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100413857 (GRIN1)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
100413857 (GRIN1)
04720 Long-term potentiation
100413857 (GRIN1)
09159 Environmental adaptation
04713 Circadian entrainment
100413857 (GRIN1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
100413857 (GRIN1)
05014 Amyotrophic lateral sclerosis
100413857 (GRIN1)
05016 Huntington disease
100413857 (GRIN1)
05017 Spinocerebellar ataxia
100413857 (GRIN1)
05020 Prion disease
100413857 (GRIN1)
05022 Pathways of neurodegeneration - multiple diseases
100413857 (GRIN1)
09165 Substance dependence
05030 Cocaine addiction
100413857 (GRIN1)
05031 Amphetamine addiction
100413857 (GRIN1)
05033 Nicotine addiction
100413857 (GRIN1)
05034 Alcoholism
100413857 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cjc04040
]
100413857 (GRIN1)
Ion channels [BR:
cjc04040
]
Ligand-gated channels
Glutamate (ionotropic)
100413857 (GRIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
DUF6724
Motif
Other DBs
NCBI-GeneID:
100413857
NCBI-ProteinID:
XP_035119966
Ensembl:
ENSCJAG00000012981
LinkDB
All DBs
Position
1:182628802..182659363
Genome browser
AA seq
959 aa
AA seq
DB search
MSTMRLLTLALLFSCSVARAACDPKIVNIGAVLSTRKHEQMFREAVNQANKRHGSWKIQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFYRIPVLG
LTTRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYSWNHVILLVSDDHEGRAAQKRL
ETLLEERESKSKKRNYENLDQLSYDNKRGPKAEKVLQFDPGTKNVTALLMEAKELEARVI
ILSASEDDAATVYRAAAMLNMTGSGYVWLVGEREISGNALRYAPDGILGLQLINGKNESA
HISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYADGVTGRVE
FNEDGDRKFANYSIMNLQNRKLVQVGIYNGTHVIPNDRKIIWPGGETEKPRGYQMSTRLK
IVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVICTGPNDTSPGSPRHTVPQCCYGFC
IDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTI
NNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYL
LDRFSPFGRFKVNSEDEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGF
AMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVEL
STMYRHMEKHNYESAAEAIQAVRDSKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFG
IGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFML
VAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKAT
FRAITSTLASSFKRRRSSKDTSTGGGRGALQNQKDTVLPRRAIEREEGQLQLCSRHRES
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgcgcctgctgacgctcgccctgctcttctcctgctccgtcgcccgcgcc
gcgtgcgaccccaagatcgtcaacatcggcgcggtgctgagcacgcggaagcacgagcag
atgttccgcgaggccgtgaaccaggccaacaagcggcacggttcctggaagatccagctc
aacgccacgtccgtcacgcacaagcccaacgccatccagatggctctgtcggtgtgcgag
gacctcatctccagccaggtctacgccattctggttagccacccgccaaccccaaacgac
cacttcactcccacccccgtctcctacacagccggcttctaccgcattcctgtgctgggg
ctgaccacccgcatgtccatctactcggacaagagcatccacctgagcttcctgcgcacc
gtgccgccctactcccaccagtcgagcgtgtggttcgagatgatgcgtgtctacagctgg
aaccacgtcatcctgctggtcagcgacgaccacgagggccgggcggctcagaagcgcctg
gagacgctgctggaggagcgcgagtccaagagtaaaaaaaggaactatgaaaacctcgac
caactgtcctatgacaacaagcgcggacccaaggcggagaaggtgctgcagtttgaccca
gggaccaagaacgtgacggccctgctgatggaggcgaaagagctggaggcccgggtcatc
atcctctctgccagcgaggacgatgctgccaccgtgtaccgcgcagccgcgatgctgaac
atgacgggctccgggtacgtgtggctggtcggggagcgcgagatttcggggaacgccctg
cgctacgccccagacggcatcctcgggctgcagctcatcaacggcaagaacgagtcggcc
cacatcagcgacgccgtgggcgtggtggcccaggccgtgcacgagctcctcgagaaggag
aacatcaccgacccgccgcggggctgcgtgggcaacaccaacatctggaagaccgggccg
ctcttcaagagagtgctgatgtcttccaagtatgcggatggggtgaccggccgcgtagag
ttcaatgaggatggggaccggaagtttgccaactatagcatcatgaacctgcagaaccgc
aagctggtgcaagtgggcatctacaacggcacccacgtcatccctaatgacaggaagatc
atctggccaggtggagagacagagaagcctcgagggtaccagatgtccaccagactgaag
attgtgacgatccaccaggagcccttcgtgtacgtcaagcccacgctgagtgacgggaca
tgcaaagaggagttcacagtcaacggcgacccggttaagaaggtgatctgcaccggaccg
aacgacacgtcgccgggcagcccccgccacacggtgcctcagtgctgctacggcttctgc
atcgacctgctcatcaagctggcccggaccatgaacttcacctacgaggtgcacctggtg
gccgatggcaagttcggcacacaggagcgggtaaacaacagcaacaagaaggagtggaac
gggatgatgggcgagctgctcagcgggcaggcagacatgatcgtggcgccgttgaccatc
aacaacgagcgcgcgcagtacatcgagttttccaagcccttcaagtaccagggcctgacc
attctggtcaagaaggagatcccccggagcacgctggactcgttcatgcagccgttccag
agcacactgtggctgctggtggggctgtcggtgcacgtggtggcggtgatgctatatctg
ctggaccgcttcagccccttcggtcgattcaaggtgaacagcgaggatgaggaggaggac
gcactgaccctgtcctcggccatgtggttctcctggggcgtcctgctcaactccggcatc
ggggaaggcgccccgagaagcttctccgcgcgcatcctgggcatggtgtgggccggcttt
gccatgatcatcgtggcctcctacactgccaacctggcggccttcctggttctggaccgg
ccggaggagcgcatcacaggcatcaacgaccctcggctgaggaacccctcggacaagttc
atctatgccacggtgaagcagagctccgtggacatctacttccggcggcaggtggagctg
agcaccatgtaccggcacatggagaagcacaactatgagagcgcagcggaggccatccag
gccgtgagggacagcaagctgcacgccttcatctgggactcagcagtgctggagttcgag
gcctcgcagaagtgcgacctggtgacgacaggagagctgttctttcgctctggctttggc
atcggcatgcggaaagacagcccctggaagcagaacgtgtccctgtccatcctcaagtcc
catgagaatggcttcatggaagacctggacaagacgtgggttcggtatcaggaatgtgac
tcacgcagcaatgcccctgcgaccctcacttttgagaacatggcaggggtcttcatgctg
gtggctgggggcatcgtggctgggatcttcctgattttcattgagattgcctacaagcgg
cacaaggacgcccgccggaagcagatgcagctggcttttgcagcagtgaacgtgtggagg
aagaacctgcaggatagaaagagtggtagagcagagcctgaccctaaaaagaaagccaca
tttagggctatcacctccaccctggcttccagcttcaagaggcgtaggtcctccaaagac
acgagcaccgggggtggacgcggcgctttgcaaaaccaaaaagacacagtgctgccgcga
cgcgctattgagagggaggagggccagctgcagctgtgttcccgtcatagggagagctga
DBGET
integrated database retrieval system
