Campylobacter jejuni subsp. jejuni 00-2544: N755_00513
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Entry
N755_00513 CDS
T02843
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cjen
Campylobacter jejuni subsp. jejuni 00-2544
Pathway
cjen03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cjen00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
N755_00513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjen03021
]
N755_00513
03400 DNA repair and recombination proteins [BR:
cjen03400
]
N755_00513
Enzymes [BR:
cjen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
N755_00513
Transcription machinery [BR:
cjen03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
N755_00513
DNA repair and recombination proteins [BR:
cjen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
N755_00513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
AGV47362
LinkDB
All DBs
Position
477895..482022
Genome browser
AA seq
1375 aa
AA seq
DB search
MLDNKLGNRLRVDFSNISKQIEIPNLLQLQKKSFDYFLNLDNGESGIEKVFKSIFPIHDP
QNRLSLEYVSSEIGKPKYTIRECMERGLTYSVNLKMKIRLTLHEKDEKTGEKVGVKDIKE
QEIYIREIPLMTDRVSFIINGVERVVVNQLHRSPGVIFKEEESSTVANKLVYTAQIIPDR
GSWLYFEYDAKDVLYVRINKRRKVPVTMLFRALGYKKQDIIKLFYPIQTIHVKKDKFLTE
FNPNDFMDRIEYDIKDEKGKIVHQAGKRLTKKKAEQLIKDGLKWIEYPVEILLNRYLANP
IIDKESGEVLFDSLTLLDESKLAKIKEQKSFDIANDLANGVDAAIINSFAQDGETLKLLK
QSENIDDENDLAAIRIYKVMRPGEPVVKDAAKAFVNDLFFNPERYDLTKVGRMKMNHKLG
LEVPEYVTVLTNEDIIKTAKYLIKVKNGKGHIDDRDHLGNRRIRSIGELLANELHLGLAK
MQKAIRDKFTSLNADLDKVMPYDLINPKMITTTIIEFFTGGQLSQFMDQTNPLSEVTHKR
RLSALGEGGLVKERAGFEVRDVHATHYGRICPVETPEGQNIGLINTLSTYAKVNELGFVE
APYRKVVNGKVTNEVVYLTATQEEGLFIAPASTKVDAKGNIVEEFVEARQDGETILARRE
EVQLIDLCSGMVVGVAASLIPFLEHDDANRALMGSNMQRQAVPLLTASAPIVGTGMEQII
ARDAWEAVKAKRGGVVEKVDNKSIFILGEDDKGPFIDHYTMEKNLRTNQNTNYIQHPIVK
KGDIVKAGQIIADGPSMDQGELAIGKNALIAFMPWNGYNYEDAIVVSERIIREDTFTSVH
IYEKEIEARELKDGIEEITKDIPNVKEEDVAHLEESGIAKIGTHIKPGMILVGKVSPKGE
VKPTPEERLLRAIFGEKAGHVVNKSLYATASLEGVVVDVKIFTKKGYEKDDRAIKSYDKE
KMALEKEHHDRLLMMDREEMLRVCALLSKASLNSDQKIGDKNYKKGQTADISELEKINRF
TLTTLIKAYSKEIQKEYDDLKNHFQNEKKKLKAEHDEKLEILEKDDILPSGVIKLVKVYI
ATKRKLKVGDKMAGRHGNKGIVSTIVPEVDMPYLPNGKSVDIALNPLGVPSRMNIGQILE
SHLGLVGLRLGDQIQEIFDRKQKDFLKELRAKILEICSIPRLANEKEFIKSLSDEELLNY
ARDWSKGVKFSTPVFEGVNIEEFSKLFKMAKIDMDGKTELYDGRTGEKIAERVHVGCMYM
LKLHHLVDEKVHARSTGPYSLVTQQPVGGKALFGGQRFGEMEVWALEAYGAAHTLREMLT
IKSDDVEGRFSAYKALTKGENVPATGIPETFFVLTNELKSLALDVEIFDKDEDNE
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atgttagataataaattaggaaatcgtttaagagtagacttctcaaacatttcaaaacaa
atagaaatcccaaatcttctacaattacaaaaaaagagttttgattattttttaaatctt
gataatggtgaaagtggtatagaaaaagtttttaaatcaatttttcctattcatgatccg
caaaatagattgagtcttgaatatgttagtagtgaaataggcaagccaaaatataccatt
cgcgaatgcatggaaagaggtttgacttattctgtaaatttaaaaatgaaaatccgtctt
actctgcatgaaaaagatgaaaaaacaggggaaaaagttggcgtaaaagatattaaagaa
caagaaatttatatccgcgaaattcctttaatgacagatcgtgtatcttttatcattaac
ggggttgagagagtggttgtaaatcaattacatagaagccctggtgttatttttaaagaa
gaagaaagttcaacggttgcaaataagcttgtttatacagcacaaattattcctgatcgt
ggttcgtggctttattttgaatacgatgccaaagatgttttgtatgtaagaatcaataag
cgtagaaaagttcctgtaactatgctttttagagctttagggtataaaaaacaagatatt
attaagttgttttatcctattcagactatacatgtgaaaaaagataaatttttaacagaa
tttaatccaaatgattttatggatagaatagaatatgatattaaagatgaaaaaggaaaa
atcgttcatcaagctggaaaaagacttacaaagaaaaaagcagaacagcttattaaagac
ggtttaaaatggatagaatatcctgtagaaattttacttaatcgttatttagcaaatcct
attattgataaagaaagtggagaggttttatttgattctttaactttgttagatgagagt
aagcttgctaagattaaagagcaaaaaagttttgatatagcaaatgacttggctaatggc
gttgatgcagcgattattaactcctttgcccaagatggagaaactctaaaacttcttaaa
caaagtgaaaatatcgatgatgaaaatgatttagctgcgattagaatttacaaagttatg
cgcccaggtgaacctgtggtaaaagatgcagcgaaggcttttgtaaatgatttattcttc
aatcctgaaagatacgatcttaccaaggtaggtcgtatgaaaatgaaccataaattaggt
cttgaagtacctgagtatgttactgttttgactaatgaagatattattaaaactgcaaaa
tatttaattaaagtaaaaaatggtaaaggacatattgatgatagagatcatttaggaaat
cgtcgtatccgttctataggtgaacttttagccaatgaacttcatttaggtcttgcaaaa
atgcaaaaggcgatcagagataaatttacttctttaaatgcggatcttgataaagtaatg
ccttatgatttaatcaatcctaaaatgattactacaactatcattgaattttttacagga
ggtcagctttcgcaatttatggatcaaaccaaccctttaagcgaggttactcataagcgt
cgtttgtcagcgcttggtgaaggtggacttgtaaaagaaagagcaggttttgaagtgcgt
gatgttcacgcgacacattatggtagaatttgtccagttgaaacacctgaaggtcaaaat
attggtttgattaacactctttctacttatgcaaaagtaaatgaacttggctttgttgaa
gcgccatatagaaaagttgtaaatggtaaagtgactaatgaagttgtttatcttacagcg
acacaagaagaaggcttgtttatcgcaccagcttcaactaaggttgatgctaaaggcaat
atagtagaagaatttgttgaggctaggcaagatggtgaaactatacttgcaagacgcgaa
gaagtgcaattaatcgatctttgctcaggtatggttgttggagttgcagcttctttgatt
ccgtttttagagcacgatgatgcaaacagagcgctaatgggttcaaacatgcaacgtcaa
gctgtgccacttcttactgcttcagctccgatagtaggaacaggtatggaacaaattatt
gcgcgtgatgcttgggaagctgttaaagcaaagcgtggcggtgtggttgagaaagtggat
aataaaagcattttcattttaggtgaagatgataaaggtccatttattgaccattacact
atggagaaaaatttaagaaccaatcaaaatacaaattatattcaacaccctattgttaaa
aaaggtgatatagtaaaagcaggacaaattatcgcagatggtccttctatggatcaaggc
gaacttgctataggtaaaaatgctttaatcgcttttatgccttggaatggttataactat
gaggatgctatagttgtaagtgagagaattattcgtgaagatacttttacaagcgtgcac
atttatgaaaaagaaattgaagcaagagaactaaaagacggtatagaagaaattaccaaa
gatattccaaatgtaaaagaagaagatgttgcgcatcttgaggagagcggtattgcaaaa
attggtacccatatcaaaccaggtatgattttggtgggtaaggtttctccaaaaggtgag
gttaaaccaactcctgaagaaagacttttaagagcgatttttggagaaaaagcaggacat
gttgtgaataaatccctttatgcaaccgcttctttagagggtgttgttgtggatgttaaa
attttcactaaaaaaggctatgaaaaagatgatcgcgcaataaaatcttatgataaagaa
aaaatggctttagaaaaagagcatcatgatagacttttgatgatggatagagaagaaatg
cttcgtgtttgtgctcttctttccaaagcctctttaaatagcgatcaaaaaattggagat
aaaaattataaaaaaggacaaactgcagatattagcgaacttgaaaaaatcaatcgtttt
actttaacaactttgattaaagcttattctaaagagattcaaaaagaatacgatgattta
aaaaatcatttccaaaatgagaagaaaaaattaaaagcagaacacgatgaaaagcttgaa
attttagaaaaagatgatattttaccaagtggggtaattaagcttgttaaagtttatatt
gctacaaaaagaaagcttaaagtcggtgataaaatggcaggacgtcatggaaataaaggt
atagtttcaactatagttcctgaagtagatatgccttatttgccaaatggtaagagcgtg
gatattgcgcttaatccacttggcgttccaagtcgtatgaatataggtcaaattttagaa
agtcatttaggtttagttggacttagacttggggatcaaattcaagaaatttttgataga
aagcaaaaagattttcttaaagaattaagagcgaaaatacttgaaatttgttctattcca
agacttgcaaacgaaaaagaatttattaaaagcttaagcgatgaagagcttttaaactat
gctagagactggagtaaaggagttaaattttctactcctgtttttgaaggtgtaaatata
gaagaatttagcaagctttttaaaatggctaagatagatatggatggcaaaacagaactt
tatgatggacgcacgggggaaaaaattgcagagcgtgttcatgtaggatgtatgtatatg
ctaaaactccatcacttggttgatgaaaaagttcatgcaagaagtacaggaccttatagc
ttggttacccaacaacctgtgggtggtaaagcactctttgggggacaaagatttggagaa
atggaagtttgggcacttgaagcttatggagcggctcacactttaagagaaatgttaacc
ataaaatcagatgatgtagaaggtagatttagtgcctataaagcattgacaaaaggtgaa
aatgttccagcaacaggaattcctgaaacattttttgtattaaccaatgagcttaaatct
cttgctttagatgttgagatttttgataaggatgaagataatgagtaa
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