Campylobacter jejuni subsp. jejuni 00-2544: N755_01006
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Entry
N755_01006 CDS
T02843
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
cjen
Campylobacter jejuni subsp. jejuni 00-2544
Pathway
cjen02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cjen00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
N755_01006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjen03021
]
N755_01006
Transcription machinery [BR:
cjen03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
N755_01006
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_ner
Sigma70_r4_2
MCR_beta_N
SieB
Motif
Other DBs
NCBI-ProteinID:
AGV47847
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All DBs
Position
971145..973013
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AA seq
622 aa
AA seq
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MNAKTQEAELEELFQENAKDYITYEKLVKYLTKQPSASTTKKVQALMKKHKVQLFSAAEI
AQMKNIEDAKRLQEEKQKLQDTSLENEFDLANENDLLEWSRSDSPVRMYLREMGQIALLN
KDEEIEISKKIELGEDIIIDAFCSVPYLIDFILDYKEPLINRERRVKELFKSFDDEEKSD
DKLDELDIDEDEENETELESDEENTKKNSKKEDERTLKVIEKFKALEKAKKDWLKTSKDK
ESGDELLDKLSIAFKKNILKEKLMDLGPTSKLISEIVKSMETALKSDEEFDKELKRLEYR
LPMFSDELKKRHADILKDITKLSKEEITERALETTMVSTYMEIKKLFQTKEASEKSFDLE
KSRLKEILEQIKRGKKISDEAKGRMAKSNLRLVVSIAKRYTNRGLPFLDLIQEGNIGLMK
AVDKFEYKRGYKFSTYATWWIRQAISRAIADQARTIRIPIHMIETINQINKIIREHLQKD
GKEPDVSVIAKEVGLSVDKVKQVIKITKEPISLEAPIGNEDDGKFGDFVEDRNSLSPMDH
ILKDDLKEQIDEVLDQLNDREKAVIRMRFGLMDDESDRTLEEIGKELNVTRERVRQIESS
AIKKLKHPKVGRKLKNYIEGWK
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccaaaactcaagaagctgaattagaagaattatttcaagaaaatgcaaaagat
tatatcacatatgaaaaattggtaaaatatcttacaaaacaaccaagtgcatcaaccact
aaaaaagtgcaagcattaatgaaaaaacacaaagtgcaacttttttcagcagctgaaatt
gcacaaatgaaaaacatagaagatgcaaaaagacttcaagaagaaaaacaaaaactccaa
gatacaagccttgagaacgaatttgatttagccaatgaaaacgatttattagaatggagc
agatcagactctcctgttcgtatgtatttaagagaaatgggacaaattgctttattaaac
aaagatgaagaaattgaaatttccaaaaaaatagaacttggcgaagatattatcattgat
gctttttgttctgtaccttatttgatagattttattttagattataaagaacctttaata
aacagagaaagaagggtaaaagaactatttaaaagctttgacgatgaagaaaaaagtgat
gacaaacttgatgaacttgatatagatgaagatgaagaaaacgaaacagaattagaatca
gatgaagaaaatactaaaaaaaacagcaaaaaagaagatgaaagaactttaaaagttata
gaaaaatttaaagctctagaaaaagctaaaaaagattggctaaaaacatccaaagacaaa
gaaagcggagatgaacttttagataaattaagcattgcgttcaaaaaaaatattttaaaa
gaaaaattaatggatctaggccctacttcaaaacttattagcgaaatcgtaaaatcaatg
gaaactgcactaaaaagtgatgaagaatttgacaaagaacttaagcgtttagaataccgc
ttacctatgttttctgatgaacttaaaaaacgccatgcagatattttaaaagatattaca
aaattgagcaaagaagaaatcacagagcgagctttagaaacaaccatggtaagcacttat
atggaaattaaaaaactatttcaaactaaagaagccagtgaaaaaagctttgatcttgaa
aaatcacgcttaaaagaaattttggagcaaattaaacgcggtaaaaaaatctctgatgaa
gcaaaaggaagaatggcaaaatcaaacttgcgccttgttgtaagcatagctaaacgctac
acaaatcgtggtctgcctttcttagaccttatccaagaaggaaatataggtttgatgaaa
gctgtggataaatttgaatacaaaaggggttataaattttccacttatgcaacttggtgg
atcaggcaagctatttcaagggctatagctgatcaagcaagaaccataagaattccaatc
catatgatagaaaccatcaatcaaattaacaaaattatccgcgaacatctacaaaaagat
ggaaaagaacctgatgtcagtgttatagctaaagaagtaggtttaagcgtagataaggtt
aaacaagttattaaaatcacaaaagaaccaatttctcttgaagctccaataggaaatgaa
gatgatggtaaatttggagattttgttgaagatagaaattcactttctccaatggatcat
atcttaaaggatgatttaaaagaacaaattgatgaagttttagatcaattaaacgataga
gaaaaagcggtaattcgtatgcgttttggtttaatggatgatgaaagtgatagaacttta
gaggaaattggaaaggaacttaatgtcactcgagaaagagtgagacaaatagaaagctca
gctataaaaaaactcaaacaccctaaagtaggaagaaaactaaaaaattatatagaaggt
tggaagtaa
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