Cryptomeria japonica (Japanese cedar): 131048186
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Entry
131048186 CDS
T10556
Name
(RefSeq) uncharacterized protein LOC131048186 isoform X1
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131048186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjf03019
]
131048186
03016 Transfer RNA biogenesis [BR:
cjf03016
]
131048186
Enzymes [BR:
cjf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
131048186
Messenger RNA biogenesis [BR:
cjf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
131048186
Transfer RNA biogenesis [BR:
cjf03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
131048186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
PAP_NTPase
TUTase
Polbeta
DNA_pol_B_palm
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
131048186
NCBI-ProteinID:
XP_057838059
LinkDB
All DBs
Position
6:555460637..555508940
Genome browser
AA seq
661 aa
AA seq
DB search
MATGEHPSFIYDTLLPLLGQDDLSYESPSGEILLEEAPDISPNTKFSNRKIKTKNSTPAM
GTDEELQFLKTTRVSSPEPWLERGLTVLRREIGDAEDAMCKESSDGEIEYLSLEVSCSNL
PEDPSAEPVTPVMVSQVEDKLKAVIEFPWSDSHKKITSPLLLLHQEIIDFCHFLSPTPEE
QAARLAAIGRVSDVVKSIWPNCEVKIFGSFETGLYLPISDIDVVILNSNIQVPQNGLQAL
AKALSKKSIATKMQVIGKARVPIVKFIEKESNVAFDISFDVQNGPEAAKFIKDAISKIPP
LRPLCLILKIFLQQRELNEVYSGGIGSYALLVMLITHLQVHWSRQCSTGRSILERNLGIL
LVWAQFVGGSIQISRKTLWVCWGRIQIDFFELYGRKLNAHDVGVSCRFGGQFFRKSLRGF
LNPKRPHLLSVEDPQAPENDIGKNSYNILQVRAAFVMAFRKLTDTYIDDLISSQNSILGR
IIKIDAKLLERVGRLTKSPQLDAFLATASDHALRYKSNSDADETALHPVMKNQGSLLNRW
QLCDDEPLPRGPPSAKSGLKRKWKEEKQFAKRFKRKNDKNVSPSVKKQEIHFTTQHSKGR
KSKKRKHVSGDEDNSPTRHGSRYKKSKISSVKVEHKHLRSGNNNNFGARTSNYHAAKFKY
S
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaggcgagcacccttcctttatttatgacactctcttacctctgctgggccag
gatgatctttcctacgaatctccttctggagaaattttgcttgaagaagcccccgatatt
tctccaaacactaaattcagcaacagaaagataaagactaagaattctacacctgccatg
ggaactgatgaagagctccaatttctcaaaacaacgagggtttccagtccagaaccgtgg
ttggagaggggtcttactgttttacggcgggagataggtgacgcagaagatgctatgtgc
aaggaatccagtgacggagaaatagagtatttgtcccttgaggtctcatgttcgaacttg
ccggaggatcccagtgctgagccggttacccctgtgatggtttcacaggttgaggacaag
ttaaaggctgttattgagtttccctggagtgattctcacaaaaagataacgagccccctg
ctattgcttcatcaagaaattatagatttttgtcattttctttcaccaactccagaagag
caagcagcacgcctagcagcaattggacgtgtttcggatgtcgtcaaatctatatggccc
aattgtgaagtgaaaatctttggatcatttgagacaggtctgtatttgcccatcagtgac
attgatgtggttatcttaaattctaacattcaagtgcctcaaaacggcctgcaagcccta
gcaaaagcactgtcgaaaaagtccattgcaactaaaatgcaggttattggaaaagctagg
gttccaattgtcaagtttattgagaaggaaagtaatgtggcatttgatatcagctttgat
gtgcaaaatggaccagaggctgcaaaatttattaaggatgccatctcaaaaattcctcct
ctaagaccactatgcctcatattgaaaatatttttgcagcaacgggagctcaatgaggtt
tattctgggggcattggctcgtatgctttgcttgttatgttgataacacatctgcaggtg
cattggagtcgacaatgttctacaggcaggtctattttggaacgtaacctaggtatttta
ctggtttgggcccagttcgtaggggggtccatccagatttctcgcaaaacactttgggtt
tgttggggacgaatccagattgatttttttgaactctatggccgtaagctcaatgcacat
gatgtcggagtatcttgcagatttggtggacagttcttccgtaagagtctaagaggattt
ctcaacccaaagcgtccacacttgctctctgtggaagatcctcaagcaccagaaaatgac
atcgggaagaattcatataatattttgcaggtgagggcagcatttgtaatggcttttcga
aaactgacagatacttatattgatgatttgatatcttcccagaatagcattctgggacga
ataataaagatagacgctaaattactggaaagggtgggtaggttgactaaaagtccacag
ttggatgcctttttggcaacagcaagtgatcatgctcttagatataaatctaattcggat
gctgatgaaacagcactgcaccctgtcatgaaaaatcaagggtctttgttaaacaggtgg
caattatgtgatgatgaaccattaccacgtgggccgcctagtgccaaaagtgggttgaaa
agaaaatggaaggaagaaaagcaatttgccaagagattcaagaggaagaacgacaagaat
gtttccccaagtgtcaaaaaacaggagattcattttaccacgcagcattctaagggccgc
aaatctaagaaacgtaaacatgtcagtggagatgaagataactctccaacaagacacggg
tcacgctacaaaaagtctaaaatttctagtgtaaaagtagagcataaacatttaagaagt
ggtaacaataacaattttggtgcaagaactagtaattatcatgcagcaaagttcaagtac
tcctag
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