Cryptomeria japonica (Japanese cedar): 131060986
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Entry
131060986 CDS
T10556
Name
(RefSeq) polyubiquitin isoform X1
KO
K08770
ubiquitin C
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131060986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjf04121
]
131060986
Ubiquitin system [BR:
cjf04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
131060986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
TBK1_ULD
DUF2604
Motif
Other DBs
NCBI-GeneID:
131060986
NCBI-ProteinID:
XP_059067066
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All DBs
Position
9:547894261..547991918
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AA seq
685 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLADYNIQKESTLHLVLRLRGGF
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgcagatttttgtgaagactcttactggcaaaaccatcactctggaagttgagagctca
gacactattgataatgttaaaactaagatccaagacaaggaaggcattcccccagaccag
cagagacttatttttgctggaaagcagcttgaggatggacgaacccttgcggactacaac
atccaaaaggaatccacactccacctggttctccgtctcaggggagggatgcaaatcttt
gttaaaaccctgactggaaagaccattacccttgaagtggaaagttctgacacaatcgac
aatgttaaggcaaagattcaagacaaggagggaattccccctgaccagcaaaggctcatt
tttgctggaaaacagcttgaagatggtagaacattagctgattataacattcagaaggaa
tctacacttcatcttgtgctccggttgaggggaggtatgcagatatttgttaaaacccta
actgggaagaccatcactttagaagtcgagagctctgataccattgataatgtcaaggcc
aagatccaggataaggaaggcatcccaccagaccagcagaggcttatctttgcgggaaag
cagctcgaggatggacggacccttgctgattacaacatccaaaaggaatccacactgcac
cttgtcctccgtcttagggggggaatgcaaatctttgttaaaaccctgactggaaagaca
attacccttgaagtggagagctcagacactatagacaatgtgaaggccaagattcaggac
aaggagggtattccccctgaccagcaaaggctcatctttgctggaaaacaacttgaagat
ggtagaactttagctgattataacattcagaaggaatccactctccatcttgtgcttcgt
ctgaggggaggaatgcaaatctttgtcaaaacgctcactgggaagactatcacactagaa
gtcgagagctctgacaccattgataatgtgaaagccaagatccaggataaggaaggtatt
ccaccagatcagcagaggcttatatttgccgggaaacagcttgaggatggacggacctta
gcggattacaacatccaaaaggagtccacactccatttagttctccgtctgaggggaggt
atgcaaatctttgttaaaactctaactggaaagaccattactcttgaagtggaaagctca
gacactatcgacaatgtgaaggccaagattcaagacaaggagggaattcccccagaccag
cagaggctcatctttgctggaaaacagcttgaagatggtagaacattggctgattataat
attcagaaggaatccacccttcatcttgtgctccgtttgaggggagggatgcaaatcttt
gtcaaaacccttactggaaagaccatcactcttgaagtggaaagctcagacactatcgac
aatgtgaaggccaagattcaagacaaggagggaatccccccagaccagcagaggctcatc
tttgctggaaaacagcttgaagatggtagaacattggctgattataatattcagaaggaa
tccacccttcatcttgtgctccgtttgaggggaggcatgcaaatctttgtcaaaaccctt
actggaaagaccatcactcttgaagtggaaagctcagacactatcgacaatgtgaaggca
aagattcaagacaaggagggaattcccccagaccagcagaggctcatctttgctggaaaa
cagcttgaagatggtaggacattggctgattataacattcagaaggaatccacccttcac
cttgtgctccgtttgaggggaggtatgcaaatatttgtcaaaacccttactggaaagact
atcaccctagaagttgagagctcggacaccattgataatgtgaaggcgaaaatccaggac
aaggaaggcattcctccagaccagcagaggctgatcttcgcaggaaaacaacttgaagat
ggtcgtactctggcggattataatattcagaaagagtcaaccctacaccttgttcttcgt
cttcgtggtggattttag
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