Cryptomeria japonica (Japanese cedar): 131068885
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Entry
131068885 CDS
T10556
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf00040
Pentose and glucuronate interconversions
cjf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131068885
Enzymes [BR:
cjf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131068885
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
131068885
NCBI-ProteinID:
XP_057860141
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Position
3:760858098..760861069
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AA seq
425 aa
AA seq
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MATSQSFLSLLFSVAIFLVHSEMAKSIETFANIRNQSVGQTLSQNAVEKPELVVQMVERS
INTSRRELGYFSCGTGNPIDDCWRCDPNWVNNRQRLADCTMGFGRNALGGQNGRFYVVTD
PNDYDPVNPRPGTLRHAVIQTEPLWIIFQRDMVIQLKEELLMNSYKTIDGRGVNVHIANG
PCITIDSVSNIIIHGIHIHDCKPAGNAKVRKSPTQNGFRPRSEGDGISIHGGREIWVDHC
SLSSCTDGLIDAIKGSTAITISNNFFSHHDKVMLLGHSDSYKQDVNMQVTIAFNHFGEGL
VQQMPRCRLGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFIAPNSPFHKQVTKRENTA
GSVWRHWNWRSQGDRMLNGAFFVPSGVGAYSIYAKASSVEARPSSLVSSLTGAAGVLTCR
KGSRC
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggccaccagtcaatccttcctgtctctgcttttctcagttgctatctttttggttcac
tctgaaatggccaagtcaattgaaacttttgcaaacatcaggaaccagtcagtgggacaa
actctgtctcaaaatgctgttgagaagcctgagcttgttgtccaaatggtagaaaggagt
atcaatacttctagaagggagctgggctatttctcctgtggaacggggaaccccattgat
gactgttggcgctgtgatcccaattgggttaacaacagacaaaggctggccgactgtaca
atgggatttggtcgaaacgctcttggaggtcaaaatggcagattttacgttgttactgat
cccaatgactatgatcctgtcaatccacgcccaggcactctgcgccatgctgtcattcaa
actgagcctctctggattattttccaaagagatatggtgattcagctcaaggaggagctt
ctcatgaacagttataagactattgatggtagaggagtcaacgttcatatagcaaatgga
ccttgcattacaatagactctgtgagcaatatcatcattcatggaatacatatacatgat
tgtaaaccagcaggaaatgcaaaggtgaggaaatcccccacccagaatgggtttagacct
cgcagtgaaggagatgggatttctattcatggaggaagagaaatatgggtagaccactgt
tcattgtcaagctgcacagacggattgatcgatgccattaaaggatccactgctatcact
atttcaaacaactttttctcacaccacgacaaggtgatgcttctaggacacagtgactcc
tataaacaagatgttaatatgcaagttactattgcattcaaccactttggagaagggctt
gttcaacaaatgccaaggtgtcggcttggatactttcatgtggtgaacaatgattacacc
cactgggaaatgtacgccataggaggaagtgcaaaccccaccattaacagtcaaggcaat
agattcattgccccaaatagcccatttcacaagcaggtgacaaagcgtgaaaatacagca
ggcagtgtatggaggcattggaattggaggtcacaaggagatagaatgttaaacggggcc
ttctttgttccctcaggtgttggagcatattcaatctatgcaaaagcttcaagcgtagaa
gcaaggccatcatctcttgtgtcttctctcaccggagctgcaggtgttctcacctgcaga
aaaggttcccgctgttag
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