Cryptomeria japonica (Japanese cedar): 131070825
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Entry
131070825 CDS
T10556
Name
(RefSeq) oligouridylate-binding protein 1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjf03019
]
131070825
03041 Spliceosome [BR:
cjf03041
]
131070825
Messenger RNA biogenesis [BR:
cjf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
131070825
Spliceosome [BR:
cjf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
131070825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
131070825
NCBI-ProteinID:
XP_057862469
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All DBs
Position
11:complement(27235943..27243251)
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AA seq
481 aa
AA seq
DB search
MYAVSQPQLQQQGVAGGAVGTADQQLQLRLKQQQLMQQAMLQQQQGLYHPGLLQPISQIE
PIPSGNLPPGFDSSSCRSVYVGNIHVNVTESLLAEVFGSIGPLEGCKLIRKDKSSYGFVD
YFDHRSAANSILSLNGRHIFGQPIKVNWAYASGQREDTSGCHYSIFVGDLSSEVTDATLF
AAFSIYPSCSDARVMWDQKSGRSRGFGFVSFRNQQDADNAINQMTGKSLGSRQIRCNWAT
KSTSGNPGDDKQNTEAPFASNSAITVSANSGDAQAPAAAQPKSVTQASGPENNPQFTTVY
IGNLSSDVTQSELHRQFLALGVGIIEDVRIQREKGFGFVRYRTHEEAALAIQLGNGKIIC
GKSIKCSWGSKPTPPGATSSLPSASIPFQGVVAPGLNQTYTAADLLAYRQLNMSQAGAGQ
PLLPLSAQQGMGLGLGHGPMGMVGAASNQSIYDNFQAGAGVPAAAAAAAAAAMRQQLMYY
Q
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtacgctgtatcgcagccccagcttcagcagcaaggagttgcagggggggcagttggg
acggcagatcagcaactgcaattgagattgaagcaacaacagctcatgcagcaggccatg
cttcagcaacagcaggggctttatcatcctggtcttttgcaacccatctctcagattgag
ccaattccaagtggaaatctgccacccgggtttgattcaagttcatgccgcagtgtttat
gtgggtaacatacatgtgaatgtcacagaaagtctcctggcagaggtttttggcagtatt
ggtccacttgaaggatgcaagctcatcagaaaggataagtcatcttacgggtttgtagac
tactttgatcatagatcagctgcaaattccattttaagccttaatggaaggcacatattt
ggtcagccaattaaggtcaactgggcctatgcaagtgggcaaagagaagacacgtcaggt
tgtcattacagcatttttgttggggatctcagttcagaggttacagatgctacacttttt
gctgccttctctatatacccaagttgttcagatgctagggtcatgtgggatcaaaagtct
ggaagatcaaggggatttggttttgtttccttcagaaatcagcaggatgctgataatgca
attaatcagatgactggaaaatcccttggcagtcggcagattcgttgtaattgggccacc
aaatcaacctctggaaacccgggggatgacaaacagaacactgaagcaccatttgcttca
aattctgcaatcactgtttctgctaattctggtgatgcacaagccccagcagctgctcag
ccaaaaagtgtcactcaagcctctggacctgaaaacaatcctcaatttaccacagtttac
attggcaacctttccagtgatgtcacccaatctgaactacataggcagttccttgcattg
ggtgtgggtattatagaggatgttcgcattcaaagagaaaaaggttttggatttgtgcgg
tatcgtactcatgaagaagctgctttggctattcagctgggtaatggaaaaattatctgc
ggaaaatcaatcaagtgttcttggggtagcaaacccactcctccaggagccacatccagt
cttccttctgcatcaataccttttcaaggtgtggttgctccagggctcaatcaaacctat
acagctgctgatcttcttgcttacaggcaattgaacatgagtcaggcaggagcagggcag
cctttattgccactctcggctcagcaaggaatgggactgggtctgggacatgggcctatg
ggaatggtcggtgctgcaagcaatcaaagcatttatgataacttccaagctggagctgga
gtaccagctgcagctgcggctgctgccgcagctgccatgaggcaacaacttatgtattat
cagtaa
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