Cryptomeria japonica (Japanese cedar): 131074286
Help
Entry
131074286 CDS
T10556
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjf04131
]
131074286
Membrane trafficking [BR:
cjf04131
]
Protein recycling
Others
EARP complex
131074286
Endosome - Golgi transport
Tethering complex
GARP complex
131074286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
COG4_N
COG7
Vps54_N
XhlA
Motif
Other DBs
NCBI-GeneID:
131074286
NCBI-ProteinID:
XP_057866854
LinkDB
All DBs
Position
7:complement(833600166..833816692)
Genome browser
AA seq
822 aa
AA seq
DB search
MMDKSNTLEYINQIFPTESSLSGVEPMMQKIRNEIRHVDAEILVAVRQQSNSGTKAKHDL
ALATQAIKELMHKIREIKMKAEQSEAMVQEICRDIKKLDFAKKHITTTITALHRLAMLVS
AVEQLQEMATKRQYKEAAGQLEAVNQLCSHFEAYRDNPKITELREKFKNIKQILKSHVFS
DFSSLGTARLKEDSNLMQQLADACLVVDAFEPSVREELIRTVCNKELTAYQQIFEGTEVA
KLDKAERRYAWIKRQLRANEEIWQLFPHSWRVPYLLCIQFCKVTRSQLTDILDGMKEKPD
VGTLLQALQRTLEFEEELAERFGGAPALGKDGESDTEELEDGLDSDKQTASEIRKKYEKQ
RAAQAGTETEPNRGSETAKESPTAGFGFNFRGIISSCFEPHLIIYVELEEKTLMENLEKL
VQEETWEAEEGSQTNILSSSTQVFLMIKRSLKRCSALTKSQTLFNLFKVFQRILRAYAGK
LSAKLPKGMTGIVATATGTDQIKISDKDERVICYIVNTAEYCHETAGQLAENIAKIIDVQ
FADKVDMSEEQDEFSAVITRALMTLVHGLETKLEIELATMTRVPWAALESVGDQSGYVNG
ISTILSSSVPVLGGLLSPVYFQFFLDKLAASLAPRFHLNIYKCKHISETGAQQMLLDTHA
VKTILLEVPSIGGQSAASPGYTKFVGREMGKAEALLKVILSPMESVADTYRALLPEGTAA
DFQRILDLKGLKKVEQQNLLDDFSRHSSGINIPQTSVVPAVPSSPSPTAPSIIGAVANHE
DVLTRAAALGRGAATTGFKRFLALTEAAKDKKEGPFRKLFNT
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgatggataagtctaatactttggagtatataaatcaaatttttcctacagaatcatct
ttatcaggtgtagagcctatgatgcaaaagatccggaatgagatccgtcatgtggatgca
gaaatacttgtggcggttcgccaacagagcaattcaggaactaaagctaaacatgacctt
gcgcttgcaactcaagctatcaaggaactaatgcacaagatacgagaaatcaaaatgaag
gcagaacaaagtgaagccatggtccaggaaatatgtcgagacataaaaaagcttgacttt
gcaaagaagcatattacaacaactatcactgctcttcatcgcctcgcgatgctagtttca
gctgttgaacaactccaagaaatggcaaccaagcgtcaatataaagaggctgctggacaa
cttgaggctgtcaatcaattgtgtagccattttgaagcctacagggataacccaaagata
actgagctgagagagaagttcaagaatataaaacagatattgaaatcacatgtattttcg
gacttctcaagcttggggacagcaaggctgaaggaagatagtaatttgatgcaacaattg
gctgatgcttgcttggttgttgatgcttttgaaccttctgtgagggaggaactgatacga
actgtgtgcaataaggagcttacagcatatcaacaaatatttgaagggacagaagtggca
aaattggacaaggcagagcgtcgctatgcttggattaagcgtcaactccgagcgaatgaa
gagatttggcagctctttccccattcttggcgggttccctatttgctgtgtatccagttt
tgtaaagtaacgaggtcacaacttactgacatacttgatggcatgaaagagaagccagac
gtcggaacattgttgcaggcattgcaaagaacgctagaatttgaggaagagttagcagaa
aggtttggaggggctcctgctcttggtaaggatggagaaagtgacacagaagagttggaa
gatggtttggacagtgacaagcaaactgcatcagagattaggaagaagtatgagaagcag
cgtgcagctcaagctgggactgaaacagaacctaatcgagggagtgaaacagccaaagaa
tcacctactgctggatttgggttcaattttcgaggaataatttcatcttgctttgaacca
cacttaatcatttatgttgaactggaggagaagactctgatggaaaatctagaaaaactt
gtccaggaggagacatgggaggcagaggagggcagtcagactaatattctgtcaagcagc
acacaggtttttttgatgataaagagaagtttaaagcggtgcagtgctctaacgaagagc
caaacgttgtttaatttattcaaggtctttcaaagaatacttcgagcatatgcagggaag
ctttctgccaagttacctaagggaatgactgggattgttgcaactgccactggtactgat
caaataaagatttcagacaaggatgagagggtgatatgctacatagttaatacggctgaa
tactgtcatgaaacagcaggacaattggctgaaaatattgcaaagattattgatgttcaa
tttgcagataaggtggatatgtcagaagagcaggatgagttctcagcggtcataaccaga
gcattgatgacattagtgcatggattagaaacaaaacttgaaattgaattggccacaatg
acacgagttccttgggcagctcttgagagtgtgggtgatcaatcaggatatgtaaatggt
atcagtacaattttgtctagcagtgtccctgttcttggagggctcctatctcctgtttat
tttcaattttttcttgataagcttgcagcatcactggcccctcggtttcatcttaacatt
tacaaatgtaaacatatatcggagactggcgcacagcagatgttactcgacacacatgca
gtgaaaaccattcttctagaagtcccttcaataggaggacagagtgctgcatcccctgga
tatacaaaatttgttggtcgtgagatgggtaaagctgaggcacttttaaaggtaattcta
tctcccatggagtctgttgcagacacgtaccgagctctccttccagaaggaacagctgca
gatttccaaaggattcttgatctcaagggcttgaagaaagttgagcagcagaatctgtta
gatgattttagtaggcatagcagtggtatcaatatcccacaaacttcagttgtacctgca
gtaccatcttctccatctcctactgcaccttcaattataggtgcagtcgcaaatcatgaa
gatgtgctcacacgtgctgcagctctgggaaggggtgcagccaccaccggtttcaaaaga
ttcttagctttgactgaagcagctaaagataaaaaggaaggtcccttccgcaagctcttt
aacacttag
DBGET
integrated database retrieval system
