Cryptomeria japonica (Japanese cedar): 131859762
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Entry
131859762 CDS
T10556
Name
(RefSeq) vacuolar protein-sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
131859762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjf04131
]
131859762
Membrane trafficking [BR:
cjf04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
131859762
Hops complex
131859762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS11_N
PEP5_VPS11_N
TPR_PEP5_VPS11
Clathrin
VPS11_C
Beta-prop_WDR36-Utp21_1st
TPR_Vps41
zf-C3H2C3
zf_RING_Vps8_fungal
zf-RING_5
zf-C3HC4_2
GlnD_UR_UTase
zf-RING_6
Beta-prop_WDR3_1st
zf-RING_2
UTP15_C
ANAPC4_WD40
zf-rbx1
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
131859762
NCBI-ProteinID:
XP_059069782
LinkDB
All DBs
Position
11:complement(184404010..184419873)
Genome browser
AA seq
952 aa
AA seq
DB search
MYQWRKFQFFEEKASGSSVAEELKENVECCSSGRGRMVVGSGDGMVHVLDRGLKINFSFQ
AHTTSVHFIQQLKQRNMLVTVGEDEATSPQLSAMSLKFFDMDKMEPEGSSTTGPTCIQIV
RIFTSQFPEAKITSFLVFEEAPPILMLSIGLETGHIYCIRGDVARERIVRTKLQVDASPV
TGLGFRADGSALQLFVVTTTSVSLFDMHNQPPRMHVLDQIGCEGNCVTMSDNQELVIGRT
EAIYFYEVDGRGPCWAFEGVKQLLGWFRGYLLSVIADQRTNRSIFNIYDLKNRLIAYSLP
VEEVSHMLCEWGNIILLTSDHKVLCIGEKDMEGKLDMLYKKNLYTIAINLVQSQQADAAA
TAEVLRKYGDHLYGKQDYDEAMAQYIRTIGQLEPSYVIQKFLDAQRIYNLTSYLEKLHEK
GLASKDHTTLLLNCYTKLKDVAKLDEFIKGEGEHRFDVETAVKVCRAAGYHEHAMYVAKK
AGKHEWYLKILLEDLGSYDEALEYISSLESFQAAVTVKEYGKILVEHKPDETIAILMKLC
SGDDESVSNDSSVNLLPGKCPSPIDFVNVFIDQPLYLMTFLEKYISKVKNSAVHVEIHNT
LLELYLSDDLSSSSLSKSNVQGVETSGQRSNRNVMSLSNIGNKGKGVMENGQARMGTDER
TGRLNKGLALLKSAWPSHEDHPSYDVDLAVVLCEMHQFKQGRLFLYEKMKLYKEVISCYM
QDSDHEGLIACCKRLGDSSRGGDPSLWEDVLKYFGELGEDCSKEVKEVLVYIERDDLLPP
IIVLQILAKNPCLTLSVVKDYVARKLEQESKLVEEDRKSIDKYQEETAAMRKEVQELRTN
ARIFQLSKCTGCTFTLDLPAVHFMCMHSFHQRCLGDNEKECPVCAPQNKTLLEMKRSLEQ
NAKDHDRFFQLVRNSNDGFSVIANYFGRGVMNKTKDGNSSSSRSNTSPFNGY
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgtatcagtggaggaaatttcagttttttgaagagaaggcatcaggatcttctgttgca
gaggagttgaaggaaaatgtggagtgctgttcgagtggccgcgggcgcatggtggttgga
tcgggtgatggaatggtacacgtgctcgaccgaggtttaaagatcaatttcagctttcag
gctcacactacgagtgttcattttattcagcagcttaagcaacggaatatgttggtaact
gttggtgaggatgaagcaacatcacctcaactgtcagcgatgtcacttaagttttttgat
atggataagatggagccagaggggtcaagtaccacaggtcccacttgcatacaaatagtg
cgaattttcaccagccaatttcctgaagcaaagattacatcatttttagtttttgaagag
gcgcctccaatattaatgctctctataggactagaaacaggtcatatctattgtataaga
ggagatgttgctcgggaacgcattgtgcgtacaaagcttcaggttgatgcatctcctgtg
acaggactaggatttcgagctgatggttcagctcttcagctttttgttgtgacaacaaca
tcagtgagcctctttgacatgcataaccagcctcctaggatgcatgttttagatcagatt
gggtgtgaaggtaattgtgtgacgatgagtgataaccaggaattggttattgggaggact
gaggccatatatttttatgaagtagatgggcgaggtccttgctgggcctttgagggggtc
aagcagttacttggatggtttcgaggatatttgttgtctgtcattgcagaccagagaaca
aatcgcagcattttcaacatatatgacctgaaaaatcgtctgattgcctatagtttacca
gttgaagaagtctcccatatgctttgcgagtggggaaatattatccttctaaccagtgac
cataaagtcttgtgcataggagagaaggacatggaaggtaaactggatatgctttataaa
aagaatttatatactattgcaataaatcttgtccaaagtcaacaagcagatgcagcagcc
acagcagaagtgttgcgaaaatatggagaccacttgtatgggaaacaagactatgatgaa
gccatggcacagtatattcgtactataggccagctagaaccttcttatgtcattcaaaaa
tttcttgatgcccaacgcatttataatcttactagttacttggaaaaactacatgagaaa
ggtttggcctctaaggaccatacaacccttcttctgaattgttataccaaacttaaggat
gtagcaaagttggatgagttcattaaaggtgaaggtgagcaccgatttgatgtggaaaca
gctgtaaaagtttgtcgagcagcaggttatcatgaacatgcaatgtatgttgcaaaaaaa
gctgggaagcatgaatggtatttaaagatactactagaggatcttggcagttatgatgag
gctctagagtacatctctagccttgaatcatttcaagctgcagttacagtgaaggaatat
ggaaagattcttgttgagcataagccagatgagactattgctatccttatgaagctttgt
tctggtgatgatgaatcggtttccaatgactcttctgttaaccttcttcctggcaaatgt
ccttcaccaattgattttgtaaatgtttttattgaccaacctttatatctcatgactttc
ctagaaaaatacatcagtaaagttaagaattcagctgttcatgttgaaattcataacaca
cttttggagctatacttgtctgatgatctttctagctcatcattatccaaatctaacgtc
cagggtgtggaaacttctggacaacgctcaaacaggaatgttatgtcattgtcaaacatt
gggaataaagggaaaggagtaatggaaaatggacaggcacgcatgggaacagatgagcgt
acaggaagactgaacaaaggattagccttgcttaagagtgcatggccttctcatgaggat
catccaagctatgatgtggatcttgcagttgttctttgtgaaatgcatcaattcaagcaa
gggcggttatttctatatgaaaaaatgaaactgtataaagaagttatttcttgttatatg
caagattcagaccatgaaggtctgattgcttgttgtaaaaggctgggtgattcgagcagg
ggtggagatccatctttgtgggaagatgtactcaagtactttggagagcttggagaagat
tgttcaaaagaagttaaagaagtgctggtgtatattgaaagggatgacctcttgccccca
attattgttttacagattcttgctaaaaacccatgtctcacactttctgttgttaaggat
tatgttgcacgaaagctagaacaagaatctaaacttgtggaagaagatcggaaatcaatt
gacaagtatcaggaagagactgcagctatgaggaaagaggtacaggaactccgtacaaat
gcaaggattttccaattgagcaaatgcactggatgtacatttactcttgatcttccagcg
gttcactttatgtgcatgcattcatttcatcaacgctgtcttggtgacaatgagaaggaa
tgccctgtttgtgctccccagaacaaaacattgcttgaaatgaagaggagcttagaacag
aatgccaaggaccatgatcgatttttccaacttgttcggaattcaaatgatgggttttct
gtaattgctaattactttggtaggggagttatgaacaagacaaaagatggcaattccagc
agcagcagatcaaacacaagcccatttaatggctattga
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