Cryptomeria japonica (Japanese cedar): 131874360
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Entry
131874360 CDS
T10556
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf00040
Pentose and glucuronate interconversions
cjf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131874360
Enzymes [BR:
cjf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131874360
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
131874360
NCBI-ProteinID:
XP_059073680
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All DBs
Position
3:complement(759686025..759688095)
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AA seq
447 aa
AA seq
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MASRQALQPLFLLLAVFFIKLVMVESIRTPFNMTKAENSDKYHVEKPELVVQMVYYKCSI
YSYAVPRRFLHCNFYNTILVTVVELLCRSLNNSKRKLSSCETGNPIDDCWRCDPNWVNNR
KRLADCAIGFGKNAIGGKNGRFYIVTDPNDDDPVNPRPGTLRHAVIQTEPLWIIFQKDMV
IHLKEELIMNSYKTIDGRGANVHIANGACITIQYVTNIIIHGVHIHDCKPAGNTNVRSSP
THYGFRTKSDGDGISIFGSSAIWVDHCSLSSCADGLIDAIMGSTAITISNSFFTHHDKVM
LLGHSDAYTEDVKMQVTVAFNHFGQGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANP
TINSQGNRFLAPDYRFHKEVTKHQDSTEGNWRSVGDLMLNGAFFTASGAKESSSYAKASS
MAARPSSIVGSITASSGVLTCRKGSSC
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcagacaagccttacagccattgtttcttcttcttgctgtctttttcatcaag
ttagtaatggtggaatcaataagaacccccttcaatatgactaaggctgagaatagtgat
aaatatcatgttgagaagccggagcttgtagttcaaatggtttattataaatgttctatt
tattcttatgctgttcctcgacgttttcttcactgtaatttctataatactattctcgta
actgtagttgaactattgtgcaggagtttaaataattcgaaaagaaagctgagctcgtgc
gaaacggggaaccccatcgatgactgttggcgttgtgatcctaactgggttaacaaccga
aagagactggctgattgtgccatcggatttggcaaaaacgccattggaggtaagaatggc
agattttatatagttacagatccaaatgacgatgacccggtcaatcctcgacctggcact
ctgcggcacgctgttattcaaaccgaacctctctggattattttccaaaaagatatggtt
attcacctcaaggaggagcttatcatgaacagttataagactattgatggtagaggtgcc
aatgttcatatagcaaatggagcttgcattacaattcagtatgtgaccaatattatcatt
catggagttcatatccacgactgtaaacctgcgggaaacacaaatgttaggagctccccg
acacattatgggtttagaaccaagagtgatggagatgggatttccatctttggatcaagc
gcaatttgggttgaccactgttcattgtcaagttgcgcagatggattgatcgacgccatc
atgggttccactgctataaccatttcaaacagctttttcactcaccatgacaaggtgatg
ctcctaggacacagcgacgcctacaccgaggacgtcaaaatgcaagtaacagttgctttc
aaccactttggacaagggcttgttcaacgtatgcccagatgtcgacatggatactttcat
gtggtgaacaatgattacacccactgggaaatgtatgcaatcgggggaagtgcaaacccc
accattaacagccaaggcaacagattccttgctcctgattatcgattccacaaggaggtt
acaaagcaccaagattcaacagaaggtaactggagatcagtgggagatcttatgttaaat
ggggcattcttcacagcatcaggggctaaagaatcctcaagctatgccaaagcttcgagt
atggcggcaagaccttcctctattgtgggctctatcactgcaagttcgggtgttctcacc
tgcagaaaaggttccagctgttag
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