Campylobacter jejuni subsp. jejuni 00-1597: PJ17_06400
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Entry
PJ17_06400 CDS
T03791
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cjl
Campylobacter jejuni subsp. jejuni 00-1597
Pathway
cjl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cjl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PJ17_06400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjl03019
]
PJ17_06400
03016 Transfer RNA biogenesis [BR:
cjl03016
]
PJ17_06400
Enzymes [BR:
cjl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PJ17_06400
Messenger RNA biogenesis [BR:
cjl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PJ17_06400
Transfer RNA biogenesis [BR:
cjl03016
]
Prokaryotic type
tRNA degradation factors
PJ17_06400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
LYRM2-like
DUF2501
CTD9
DUF6599
S1_2
DUF2459
Motif
Other DBs
NCBI-ProteinID:
AJK71909
LinkDB
All DBs
Position
1244887..1247046
Genome browser
AA seq
719 aa
AA seq
DB search
MQYSIEINKNTEIFNIDKVAKQAAGAVLMRQGKSVVLATVAREEKQVEEDFLPLTVQYIE
KAYAAGKIPGGYVKRETKPSDAETLTARIIDRSLRPLFPKGYAYPTQIVVMVLSADPKVD
LQVMSLNAASVALYLSDIPMKAPVCGVRIGKIDGNFILNPNNEELQNSTLDLYVAGVKDE
LLMIEMRALPDQKENEIFIEAPYADVLTQTTSQNMNELSEDEILEALNLAQKAILNGSNA
YEEAFSKHEKNSQIELKNEIEYPEILAFIENNFQKQIKEAINQMAKSERASELNKIAKEI
SNLEIAKEWSEESVLNTLAKVKRKLIREQILNEGKRADGRSLNEVRPINIETNILPNAHG
SCLFTRGQTQALVVATLGGENDAQMIDLLTEKNPISERFMVNYNFPGFSVGEASPIKAPG
RRELGHGNLAKRALYPSVDENYPYVIRLVSEILESNGSSSMATVCGGSLALKAAGVPSLK
LVAGVAMGLIFEDNKYAVLTDIMGLEDHDGDMDFKVAGSKDGITALQMDIKLGGIDQEIL
KQALYQAKEGRIHILNIMEEAAKEIIVNEEVLPKLELFSVDPSKIVDIIGQAGKTIKEIV
EKFGVSIDLDREKGEVKIAGSQNEQIKAAKDYIINITSSQKGTKKGSKDKDISGFELGQE
FQGIVKKIAPFGAFVELKNGVDGLLHSSKSKHLNLSENQSLKVKISEIKNGKISVDLCE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgcaatacagcatagaaattaacaaaaatacagaaatatttaatatagacaaagtcgcc
aaacaagctgccggtgctgttttaatgagacaaggcaaaagcgttgttctagctacagtt
gcaagagaagaaaaacaagttgaagaagattttttacctctaaccgtccaatacatcgaa
aaagcttatgccgcaggaaaaatccctggtggttatgtcaaaagagaaaccaagccaagc
gatgcagaaaccttaacagcacgcattattgatagaagcttacgccctctttttccaaaa
ggctatgcttatccgactcaaatcgttgtgatggttctctcagctgatcctaaagtagat
ttgcaagtaatgagcttaaatgccgcaagcgtggcactttatcttagtgatatacctatg
aaagctccagtatgtggtgtgcgtataggaaagatagatggaaatttcatactcaatcca
aacaatgaagagcttcaaaatagcaccctagatctctatgtagcaggtgtaaaagatgag
cttttgatgatagaaatgagagccttacctgatcaaaaagaaaatgaaatctttatcgaa
gctccttatgctgatgttttaactcaaaccacttcacaaaatatgaatgaacttagcgaa
gatgaaattttagaagctctaaatttagctcaaaaagctatattaaatggttcaaatgct
tatgaagaagcctttagcaaacacgaaaaaaattctcaaatcgaactaaaaaatgagatt
gaatatcctgaaattttagcttttatagaaaataatttccaaaaacaaatcaaagaagcc
atcaaccaaatggcaaaaagcgaaagagcaagcgaactaaataaaatcgctaaagaaatt
tcaaatcttgaaatcgctaaagagtggagcgaagaaagtgtcttaaataccttagctaaa
gtcaaacgcaaacttattcgtgagcaaattttaaatgaaggcaaaagagctgatggtaga
agtttaaacgaagtgcgtcctattaatatagaaaccaacatcttaccaaacgctcatggt
tcttgtcttttcactcgtggacaaactcaagccctagtggttgcaaccttaggcggagaa
aacgatgctcaaatgatagacttgcttacagaaaaaaatcctataagcgaacgctttatg
gtaaattataattttccaggtttttcagtaggcgaagcaagtcctatcaaagctccagga
agaagagaactaggacatggaaatttagccaaaagagcactttatccaagtgtggatgaa
aactatccttatgtaatccgcttagtcagtgaaattttagaaagcaatggctcaagttct
atggcaacggtttgcggcggatctttagccttaaaagcagcaggagtgccaagcttaaaa
cttgttgcaggagtagccatggggcttatctttgaagataacaagtatgctgttttaaca
gatatcatgggacttgaagatcatgatggggatatggactttaaagtagcaggaagcaaa
gacggcattacggctcttcaaatggatataaaactaggtggaatcgatcaagaaatacta
aaacaagctttataccaagccaaagaaggaagaattcacattctaaatatcatggaagaa
gccgccaaagaaatcatagtcaatgaagaagttttacctaaacttgagctttttagcgtt
gatccttcaaaaatcgttgatatcataggacaagccggaaaaaccatcaaagaaatcgta
gaaaaatttggcgtttctatagacttagatcgcgaaaaaggtgaagtaaaaatagcaggt
agtcaaaacgaacaaatcaaagccgcaaaagactacatcataaacatcacaagctctcaa
aaaggaactaaaaaaggctctaaagacaaagatatatcaggctttgaacttgggcaagaa
tttcaaggtattgttaaaaaaatcgctccttttggagcctttgtggaacttaaaaatggt
gttgatggtttattgcatagttcaaaaagcaagcatcttaatttaagcgaaaaccaaagc
ttaaaagttaaaatcagcgaaattaaaaacggaaaaatttctgtggatttgtgtgagtga
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