Coturnix japonica (Japanese quail): 107306051
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Entry
107306051 CDS
T04297
Symbol
TNPO1
Name
(RefSeq) transportin-1 isoform X1
KO
K18752
transportin-1
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107306051 (TNPO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjo03019
]
107306051 (TNPO1)
03009 Ribosome biogenesis [BR:
cjo03009
]
107306051 (TNPO1)
Messenger RNA biogenesis [BR:
cjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107306051 (TNPO1)
Ribosome biogenesis [BR:
cjo03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
107306051 (TNPO1)
Pre-60S particles
107306051 (TNPO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IMB1
HEAT_2
Arm
IBN_N
Vac14_Fab1_bd
TOR1L1_N
TPR_IPO5
Cnd1
HEAT_EF3_N
HEAT_MROH2B_C
TPR_DNAAF5
PDS5
Adaptin_N
HEAT_GCN1_C
MMS19_C
CEP104-like_TOG
DNA_pol_phi
Dopey_N
UNC45-central
RTP1_C1
VPS15-like_hel
ARM_ECM29_C
DUF2457
NOA36
ARM_TBCD
HEAT_DAAF5
RRN3
RNA_pol_3_Rpc31
TPR_TTI1_C
Motif
Other DBs
NCBI-GeneID:
107306051
NCBI-ProteinID:
XP_015704322
LinkDB
All DBs
Position
Z:complement(22834757..22904576)
Genome browser
AA seq
900 aa
AA seq
DB search
MEYEWKPDEQGLQQILQLLKESQSPDTTTQRAVQQKLEQLNQYPDFNNYLIFVLTKLKSE
DEPTRSLSGLILKNNVKAHFHNFPNGVTDFIKSECLNNIGDSSPLIRATVGILITTIASK
GELQNWPELLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPLNIMIPKFL
QFFKHSSPKIRSHAVACVNQFIISRTQALMMHIDAFIENLFALATDEEPEVRKNVCRALV
MLLEVRMDRLLPHMISIVEYMLLRTQDQDENVALEACEFWLTLAEQPICKDVLCRHLTKL
IPVLVNGMKYSEIDIILLKGDVEEDEAIPDSEQDIRPRFHRSRTVAQKHEEGDDDDDDDE
DDDDEDDDDDDDENDDDDAISDWNLRKCSAAALDVLANVFRDELLPHILPLLKELLFHPE
WVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVV
SQPPDTYLKPLMTELLQRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAF
SKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIHKWNMLKDEDKDLFPLLECL
SSVATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLHNAQPDQYEAPDKDFMIVALDLLSG
LAEGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFM
PILGTNLNPEFISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIINRPNTPKTLLEN
TAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMITVNPNGVFQ
DFIFFCDAVASWISPKDDLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAAYYGV
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atggagtacgagtggaagcccgacgagcaggggctccagcagatcctgcagctgctgaag
gaatcgcagtccccggacaccaccacgcagagagccgtgcaacaaaaactagaacaactt
aatcagtatccggatttcaacaactacctgatatttgttcttacgaagttgaagtctgaa
gatgaaccaacacgttccttgagtggtctcatcttgaagaataatgtaaaagcacacttt
cacaactttccaaatggggtaactgacttcatcaaaagtgaatgtctgaacaacattggc
gattcctctcccttaattagagctactgtaggtattctgataacaaccattgcttcaaaa
ggagaattacagaattggcctgaacttttaccaaagctttgcagcctcttagattcagag
gactacaatacttgtgagggtgcgtttggcgctcttcagaagatatgtgaagattctgct
gaaatattagatagtgatgtattggaccgaccactcaatatcatgatacctaaattctta
cagttcttcaagcacagcagtccaaaaataagatctcacgctgttgcatgtgtcaatcaa
tttatcatcagtagaactcaagctcttatgatgcacatagatgcttttattgagaatctt
tttgcactggctactgatgaggaacctgaagtacgcaaaaatgtttgccgtgctctggta
atgttgctggaagttcgaatggatcgccttcttcctcatatgattagtatagttgagtac
atgcttctaaggacccaggaccaagatgaaaatgtggctttggaggcctgtgaattttgg
ctgactttggctgagcaacccatttgtaaggatgttttatgtcggcatcttactaagctg
atacctgtgctggtgaatggtatgaagtattcggagatagatattattttgctgaagggg
gatgttgaagaagatgaagcgattccagatagtgaacaggacataagacctcgttttcat
cgttcgcgaacagtagctcaaaaacatgaagaaggtgatgatgatgatgatgatgatgaa
gatgatgatgatgaagatgatgatgatgatgatgatgaaaatgatgatgatgatgctatt
tctgactggaatttaaggaaatgttctgctgctgctctagacgttttggccaatgtattt
cgtgatgaacttctgccacacatcttgccccttttgaaggaattgctcttccatcccgaa
tgggtagttaaggaatcaggtatccttgttcttggagcaattgctgaaggctgcatgcag
ggtatgattccatatcttcctgagctgatccctcaccttattcagtgcctctctgacaaa
aaggctcttgtgcgctccattacatgctggactcttagtcgctatgcacactgggtagtt
agtcaacccccagacacatacttgaagccattaatgactgagttgctacagcgtatcctg
gatagcaacaagagagtacaagaagctgcctgcagtgcctttgctaccctagaagaggag
gcttgtacagagcttgttccttatcttgcatatatacttgacactttggtcttcgcattt
agtaaataccagcataaaaacctacttattctttatgatgctataggaaccctagcagat
tctgtaggccatcatctaaataaaccggaatatattcagatgctaatgcccccattaatc
cacaagtggaacatgttgaaggatgaagataaagatctctttcctttattagagtgcctg
tcgtcagttgctactgccttgcaatctggctttcttccatactgtgaacctgtgtaccag
cgttgtgtaaatctagtgcaaaagacccttgcacaagccatgttgcacaatgctcaacca
gaccaatatgaggctccagataaggacttcatgattgtggctcttgatttactcagtggt
ttagctgaaggtcttggtggcaacattgagcagctggtggctcggagcaatatcctgaca
ctgatgtaccagtgcatgcaggataaaatgcctgaagtacgacagagttcttttgcgctg
ttaggtgatctgacaaaggcatgttttcagcatgttaagccttgcattgctgatttcatg
cccattttgggaaccaacctaaaccctgaattcatttctgtgtgtaacaatgctacctgg
gcaattggagaaatctccattcagatgggtatagagatgcagccttatattccaatggtg
ttgcaccagcttgtagaaataattaacagacccaacacaccaaagacattgttagagaac
acagcaataacaattggtcgtcttggttacgtttgtcctcaagaggtggcccccatgcta
cagcagtttataagaccctggtgcacctctctccggaacataagagacaatgaggaaaag
gactcggcattccgtgggatatgtaccatgattacagtcaaccccaatggcgtattccaa
gactttatttttttttgtgatgctgttgcatcgtggattagcccaaaagatgatctccga
gacatgttctgtaagattcttcatgggtttaaaaatcaagttggggatgagaattggagg
cgtttctcagaccagtttcctcttcccttaaaagagcgccttgcagcttactatggagtt
taa
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