Coturnix japonica (Japanese quail): 107312063
Help
Entry
107312063 CDS
T04297
Symbol
COL9A1
Name
(RefSeq) collagen alpha-1(IX) chain isoform X1
KO
K08131
collagen type IX alpha
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo04510
Focal adhesion
cjo04512
ECM-receptor interaction
cjo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107312063 (COL9A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107312063 (COL9A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107312063 (COL9A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cjo00535
]
107312063 (COL9A1)
Proteoglycans [BR:
cjo00535
]
Extracellular matrix (ECM) proteoglycans
Others
107312063 (COL9A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
107312063
NCBI-ProteinID:
XP_015714610
UniProt:
A0A8C2Y8H9
LinkDB
All DBs
Position
3:75564778..75625226
Genome browser
AA seq
920 aa
AA seq
DB search
MKSNWKITAFLYMCSFLGSFISATIQQQSRLPVILGARQRTDLCPTIRIGQDDLPGFDLI
SQFQIEKAASQGIVQRIVGSTALQVAYKLGPNVDFRLPTSAIYSNGLPDEYSFLTTFRMT
GATLQKYWTIWQIQDSSGKEQVGVNLNGPMKSVEFSYKGVDGNLQTASFLHLPFLFDSQW
HKLMISVEATSVTLFIDCIKVESLNIKPKGKISVDGFAVLGRLKNNPQISVPFEVQWMLI
HCDPLRPQREGCGELPARISQTVIERGLPGPPGPPGPPGPPGVPGIDGIDGERGPNGPPG
PPGPDGDDGKAGSPGLPGEPGADGLTGPDGSPGATGPKGQKGEPGPPGARGLPGKGLLGP
PGPAGAAGLPGEVGRAGPPGDPGKRGPPGPPGPPGPRGTIGLQDGDPLCPNACPPGRPGH
AGLMGMKGQKGSKGESGEPGKQGYKGEEGDQGPIGEVGAQGPPGILGVRGITGITGPKGN
KGARGLDGDPGPQGLPGAPGDQGQRGPLGEEGPKGERGPQGTRGINGLPGPKGESGLPGV
DGREGIPGMPGAKGEPGKPGAPGDTGPQGLPGLPGSPGMKGIPGPKGNRGPPGVPGLMGN
SGKPGEQGPEGEAGPTGPRGPPGSRGEPGPAGPPGLPGKWGPQGDIGLPGLPGPPGLPGG
KGDRGSAGEPGPKGEQGAPGSEGDAGEKGDLGDMGLPGAKGSVGNPGDPGSRGPEGSRGL
PGMEGPRGAPGPRGLQGEQGAPGLPGSQGPAGKEPTDQHIKQVCMRVMQEQLSQLAASLR
RPEFGAPGLPGRPGPPGAPGPPGENGFPGQLGPRGLPGLKGPPGEIGRKGPKGEAGERGE
RGFPGRGEKGLPGPRGLPGEPGKPSYGREGRDGVRGPPGVAGQPGIPGPPGPPGPPGYCE
PSSCRMQAGQRAAGKNVKGP
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcaactggaaaattacagctttcttatatatgtgtagttttctggggtctttc
atctcggctaccatccagcaacaatcaagattgccagtcattctgggtgctcgtcagaga
actgatctctgcccaacaatcaggattggccaagatgacttaccaggctttgacctgatt
tctcagttccagatagaaaaagctgcttctcaaggaattgtccagagaatagtgggttcc
actgctctacaagtggcttataaattgggacccaatgtagacttcaggcttccaaccagc
gcaatatattccaatggattgcctgatgaatattcctttcttactacttttcggatgact
ggagccacacttcagaaatactggactatatggcagattcaggattcttcaggaaaagaa
caagttggagtgaatctcaatggtccaatgaaaagtgttgagttttcttataaaggagtg
gatggaaatctccagactgcatcatttttacatttgcctttcttgtttgattcccaatgg
cacaagcttatgataagtgtggaagcaaccagtgttacactttttattgactgtataaaa
gtagaatccctaaacataaaaccaaaggggaaaatcagtgttgatggcttcgctgtgctt
ggaagactcaaaaataatcctcaaatttcagttccgtttgaagtccagtggatgctgatt
cactgcgatcccctgcggccccagagagaaggctgtggtgagctcccagcccggataagc
cagacagtgattgagagaggtctccctggtccaccaggccccccaggtccaccagggcca
ccaggagttcctggcattgatggaatcgatggagagagaggacctaatggccccccaggt
ccaccgggtccagatggggatgatggaaaagcgggatccccgggcctgcctggagagcca
ggagctgatgggttaacaggccctgatggatcaccaggtgccacaggaccaaaaggacag
aagggtgagccaggacctccaggtgctcgtggacttccgggcaagggacttcttggacca
cctggtccagctggtgctgcaggacttcccggtgaagtgggccgtgctggccctcctgga
gatccagggaaaagggggccaccaggaccaccaggaccaccaggccctcgaggaacaatt
ggtctgcaagatggtgacccattgtgtcccaatgcttgtccacctggacgcccaggacat
gctggcctaatgggaatgaagggacagaaaggctcaaaaggagaatctggtgaaccagga
aaacaaggttataagggtgaagaaggagatcaaggacccatcggtgaagttggagctcaa
ggccctccaggcattctaggtgtcagaggtataactggaataacaggacctaaaggtaac
aaaggagctcgtggccttgatggtgatcctggtccccaaggtcttcctggtgcacctggg
gatcaaggacagagaggtccactgggagaagagggtccaaagggagaaagaggtcctcaa
gggacaagaggaataaatggtctccctggacctaaaggagagtctggcttgccaggagtt
gatggccgggaaggtatccctggaatgcccggagcaaagggtgaaccaggaaaacctggt
gctcctggtgatacaggacctcagggattgccaggtttaccaggctctccaggtatgaaa
gggattcctggcccgaagggtaatagaggtcctcctggagtgccaggtttgatgggaaat
tctggcaaaccgggtgaacagggaccggagggggaagcaggtccaacaggacccaggggg
ccaccgggtagcagaggagagccaggtcctgcaggccctccaggtttaccagggaaatgg
ggtccccagggtgacattggacttcctggactaccaggtcctccaggcctacctggtggt
aagggtgaccggggttcagcgggtgaaccaggacctaagggtgaacaaggtgcacctgga
tcagaaggagatgcaggagaaaagggtgacttaggtgatatgggattaccgggtgcaaag
ggatctgttggtaatcctggagaccctggttcccgtgggccagagggaagtcggggactg
cctggcatggaagggccacggggtgcacccggaccacgaggcttgcagggtgaacagggt
gctccaggtctgcctggcagccaaggtccagctggaaaagaaccaactgatcagcacatt
aagcaggtctgcatgagagtcatgcaagaacaactctctcagctggcagccagtcttagg
cggccagaatttggtgctccaggtcttcctggccgacctgggcctccaggtgctccaggg
cctcctggagaaaatggtttcccaggacaacttggaccccgtggcttgcctggccttaaa
ggtcctcctggtgagattggtcgtaaaggtcctaaaggtgaagcaggagaaaggggagaa
agaggatttccaggcagaggagagaaaggtctcccgggaccgaggggtcttccaggtgaa
ccaggcaaacccagctatggcagggaaggccgtgatggtgtacgaggtccccctggggtg
gctggtcagcctgggattcctggtcctcctggccctcccggccctcctgggtactgtgag
ccatcgtcttgccgaatgcaggctggacagagagctgctggtaagaacgtgaaagggcca
tga
DBGET
integrated database retrieval system
