KEGG   Coturnix japonica (Japanese quail): 107321467
Entry
107321467         CDS       T04297                                 
Symbol
SF3A1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
cjo  Coturnix japonica (Japanese quail)
Pathway
cjo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cjo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107321467 (SF3A1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cjo03041]
    107321467 (SF3A1)
Spliceosome [BR:cjo03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    107321467 (SF3A1)
 Complex B
    107321467 (SF3A1)
 Complex C
   U2 SnRNP specific factors
    107321467 (SF3A1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 107321467
NCBI-ProteinID: XP_015733882
UniProt: A0A8C2TSY7
LinkDB
Position
15:9657506..9670323
AA seq 790 aa
MPAGPVQAGPPAQPAPPAESKPPEEEPKEEAAPAKPVVGIIYPPPEVRNIVDKTASFVAR
NGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQQT
AQQQLPQKVQAQVIQETVVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLT
QLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLIKLKKEAENPKEVLDQV
YYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTTPEE
LGARILIQERYEKFGESEEVEMEVESDEEDEKQEKTDEPPTQLDQDTQVQDMDEGSDDED
ESQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKIPAS
KMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVEETA
IGKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDDSKE
KIGPSKPNEMPQPPPPSSASNPPPSAQPITSVPRPPTMPPPVRAAVVSAVPVMPRPPMTS
VVRLPPGSVIATPMPPIIHTPRINVVPMPPSAPPIMSPRPPPMIVPTAFVPAPPVAPVPS
PAPMPPVHPPPPMEDEPVSKKLKSEDSLIPEEEFLRRNKGPVTVKVQVPNMQDKTEWKLN
GQVLVFTLPLSDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMTSGSLIHL
ALKERGGRKK
NT seq 2373 nt   +upstreamnt  +downstreamnt
atgccggctgggcctgtgcaggccgggcctccggcgcagccagcgccgcctgcagagagc
aaaccgccagaagaggagccaaaagaggaagcagcaccagccaaacctgtggtgggaatt
atttatcctcctcccgaggtcaggaatattgttgacaagactgccagcttcgtagccaga
aatggtccagaatttgaagctcgaattcgtcagaatgaaataaataatcctaaattcaat
ttcttgaaccccaatgatccctaccatgcatactaccgacacaaagtcagtgagttcaag
gagggcaaagcacaggagccctcagctgctattcccaaggtcatgcaacagcagcaaact
gctcagcagcagcttccacagaaggttcaggcccaggtgatccaggagacggttgttcca
aaagagccgcctccagagtttgagttcatcgcagatcctccctcaatttctgcctttgat
ttggatgtggtgaagctgacagcgcagttcgtggctcggaatgggaggcagttcctgact
cagctgatgcagaaggaacagaggaactaccagtttgacttccttcgcccgcagcacagt
ctctttaactacttcacaaagctggttgaacagtacacaaagatcttgatcccaccgaaa
ggcttactcatcaagctcaagaaggaggctgaaaatcccaaagaagtcttagatcaggtg
tattacagagtggagtgggcaaagttccaggagcgagagagaaagaaggaagaggaagag
aaggagaaggagcgtgttgcttatgctcagattgattggcatgattttgtggttgtggaa
acagtggactttcagcccaacgagcaagggaatttcccacctcccaccactccagaagag
ctgggagctcgaatcctcatccaggagcgctatgagaagtttggggaaagtgaagaggta
gagatggaggtggagtcagatgaagaagatgaaaaacaagagaaaacagatgagcctcca
acccagctggatcaagacacgcaagtgcaggatatggatgagggttcagatgatgaagat
gaaagtcagaaagttcctcctcctccagaaactccaatgccaccacctcttcctcccaca
ccagatcaggtcattgtgcggaaagattacgatcccaaagcttcaaaaccgttaccgcct
gccccagctccagatgagtatcttgtttcccccatcactggggagaaaatccctgccagt
aaaatgcaagagcacatgcgaattggtctgctggatcctcggtggctggagcagcgcgat
cggtctatccgtgaaaaacagagtgacgacgaggtctatgccccaggtttggatattgaa
agcagcttgaagcagctggcagagcgccgtaccgatatctttggtgtggaagaaactgcc
attggtaagaagattggtgaagaggaaattcagaaaccagaggaaaaggtgacctgggat
ggccactcaggcagcatggcccgcacacaacaggctgctcaagccaatattactcttcaa
gagcaaattgaagctatccataaggccaagggactggtgccagaagatgacagcaaggag
aagattggtcccagcaaacccaatgaaatgccccagccaccccctccttcatcggcatcg
aatcctcctccgagtgctcagcctatcacttctgtgcctcgtccacccacaatgcctcct
cctgttcgtgctgctgttgtttctgctgttcctgtcatgcctcgtcccccgatgacctcc
gtggtccgtttgcctccagggtctgtcatagccacccccatgccaccaataatccacacc
ccacggatcaatgttgtccccatgccgccgtctgctcctcccatcatgagccctcgccca
cctcccatgatagtaccaacggcatttgttccagcacctcccgtggctccagttccttcc
ccagcgccaatgcctcctgttcacccaccaccacctatggaggatgagccagtttcaaag
aaactgaagagcgaggacagcttgattccagaggaggagtttctgcgcaggaacaagggc
ccagtcacagtcaaagtccaggtccccaacatgcaggacaagaccgaatggaagctgaat
ggccaagtgctggtgttcaccctaccgctgtcagaccaggtgtccgttataaaggttaag
atccacgaggccacagggatgccagctgggaaacagaagctgcagtatgagggcatcttc
atcaaggattcaaactccctggcttattacaacatgacaagtggctctctgattcacctg
gcactcaaagaaagaggaggcagaaagaaatag

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