Coturnix japonica (Japanese quail): 107324232
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Entry
107324232 CDS
T04297
Symbol
DDX6
Name
(RefSeq) probable ATP-dependent RNA helicase DDX6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107324232 (DDX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjo03019
]
107324232 (DDX6)
03036 Chromosome and associated proteins [BR:
cjo03036
]
107324232 (DDX6)
Enzymes [BR:
cjo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107324232 (DDX6)
Messenger RNA biogenesis [BR:
cjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107324232 (DDX6)
mRNA degradation factors
5'-3' decay
Decapping complex
107324232 (DDX6)
Chromosome and associated proteins [BR:
cjo03036
]
Eukaryotic type
Gene silencing
piRNA pathway
107324232 (DDX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
107324232
NCBI-ProteinID:
XP_015739548
UniProt:
A0A8C2TLV9
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All DBs
Position
24:complement(4825895..4842963)
Genome browser
AA seq
483 aa
AA seq
DB search
MSTARTENPVIMGLSSQNGQLRGPVKPSGGPGGGGTQTQQQMNQLKNANTINNGTQQQAQ
SMTTTIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPS
PIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQV
SQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVEHV
QMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINL
MEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYS
CFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLH
RIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPVED
EKQ
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggccagaacagagaaccctgttataatgggtctatccagtcagaacgggcag
ttgagaggccctgtgaaacccagcgggggcccaggaggtggaggcacacagactcagcaa
cagatgaaccagctgaaaaatgccaacacaattaacaatggcacccaacagcaagcacag
agcatgaccaccactattaaacctggcgatgactggaagaagactttaaaactccctcca
aaggatttgagaatcaaaacttctgacgtgacctccacaaaaggaaatgagtttgaagat
tactgtttgaaacgggagttgctgatgggaatttttgaaatgggctgggaaaagccatct
cctattcaggaggagagcatccccattgctttgtctggtagggatatcttggctagagcg
aaaaatggaacaggcaagagtggagcctacctcattcccttacttgaacggctagactta
aagaaggacaacatacaagcaatggtgatcgttcccacccgtgaactagccctgcaggtc
agtcaaatctgtatccaagtcagcaaacacatgggaggtgccaaagtgatggcaacaaca
ggaggaaccaatttacgagatgacataatgaggcttgatgatacagtgcatgtggtgata
gctacccctggaagaattctcgatctcatcaagaagggagtagcaaaagttgagcatgtc
cagatgatagtattggatgaggcagataagttgctgtctcaagattttgttcaaataatg
gaagacattattctcacgctacctaaaaacagacagattttgctctactcagccactttc
cctctgagtgtacagaagttcatgaattcccatttgcagaaaccctatgagattaatctg
atggaggagctgaccttgaagggagttacccagtactatgcctatgtaactgagcgtcag
aaggttcactgcctcaatacgctgttttccaggctccagatcaaccagtcgatcattttc
tgcaactcctctcaacgggttgaattgctagccaaaaagatctcccagctgggctattcc
tgcttctatatccatgctaaaatgaggcaggagcatcgcaaccgcgtgttccacgatttc
cgaaatggcttatgccgcaatcttgtttgcactgatctgtttacccgaggtattgatatc
caagctgtgaatgtggtgataaactttgattttccaaagctggcagagacttatctccat
cgtattggcagatcaggtcgctttggacatcttggcctggccatcaacttgatcacctac
gatgatcgattcaacctgaaaagtattgaggagcagctgggaactgaaataaagcccata
ccaagcaacattgacaagagcctttacgtggcagaatatcacagtgaacctgtagaagat
gagaaacagtaa
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