Campylobacter jejuni 32488: M635_04500
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Entry
M635_04500 CDS
T02759
Name
(GenBank) recombination protein RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cjz
Campylobacter jejuni 32488
Pathway
cjz03410
Base excision repair
cjz03430
Mismatch repair
cjz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cjz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M635_04500
03430 Mismatch repair
M635_04500
03440 Homologous recombination
M635_04500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cjz03400
]
M635_04500
DNA repair and recombination proteins [BR:
cjz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
M635_04500
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
M635_04500
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
M635_04500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Response_reg
Motif
Other DBs
NCBI-ProteinID:
AGQ94837
LinkDB
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Position
874445..876016
Genome browser
AA seq
523 aa
AA seq
DB search
MKIINKNEIKKILASRFEKDLHTKLCDLPLPCCLKDAYKAANRIKEAVEKNEKVAIVGDY
DVDGIISCVIMAEFFDDIGFDYIIRIPNRFKDGYGLNAEIINELDVNLIITVDNGIAALE
AAKLCKEKNIDLIITDHHMPQDVLPDAFAIINPKQKDCDFPEIEICGAQVAWYLIAALKE
VCKLKYDMCKFLELLAIAIVADMMELRDLNRALVRRGIDHINKSKRAAFRAIKHYYQKDK
FALDNIGFLIAPLINSAGRMDDASISYEFLHTKDFNKALEYLEQIVSFNESRKDEEKQLF
EDSLNQIDENDSCIVVSGLNWHEGVLGIVASRLAKHFNKPAFVFSQNEEHLKGSARSVGK
IDILALISKTNSILSNYGGHKGAAGISLNSENFEQFKNKIKKECSQISESEFLDTDEILG
ILEPSEIDFEMLEILESFEPFGHKNPRPFFVLENLCVKNKKLLGKDEKHLKLVLTKENKT
IEALFFNFDKEPELNQNISLLGSISKNEFRGMVTPQFVVKEIL
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgaagataattaataaaaatgaaattaaaaaaattttggcttcacgctttgaaaaagat
ttgcataccaaactttgtgatctgcctttgccatgctgtttaaaggatgcatataaagca
gctaatcgcatcaaagaagctgtagaaaaaaatgagaaagtcgccatagtaggagattat
gatgttgatggaatcatttcttgtgttattatggcagaatttttcgatgatataggtttt
gattatattataagaattccaaatcgttttaaagatggatatggattaaatgctgagatc
atcaacgaacttgatgtaaatttaataataacagtagataatggaatagctgctcttgaa
gcagccaaactctgtaaagaaaaaaatatagatttgattatcactgatcatcatatgcct
caagatgttttacctgatgcttttgccattatcaatccaaagcaaaaagattgtgatttt
ccagaaattgaaatttgtggagctcaagtcgcatggtatttgatagcggctttaaaagag
gtgtgcaagcttaaatatgacatgtgtaaatttttagaacttttggcgattgcaattgtt
gcagatatgatggaacttagagatttaaatcgtgctttagtaaggcgtggcatagatcat
attaacaaatctaaaagggctgcttttagggctattaagcattattatcaaaaggataaa
tttgctcttgataatataggatttttaattgctccgcttataaatagtgctggaagaatg
gatgatgcaagtatttcttatgaatttttacacactaaagattttaataaagctttagaa
tatctagagcaaattgttagttttaatgaaagtcgtaaagatgaagaaaaacagcttttt
gaagatagtttaaatcaaatcgatgaaaacgattcttgtattgtggtatcgggtttaaat
tggcatgaaggtgttttagggattgtggcaagtcgtttagctaaacattttaataaacct
gcttttgtattttctcaaaatgaagaacacttaaaaggcagcgcaagaagtgttggcaag
attgatattttagctttaatttctaagacaaattctatattaagcaattatggtggtcat
aaaggtgctgctggaatcagtttaaactctgaaaattttgaacaatttaaaaataaaatc
aaaaaagaatgttcgcaaatttctgaaagtgaatttttggatacagatgaaattttagga
atcttagaacctagcgaaattgattttgaaatgcttgaaattttagaatcttttgaacct
tttggacataaaaatccacgacctttttttgttttagaaaatctttgtgtaaaaaataaa
aaacttctaggtaaagatgaaaaacacttaaagcttgttttaactaaggaaaataaaacc
atagaagctttattttttaattttgataaagagccagaattgaatcaaaatatttctttg
cttggaagtatttctaagaatgaatttaggggaatggtaactccacagtttgttgttaaa
gagattttataa
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