Corynebacterium kefirresidentii: I6I12_09270
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Entry
I6I12_09270 CDS
T07267
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
ckf
Corynebacterium kefirresidentii
Pathway
ckf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ckf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
I6I12_09270
09124 Replication and repair
03420 Nucleotide excision repair
I6I12_09270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ckf03021
]
I6I12_09270
03400 DNA repair and recombination proteins [BR:
ckf03400
]
I6I12_09270
Enzymes [BR:
ckf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I6I12_09270
Transcription machinery [BR:
ckf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
I6I12_09270
DNA repair and recombination proteins [BR:
ckf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
I6I12_09270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QQN47319
LinkDB
All DBs
Position
1930526..1932151
Genome browser
AA seq
541 aa
AA seq
DB search
MNGPLIVQSDKTVLLEVDHAQAAEARAALAPFAELERAPEHVHTYRITPLALWNARAAGH
DAEQVVDVLENYSRFPVPQALLIDVAETMSRYGRVRLHAHPAHGLILESEEPPILEELSR
GATGKLLGARIDEHSIAVPPSERGRLKQALLKAGWPAEDLAGYVDGESHPIALNHDGWQL
RDYQQYATEAFWSGGSGVVVLPCGAGKTIVGAAAMAKAESTTLILVTNTVAGRQWRDELL
RRTTLTENEIGEYSGEKKEIKPITIATYQVVTRKTKGEYRALELFDSRDWGLIIYDEVHL
LPAPVFRMTSDLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKELEMAGYIATAE
CIEVRVDMDAEERMLYATAQPRDRYRIAAQAAAKLRAVDKILARHPQQALIIGGYVDQLK
ELGAHLDAPVIDGSTSTAKRERLFQQFRDGSLPVLVVSKVANFSIDLPEAALAIQVSGTF
GSRQEEAQRLGRLLRPKEEEALFYSLVTRDSLDADYAVHRQRFLAEQGYAYRLIDALDLE
Q
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaccattaattgtgcagtcggataagaccgtcctgctcgaggtggatcacgcc
caggccgcagaggcccgcgccgcgctcgctccctttgcagagctggagcgcgctcccgag
cacgtgcacacctaccgcattactccgctcgcgctgtggaatgcccgcgcggccggacac
gacgccgagcaggtcgtcgacgtcctcgaaaactactcgcgctttccggtcccccaagcc
ctgcttatcgacgtcgccgaaaccatgtctcgatacggccgcgttcgcctgcacgcccac
ccagcccacggcctcattctcgagtccgaagagccgcctatcctggaagaactctcccgc
ggcgcaaccggaaaactccttggcgctcgcatcgacgagcattccatcgccgtcccaccc
tccgagcgcggccgcctcaagcaagccctcctcaaggcgggctggccggcagaagacctc
gcaggttatgtcgatggcgagtcccaccccatcgccctcaatcatgatggatggcaactg
cgcgattatcagcagtacgccaccgaggccttttggtccggcggctctggcgtcgtggtg
ctgccgtgcggtgctggcaaaaccatcgtcggtgcggcagccatggccaaggcggaatcc
accacgctcatcttggtcactaataccgtcgccggccgccaatggcgcgacgagctcctg
cgccgcaccacgctgacggaaaatgaaatcggcgaatactccggcgagaagaaggaaatc
aagcccatcaccattgccacctaccaggtggtcacgcgtaaaaccaaaggcgaataccgc
gccctcgagctcttcgactcccgcgattggggcctcatcatctacgacgaggtccacctc
ctgcccgcgccggtatttcgcatgacttcggacctccaatcgcggcgtcgactagggctc
accgccaccctcgtgcgcgaggacggccgcgagggcgacgtcttttccctcatcggacct
aagcgctacgacgccccatggaaagagctcgagatggccggctatatcgccaccgccgag
tgcatcgaggtccgcgtagacatggacgccgaggagcgcatgctctatgccaccgcccaa
cctcgcgaccgctaccgcatcgctgcccaggctgccgccaagctccgcgcggtcgacaaa
atcttggcccgccacccgcagcaggcgcttatcatcggcggctacgtcgaccagctcaaa
gaacttggcgcgcatctcgacgcccccgtaatcgatggctccacctccactgctaagcgc
gaacgcctcttccagcaattccgggatggcagccttcccgttctggtggtgtccaaggtc
gccaatttctccatcgatctccccgaggccgccctagccatccaggtctccggcaccttc
ggttcccgccaggaagaggctcagcgccttggccggctactccgccccaaggaagaagag
gcgctcttttattcgctggtcacccgcgatagcctcgatgctgactacgccgtgcaccgc
cagcgtttcctcgccgaacaaggatatgcctaccggcttatcgacgcactagacttagaa
caatga
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