Chryseobacterium lactis: EG342_01120
Help
Entry
EG342_01120 CDS
T06580
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
clac
Chryseobacterium lactis
Pathway
clac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EG342_01120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clac03019
]
EG342_01120
03400 DNA repair and recombination proteins [BR:
clac03400
]
EG342_01120
Enzymes [BR:
clac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EG342_01120
Messenger RNA biogenesis [BR:
clac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EG342_01120
DNA repair and recombination proteins [BR:
clac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EG342_01120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Cas3-like_C_2
BrxL_ATPase
PF0610-like_N
DUF7022
Motif
Other DBs
NCBI-ProteinID:
AZA80600
UniProt:
A0A3G6RKX7
LinkDB
All DBs
Position
236690..238594
Genome browser
AA seq
634 aa
AA seq
DB search
MISSQDFQKLKYDTLKYFWGYTGFRDSQEEIINSVLNEKDTLVLLPTGAGKSLCYQLPAL
LKEGTCLVISPLLALMKDQVNQLKFRGIDAEYLSSELDEYDAENIYNRCKEGLTKLLYVS
PERLTNSQFLQNIEEIQLSFIAVDEAHCISEWGQDFRPSYQNIKNFRTNNPEIPCLALTA
TATPKVLEEIKNKLELKNPGVFQKSFKRDNIRIFSEEVSDKFQRVLDILKYNNDSGIVYV
RTRKEAELLDEFLKKNQLKNVDYFHAGLTTKEKNTRQATWNKSDNHVLISTNAFGMGIDK
DNVRFVIHYSPAASLENYYQEIGRSGRDGKDSFAFMLWNKQELSNFDEILKNQTPNKAEF
LRIISYLYSIFQVAEFELPEKTFQLNSSGIQNFTRLSKAKINNVLGFLHNQEIIYYNDNK
SLSSLELFIKADEIDQLPQKDAYFIELLLRTMSGITTHKVLFSEQQVSNKIGVGLPLIKE
RLKELQQKNYLEYIDGALSSIKFLKPRDERAIQNAYWKLFEHIQKNKIQKWEEMKFYVEN
NDYCKMKLILAYFGEKNSKNCGQCSVCEKNKQSIFGKNISQQIINLLSKKPSTIEELSVQ
LSYHSKNNILENLIFLLDSGKIKMLNFRTYAINH
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgatttcttcgcaggattttcaaaaattaaaatatgatactcttaagtatttttggggc
tacaccggcttcagggattctcaggaagaaatcatcaattccgttcttaatgaaaaagat
acgctggttctacttcctaccggtgccgggaagtctttatgttaccagcttcctgcctta
ttaaaagaaggaacctgcctcgttatctcgccattgcttgctttaatgaaggatcaggta
aaccagcttaagttccgtgggatagatgctgagtatctgtcttcagaattggatgaatat
gatgctgaaaacatttataaccgttgtaaggaagggcttacgaaacttttatatgtttct
cctgaacgattaacaaatagtcagtttctacagaatattgaagaaattcagctatcattc
atcgcggtcgacgaagcccactgtatttcagaatggggacaggatttccgtccaagttat
cagaatattaaaaacttcagaactaacaatcctgaaattccttgtttggccttaactgct
acggccactccaaaagtactggaagaaatcaaaaataaactggaactgaaaaatccaggt
gttttccaaaaaagttttaaaagagataatatcagaattttttcagaagaagtttccgat
aaattccaacgtgtccttgatatccttaaatacaacaatgattcgggaatcgtatatgta
agaacccgaaaagaagcagaattactggatgaatttttgaaaaaaaatcaattaaaaaat
gttgattactttcatgccgggctaactacaaaagaaaaaaacaccagacaagctacctgg
aacaaaagtgataatcatgtgttgatttccaccaacgcgtttggaatgggaatcgataag
gacaatgtacgttttgtgatccactactcacctgctgcatctttagaaaattattatcag
gaaatcggaaggtcaggaagagatggaaaagacagttttgcgtttatgctttggaataag
caggagctttcgaattttgatgagattttaaaaaatcaaactccgaataaggctgaattt
ttaagaattatcagctacctctactctatttttcaggtcgcagaatttgagttgccggaa
aaaacattccagcttaatagttcaggaatacaaaacttcacaagattatcaaaggcaaaa
atcaataatgttcttggctttttgcataatcaggaaatcatttattataatgacaataaa
agcctgtcttctctggagctttttattaaggctgatgaaatagatcaattacctcaaaaa
gatgcttatttcatagagcttcttctccgtaccatgtccggaatcactacgcacaaagta
ttatttagcgaacaacaggtaagtaataaaatcggagttggtcttccattaataaaagaa
cgacttaaagaacttcaacagaaaaactaccttgaatacatcgacggtgctttgtctagc
atcaagttcttaaaacctcgggatgaaagagctattcagaatgcttactggaaactgttt
gaacacattcagaaaaataaaatccagaaatgggaagagatgaaattttacgtagaaaat
aacgactactgcaaaatgaaacttatcctggcttattttggagagaaaaattcaaaaaat
tgtggacagtgttctgtttgtgaaaaaaataaacaatccattttcggaaagaatatttcc
cagcagattattaatttattatctaagaagccttcaaccatcgaggaactttctgtacaa
ctgagttatcattctaaaaataatatcctggaaaaccttatttttcttttagattccgga
aagataaaaatgctgaacttcagaacctatgcaattaatcattag
DBGET
integrated database retrieval system
