Chryseobacterium lactis: EG342_12970
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Entry
EG342_12970 CDS
T06580
Name
(GenBank) TolC family protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
clac
Chryseobacterium lactis
Pathway
clac01501
beta-Lactam resistance
clac02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
clac00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EG342_12970
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EG342_12970
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clac02000
]
EG342_12970
01504 Antimicrobial resistance genes [BR:
clac01504
]
EG342_12970
Transporters [BR:
clac02000
]
Other transporters
Pores ion channels [TC:
1
]
EG342_12970
Antimicrobial resistance genes [BR:
clac01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EG342_12970
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
EG342_12970
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
EG342_12970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF5779
Tri-helical
Motif
Other DBs
NCBI-ProteinID:
AZA82730
UniProt:
A0A3G6RDI8
LinkDB
All DBs
Position
2885468..2886919
Genome browser
AA seq
483 aa
AA seq
DB search
MKRLNHRNIILGIAALSFVSCAVPKVTDLKKAEALPEHLIKTGNKTDSEEFQQLNLKAYF
TEPRLLELFDKVIQANPDFQIAQQRVEIANSFLQRSKMDLLPSLDVGVEVSGNRYGKYTM
EGVGNYDTNLSPNITEEQKINRDFAPNYWLGGRSSWEIDVWGKLKNKKLAAQKKFLASTE
GLRLLQVELFTDIANLYYQLVALDNRLAIYQKNYNLQQRAFEIVLAQREVGKATELAVQQ
FKAQNNNWLAEIEHIKVEIVTVEQAITTLTGSYGGEVKRGNVLMPTNMDVLNKTINVESV
IHSRPDVAANYYVLEASQADAKAARAAFYPKIDLGAGFGLNSFSVETLFKPSSLAGQLLG
GLMVPVFNKGQLKYEFKVASKEQEIAFLNYQKSITTAFNELQSILKQTKIYERVLKLKSE
EVGFLDRGVEVSNDLYLTGYANYFELINSQKSKLTAELDLLQFQHQNTRNNVLLFKALGG
KLD
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgattaaaccatagaaatataatattaggtattgccgccttaagttttgtctca
tgtgctgtaccaaaagttaccgatttgaaaaaagctgaagcactaccggagcatcttatt
aaaaccgggaacaagacggattcagaagaatttcaacaactcaatctgaaagcctacttt
acagaacctcgtctgcttgaactttttgataaagtgattcaggctaaccccgattttcag
attgcacagcaaagagtagaaattgcaaacagttttctccaaagatcaaaaatggatctt
ctgccttcacttgatgtgggggtagaagtctccggaaatcgatatggaaaatataccatg
gaaggagttggaaattatgataccaatctttctcccaatattactgaagaacagaagatc
aatcgtgattttgctcccaattactggctgggaggaagaagcagctgggaaattgatgtg
tggggtaaactgaaaaataaaaagctagcagcccaaaagaaatttctcgcttccacagaa
gggttgagactcttacaggtagaactttttactgatattgctaatctgtattatcagttg
gtcgctttagacaatcgcctggctatttatcaaaaaaattacaaccttcagcagagggct
tttgaaattgttctcgctcagcgtgaagtcgggaaagcgacggaactcgcggtgcaacag
tttaaggctcagaataataactggcttgcggagattgaacatatcaaagttgagattgta
actgtagagcaggcgattaccactcttaccgggagttatgggggagaggtaaaacgaggt
aacgtactgatgcctactaatatggatgttttaaataaaaccattaatgtagaatcggtt
attcattcccggccggatgtggcagccaattattatgtgctggaagcctctcaggcagat
gcaaaagctgctagagctgcattttacccgaaaatagatcttggagcaggtttcggattg
aattccttttctgttgaaacattatttaaacccagttctctggcagggcagctgctcggt
gggttgatggttcctgttttcaataaagggcagctgaaatatgaatttaaagtcgccagc
aaagagcaggaaattgcttttttaaactatcagaaaagcattaccacagcctttaatgaa
cttcagtcgattttgaaacaaacgaagatttatgaacgtgttttaaaattaaaatccgaa
gaagtcggctttctggatcgcggggttgaagtatccaatgatctatatctgacaggatat
gccaattattttgaactgattaattcccagaaaagcaaactgacggcagaacttgatctc
ctgcagtttcagcatcagaacaccagaaataatgtgttgctgtttaaagcattgggtgga
aagctggattaa
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