Cedecea lapagei: NCTC11466_00370
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Entry
NCTC11466_00370 CDS
T05810
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
clap
Cedecea lapagei
Pathway
clap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC11466_00370 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clap03019
]
NCTC11466_00370 (pnp)
03016 Transfer RNA biogenesis [BR:
clap03016
]
NCTC11466_00370 (pnp)
Enzymes [BR:
clap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NCTC11466_00370 (pnp)
Messenger RNA biogenesis [BR:
clap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NCTC11466_00370 (pnp)
Transfer RNA biogenesis [BR:
clap03016
]
Prokaryotic type
tRNA degradation factors
NCTC11466_00370 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_2
aRib
KH_2
DUF5813
DUF4172
SLS1_KH2
Motif
Other DBs
NCBI-ProteinID:
VEB95265
UniProt:
A0A447UXC8
LinkDB
All DBs
Position
1:358507..360636
Genome browser
AA seq
709 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSV
NPQVHPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTAEELKTSKLDLVVA
GTQSAVLMVESEAELLSEDQMLGAVVFGHDQQQVVINEINALVAEAGKPRWDWQPEAVNE
ALNARVAALAESRLSDAYRITEKQERYAQVDVIKADVIATLTAEDDALDAGELSDILHAI
EKNVVRSRILAGELRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQNLDELMGERTDSFLFHYNFPPYCVGETGMVGSPKRREIGHGRLAKRGVLAVMPEADK
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNFVVLSD
ILGDEDHLGDMDFKVAGSREGISALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
IDAPRGDISEFAPRIHTIKINPDKIKDVIGKGGAVIRALTEETGTTIEIEDDGTVKIAAT
DGDKAKHAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATEQSPADEAAPAAPEAE
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatccgatcgttcgtaaattccagtatggccagcatacggtcacgcttgagacc
ggcatgatggctcgccaggctaccgctgctgttatggtaagcatggatgacaccgcggta
ttcgttaccgttgtgggccagaaaaaagccaaaccaggccaggacttcttccccctgacc
gttaactaccaggagcgtacctacgctgctggccgtatcccgggaagcttcttccgtcgt
gaaggccgcccaagcgaaggcgaaaccctgatcgcgcgtctgattgaccgcccggttcgt
ccgctgttcccggaaggcttcgtcaacgaagtgcaggttatcgcgaccgttgtttccgtg
aacccacaggtacaccctgatatcgttgccatgattggtgcctctgcggcgctgagcctg
tccggtattcctttcaacggcccaatcggtgcggctcgtgtgggttatattaacgaccag
tacgtgctgaacccgaccgctgaagagctgaaaaccagcaagctggatctggttgttgcc
ggtacccaaagcgcagtcctgatggttgaatccgaagctgaactgctgagcgaagaccag
atgctgggcgccgttgtcttcggtcacgatcagcagcaggttgttatcaacgaaatcaac
gcactggttgccgaagctggcaaaccacgttgggactggcagccagaagcggtaaacgaa
gcgctgaacgctcgcgttgctgcgctggcagaatcccgtctgagcgatgcttaccgcatc
actgagaaacaagagcgttatgcgcaggttgacgtcatcaaagctgacgttattgcgacg
ctgaccgctgaagatgacgctctggatgccggtgaactgtccgacattctgcacgctatc
gagaaaaacgttgttcgtagccgtatcctggcaggcgagctgcgcatcgatggtcgtgaa
aaagacatgattcgtggcctggacgtgcgcaccggcgttctgccacgtactcacggctct
gcgctgtttacccgcggcgaaactcaggcgctggtgaccgcgactctgggtaccgcacgt
gatgcgcagaatctggacgagctgatgggcgagcgtaccgacagcttcctgttccactac
aacttccctccatactgcgtcggcgagaccgggatggtaggttctcctaagcgtcgtgaa
attggtcacggtcgcctggcgaagcgtggcgtgctggccgttatgccagaagcagataaa
ttcccgtacaccgttcgtgtggtttctgaaatcaccgaatctaacggttcttcttccatg
gcttccgtgtgcggtgcttctctggcactgatggacgcaggtgtgccgattaaagccgcc
gttgcgggtatcgcgatgggcctggtgaaagaaggcgacaactttgttgtactgtccgac
attctgggtgacgaagatcacctgggcgatatggactttaaagttgccggtagccgtgaa
ggtatctctgcgctgcagatggatatcaaaatcgaaggtatcacccgcgaaatcatgcag
gtggctctgaaccaggctaagggtgcgcgtctgcacattctgggcgtgatggaacaggct
atcgatgcgccgcgtggcgacatctccgaattcgctccgcgtattcacaccatcaaaatc
aacccggacaagatcaaagacgtgatcggtaagggcggtgctgtgattcgtgcgctgacc
gaagaaaccggcaccaccatcgaaatcgaagatgacggtaccgtgaagatcgcagcgacc
gacggtgataaagcgaaacacgctatccgtcgtatcgaagagatcaccgctgaaatcgaa
gtgggccgtatctacaacggtaaagtcactcgtatcgttgatttcggtgcatttgtggct
atcggtggcggtaaagaaggtctggttcacatctctcaaatcgctgacaagcgcgtagag
aaagtgactgactacctgcagatgggtcaggaagttccggtgaaagtactggaagttgac
cgtcagggccgcgtccgtttaagcattaaagaagctaccgagcagtccccggcagacgaa
gcagcacctgctgcaccagaagctgagtaa
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