Cedecea lapagei: NCTC11466_03875
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Entry
NCTC11466_03875 CDS
T05810
Symbol
carB
Name
(GenBank) Carbamoyl-phosphate synthase large chain
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
clap
Cedecea lapagei
Pathway
clap00240
Pyrimidine metabolism
clap00250
Alanine, aspartate and glutamate metabolism
clap01100
Metabolic pathways
clap01240
Biosynthesis of cofactors
Module
clap_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
clap00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
NCTC11466_03875 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
NCTC11466_03875 (carB)
Enzymes [BR:
clap01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
NCTC11466_03875 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_4
CoA_binding_2
ATP-grasp_5
SmpA_OmlA
Motif
Other DBs
NCBI-ProteinID:
VEC00890
UniProt:
A0A3S4IKF8
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All DBs
Position
1:complement(3881589..3884813)
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AA seq
1074 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATA
DAIDKAEDRRRFDIAMKKIGLDTARSGIAHNMEEALAVAADVGYPCIIRPSFTMGGTGGG
IAYNREEFEEICERGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDPM
GIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFSVNPKTGRLIIIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEA
LTKIRRELKDAGAERIWYVADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEQVAEVG
ITGLNHDFLRMLKRKGFADARLAKLAGVRESEVRKLREQYDLHPVYKRVDTCAAEFATDT
AYMYSTYEDECEANPNNDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN
CNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLARALEAAGVP
VIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEQAVEKAVQIGYPLVVRPSYVL
GGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAICDGETVLIGGIME
HIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKDNEVYLI
EVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLVEQGVTKEIIPPYYSVKEVVLPFNKF
PGVDPLLGPEMRSTGEVMGVGRTFAEAFSKAMLGSQSTMRKPGRALLSVREGDKERVVDL
AAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTAGR
QAIEDSKLIRRSALQYKVHYDTTLNGGFATAMALNADATEKVTSVQEMHAQIKG
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacagatataaaaagcatcctgatcctcggcgcaggcccgattgttatc
ggccaggcctgtgagttcgactactctggcgctcaggcttgtaaagcgctgcgcgaagag
ggttaccgcgttatcctggtgaactccaacccggccaccatcatgaccgacccggagatg
gctgatgcgacctacatcgagccgattcactgggaagtcgtgcgcaaaatcatcgaaaaa
gagcgacctgatgcggtcctgccgaccatgggcggccagaccgcgctgaactgtgcgctg
gagctggagcgtcagggcgtgctggaagagtttggcgtgaccatgatcggcgcaaccgca
gacgccatcgacaaagccgaagaccgtcgtcgtttcgacatcgcgatgaaaaaaatcggt
ctcgataccgcgcgctccggcattgcacacaatatggaagaagcgctggccgtcgcggcc
gacgtgggttatccgtgcatcatccgtccatcctttaccatgggtggcaccggcggcggt
atcgcctacaaccgtgaagagtttgaagagatttgcgagcgcggcctggatctctcccca
accaaagagctgctgattgatgaatcgctgatcggctggaaagagtacgagatggaagtg
gtgcgtgataaaaacgacaactgcatcatcgtctgctctatcgaaaacttcgacccgatg
gggatccacaccggcgactccatcaccgttgcgccagcgcaaacgctgaccgataaagag
taccaaatcatgcgtaacgcctcgatggcggtactgcgtgaaatcggcgtggaaaccggc
ggctcaaacgtccagttctccgtgaacccgaaaacgggccgtctgatcatcatcgagatg
aacccacgcgtgtctcgctcttccgctctggcttctaaagcgaccggcttcccgattgct
aaagtggctgcgaagctggccgtaggctacacccttgacgagctgatgaacgatatcacc
ggcggccgtacaccggcttccttcgagccgtctatcgactatgtcgtcaccaagatccct
cgcttcaacttcgagaagtttgccggcgcaaacgaccgcctgactacccagatgaaatcc
gtgggcgaagtgatggcgattggccgtactcagcaggaatccctgcagaaagcgctgcgc
ggcctggaagtgggtgctacgggctttgacccgaaagtcagcctggatgacccggaagcg
ctgaccaaaattcgccgtgagctgaaagacgcgggcgccgagcgtatctggtacgtggct
gatgcattccgtgctggcctgtcggttgacggcgtattcaacctgaccaacatcgaccgt
tggttcctggtgcagattgaagagctggtgcgtctggaagagcaggttgccgaagtgggg
atcaccgggctgaatcatgacttcctgcgaatgctgaagcgtaaaggttttgcggatgcg
cgtctggcaaaactggccggggttcgtgaatccgaagttcgcaaactgcgtgagcagtat
gacctgcaccctgtctacaaacgcgtggatacctgtgcggcagagtttgcgaccgacacc
gcatatatgtactccacctatgaagatgagtgcgaagctaacccgaacaacgaccgcgat
aaaatcatggtgctgggcggtggtccaaaccgtatcggccagggcattgagttcgactat
tgctgcgtacacgcctcgctggcgctgcgtgaagatggttacgaaactatcatggttaac
tgcaacccggaaaccgtctctaccgactacgacacctccgaccgcctctacttcgaaccg
gtcaccctggaagatgtgctggaaatcgtccgcgttgagaagccgaagggcgttatcgtg
cagtacggcgggcaaaccccgctgaagctggctcgtgcgctggaagctgctggcgtgccg
gttatcggtaccagcccggatgctatcgaccgcgcggaagaccgcgagcgcttccagcat
gccgttgagcgcctgaagctgaagcagcctgctaacgccaccgtgacggccattgagcag
gcggtggagaaagccgtgcagattggttatccgctggtggttcgcccttcctatgtcctg
ggcggccgcgcgatggagatcgtctacgacgaagccgacctgcgtcgctacttccagact
gcggttagcgtctctaacgatgcgccagtgctgctcgaccgcttccttgatgacgcggtt
gaagtggatgtggacgccatttgcgacggtgaaaccgtgctgattggcggcatcatggag
catatcgagcaggcgggcgtgcactccggtgactccgcgtgttctcttccggcttacact
ttgagccaggagatccaggacgtgatgcgccagcaggtgcagaagctggccttcgagctg
caggttcgtggtctgatgaacgtccagtttgcggtgaaggacaacgaagtttacctgatt
gaggtgaacccacgtgctgcgcgtaccgtgccgtttgtttccaaagcaacgggcgtgccg
ctggcgaaagttgccgctcgcgtgatggcaggcaaaacgctggttgagcagggcgtcacc
aaagagatcatcccgccgtactactcggtgaaagaagtggttctgccgttcaacaagttc
ccgggcgtagacccgctgttagggccagagatgcgctctaccggggaagtgatgggcgtc
ggccgcaccttcgcagaagctttctctaaagcgatgctgggcagccagtccacgatgcgt
aagccgggccgcgcgcttctttccgtgcgcgagggcgataaagagcgcgtagtagacctg
gccgccaagctgcttaaacagggctttgagctggatgctacccacggcacggcgattgtt
ctgggcgaagcgggtattaatccacgtctggtgaacaaggtgcatgaaggccgtccgcac
attcaggaccgtatcaagaatggcgagtacacctacatcatcaataccaccgcgggccgc
caggcgattgaagattccaagctgattcgccgcagcgcgctgcagtacaaagtgcattac
gacaccacgctgaacggcggcttcgctacggcgatggcgctgaacgcagacgctaccgag
aaggtgacctcggtgcaggagatgcacgcccagattaagggctaa
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