Cedecea lapagei: NCTC11466_04538
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Entry
NCTC11466_04538 CDS
T05810
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
clap
Cedecea lapagei
Pathway
clap03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
clap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC11466_04538 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clap03400
]
NCTC11466_04538 (mutM)
Enzymes [BR:
clap01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NCTC11466_04538 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NCTC11466_04538 (mutM)
DNA repair and recombination proteins [BR:
clap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC11466_04538 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
C1_2
Motif
Other DBs
NCBI-ProteinID:
VEC01975
UniProt:
A0A447V8G2
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All DBs
Position
1:complement(4559253..4560062)
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AA seq
269 aa
AA seq
DB search
MPELPEVETSRRGIEPHLVGETILHAVVRNARLRWPVSDEIHALSDKPVLSVQRRAKYLL
LELPDGWIIIHLGMSGSLRILAQELPAEKHDHVDLIMGNGKVLRYTDPRRFGAWLWVKEL
EGSNVLSHLGPEPLSDAFHAEYLREKSAKKKTAIKPWLMDNKLVVGVGNIYASESLFAAG
IHPDRSAQSLSKKESETLVAAIKAVLQRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRE
GEPCRVCGTPIVAAKHAQRSTYYCRRCQR
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaggtagaaaccagccgacgcggtattgagccgcatctggtgggt
gaaacaattttgcatgccgtggtgcgcaatgcgcggctacgctggccggtttctgatgaa
atacatgccctgagcgataagccggtgttaagcgtgcagcgtcgggcgaagtatttgctg
ctggagctgcccgatggctggataatcattcatctggggatgtccggcagcctgaggatc
cttgcgcaggagcttcctgccgagaagcacgatcatgttgatctgatcatgggcaacggt
aaagtcctccgctacaccgatccgcgtcgttttggggcctggctgtgggttaaagagctt
gaaggcagcaacgtattgtcccatctcggacctgagccgctaagcgatgcattccatgct
gagtatctgcgcgagaaatcggctaaaaagaaaacggcgataaagccctggctgatggat
aacaaacttgtcgttggcgtgggaaatatctatgccagcgaatctttgtttgcggcaggt
attcaccctgaccgtagcgcgcaatcactctcaaaaaaagagtctgaaacgctggttgcg
gctatcaaagcggtgctgcagcgctctatcgaacagggaggcacgacgttaaaggatttt
ctccaatccgatggcaaaccaggttactttgcgcaagagctgcaggtgtatggaagggaa
ggtgagccttgccgggtatgcggtacgccgattgttgccgctaaacacgcgcagcgcagc
acatactattgccgtcgctgccagcgctag
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