Caldicellulosiruptor acetigenus 6A: Calla_0994
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Entry
Calla_0994 CDS
T01600
Name
(GenBank) ABC-type bacteriocin transporter
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
clc
Caldicellulosiruptor acetigenus 6A
Pathway
clc02010
ABC transporters
clc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
clc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Calla_0994
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Calla_0994
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
clc01002
]
Calla_0994
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clc02000
]
Calla_0994
Peptidases and inhibitors [BR:
clc01002
]
Cysteine peptidases
Family C39
Calla_0994
Transporters [BR:
clc02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
Calla_0994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
SMC_N
AAA_22
ABC_ATPase
nSTAND3
DUF87
AAA_24
AAA_18
AAA_29
AAA_16
RsgA_GTPase
DUF5906
AAA
NACHT
Motif
Other DBs
NCBI-ProteinID:
AEM73632
UniProt:
G2PVC0
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Position
complement(join(1066677..1066985,1066987..1068882))
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AA seq
734 aa
AA seq
DB search
MRRRYYCVKQHDITDCAAATLATICLQYGKEVSIARIREMAGTDRFGTTAYGVVKAAKEL
GFDAKAVRAETKEAIFEKIPLPCIAHVLIDGKLFHYVVIHEISKEKIVIADPGKGIVEQK
PEEFFKIWTGILILLVPNERFKKGKQEGVLKKFFKLLSPQKSLILNIFAVSIVYTLLGIG
AAFYYKFLMDDVIPNLLNNTLHVIAAGAILITIFKVILGAFRVRLLIHLSQRLDIKLMLG
YYEHVIELPMSFFGSRKIGEIISRFMDASKIRDAVSGATLTLMIDSIMAVVGASILYLQN
STLFFIALVMVLLYAAVVFGFNRALREANRQEMEDNAILTSYLVESLSGIEVVKAFNIEE
DVNFKTESKFVKLLKDVFKVANLNNLQSNISTGIAAVGVMVILWVGAHKVINGQMSIGEL
FTFNALLAYFVDPIKNLIGLQPMLQTAIVAAERLSEILELESEFKEDEDKKLAPSLKGDI
EIEGLNFRYGTRQLVLRDINLKIRSGERIAIVGESGSGKTTLAKLLLGFYDYESGEIRIN
GYNLKDINKRHLREKIAYISQDIFLFSGTIFENLVLGNRNLKMEDVIEISRLTTLDEFVS
KFPLRYNTMIEENGANLSGGQKQLIAITRALLKKPEIVIMDEATSNLDSVTEQAIGKVIE
KVCEGITTIIIAHRLSTILKCDRVVVMHEGRIVEAGTHEELMRKKGYYYNLWREQLMGLE
QKGLWDLVGSAAKS
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgagaaggagatactattgtgtaaagcagcatgatataacagattgtgcggcagcgact
ttagcaacaatttgcctgcagtatggaaaggaagtatcgatagccagaataagagagatg
gcagggacagataggtttggcacaacagcatatggagttgtaaaggcggcaaaagagctt
ggatttgatgcaaaagcagtcagagcagaaactaaggaggctatatttgaaaaaatacca
cttccgtgcatagcgcatgtgttaatagatggaaagctatttcattatgttgtaatacat
gagattagtaaagaaaagattgtgatagcagacccggggaaggggattgtggagcaaaag
cctgaagagttttttaaaatatggacaggcattttgatacttcttgtaccaaacgagagg
ttcaaaaagggaaaacaagagggagttttgaaaaagttttttaagctgttgagtccacag
aagagcttgatattgaatatttttgcagtgtcaattgtatatacgttgcttgggataggg
gcagcgttttattacaagtttttgatggatgatgtaataccgaatcttttgaacaatact
cttcatgttatagcagcaggtgcgatattgattacgatatttaaggtgatattaggagca
ttcagggtaaggcttttgatacatttgagtcagagattggacattaaactgatgttaggg
tattatgaacatgtgatagagctgccgatgagtttttttggtagcaggaagataggagag
ataatttcgaggtttatggatgcgtcaaagataagggatgcagtatcaggtgcaacgctg
acgcttatgatagacagcataatggcagtggtaggcgcaagtattttatacctgcaaaat
tccacgctgttttttatagcccttgtgatggttttgctatatgcagcggtggtgtttgga
tttaacagggcattgagggaagcgaacagacaggagatggaagacaatgcaattttgaca
tcatatttggtagagtcactaagtggaatagaagtagtaaaagcattcaatatagaagaa
gatgtaaattttaagacagaaagtaagtttgtaaagcttttaaaagatgtgttcaaggta
gcgaatctaaacaatttgcagagtaatataagtactggtatagcagcggtaggtgttatg
gtaatactatgggtaggagcacacaaggtaataaatgggcagatgagcataggagagttg
tttacgttcaatgcactgcttgcatactttgtagacccgataaagaacttgataggattg
cagccgatgttgcagacagcaatagttgcagccgagaggcttagtgaaattttggaactt
gagagtgagtttaaagaggacgaagacaagaagttagctccaagtttgaagggtgatata
gagatagaaggtttgaacttcagatacggtacaagacagcttgtgctaagagatataaat
cttaagataagaagtggagagagaatagcgatagtaggggagagtggttcagggaagact
acattggcaaaactgcttttaggattttatgattatgaaagcggtgagataaggataaat
ggatacaatttaaaagatataaacaagaggcatttgagggaaaagatagcatatatatct
caagacatcttcttgttcagtggtacgatatttgagaatttggtattgggcaacaggaat
ttaaaaatggaagatgtgattgaaataagcagattaaccacactggatgagtttgtatca
aaatttcctttgagatacaataccatgatagaagagaatggagcgaatttgtcaggaggg
caaaaacaactgatagcgataaccagggcgcttttaaagaagcctgagatagttataatg
gatgaagcaaccagcaaccttgactctgtaaccgagcaggcgatagggaaggttatagag
aaggtatgtgaggggataacaaccataataatagcgcacaggctatcgaccatattaaag
tgcgacagggttgtggtaatgcatgaaggtaggatagtagaggcaggaacgcatgaggag
ctgatgagaaagaaaggatattattataacctgtggagagagcagctgatgggacttgag
caaaaagggctatgggatttggttgggagtgcagcaaagtcatga
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