Cimex lectularius (bed bug): 106668229
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Entry
106668229 CDS
T05603
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
clec
Cimex lectularius (bed bug)
Pathway
clec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106668229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clec03019
]
106668229
Messenger RNA biogenesis [BR:
clec03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106668229
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106668229
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
YozE_SAM_like
Motif
Other DBs
NCBI-GeneID:
106668229
NCBI-ProteinID:
XP_014252245
UniProt:
A0A8I6RTT4
LinkDB
All DBs
Position
Unknown
AA seq
2402 aa
AA seq
DB search
MNLDSLTLTLSQISYLVINLTKKNYTASVKEISKLVREYGFEADRHYLRSLFCYFEVGVT
YKESPQLQLLSEECTALLSKPAFVSSICFAFEKLIETKGPKTTQLLPQFSKAVKLSPIQE
VVFGIALLYSHNTEVASQATQFLKIKLPELIRSYINSDSNNCSVSEGGLSDTSPEVLHII
LSEIHKLNSLELFGLTAETKEAFLHNLRRDFPRDLVPIVLAPLLYSDNSELSMEKLLNDS
NNMSHNMVDSSVDDVVGELGLTFTNSVEGCRGHIAQLAGRELKASDMAHVLIMMLKSRAV
EFWLESEAAKEKSNDPLHIPSPWSIDNLIKASKELNPKLNWADVFLELDHPEFIVKNRHS
LYLIIHSIRSGIQSQQSYIPHSERFPVDHIYRTWKNPPAQLSLLQQILKNPDIFCLADYP
FHSIPVEILKTPPETENKEVTNWRSLSLLETVLNLAERGGLFPDVQDLLKVPAQLCPDVL
ALGLLQVPLQMSNFRLEILGSIMPIFLGNHPNSGIILHQAWHTSQFCIKQTIMHAMADWY
LRGDSDQSRLSRILDVAQDLKALSLLLNAQSYPFVIDLACLASRRGYLKLEKWLTDKIRE
HDEPFITELLKFLQKRVPHISGMGKEESISKSQLPHETLSTIILSLQTCVGNVSQDLSEA
IHNAVATCGVVVNKSRQAPPGVLRPHRGLEPFSQSSVYSSQVDSLNSGLAGMSLATTSTA
FTLPAALGQLVSNPGSPSRLMAASQSPAFPIMPLGAPGPSLVPQVGVNVPATMARLQLAQ
QQQPLEKTKISNVSTNLFRDMTFPVPKDIEDEANSYFQRIYNHPPHPTISIDDVLDMLKK
FMDSPKQRERDVFYCMLRNLFEEYKFFPQYPDKELFVTAQLFGGIIERGLVSDYRELGMA
LRYVLDALKKPLDSKMFYFGIAALDRFKSRLKDYHNYCEYIMSIPHFSRFPSHLIEYLEY
GLQSEEPPNRPQGPILPGGTSVVTTAYNTLAQTTVTTTTTVATKVSTTSVISSRPSIANA
TNIDTLLVATEKEDKMVTPPESLQDKVAFIFNNLSQLNLQTKCDELREIVSEEYYAWMAQ
YLVMKRASIELNFHILYSNFLDVLKIPELNVLVLQETFRNIRVLLRSDKGTANFSDRSLL
KNLGHWLGMLTLGRNKPILHDDLDLKSLLVEAYSKGQQELLYVVPFVAKVLESCSKSQVF
KPPNPWTMAIMNVLAELHQEADLKLNLKFEIEVLCKNLSLDVSELHPKIYLKDPENLKNL
EHQLSPPKSKVEVQSTTPLPPSQTPTQQATHNVLSSANEETPTRLANNTPTLTPINPPEP
RFNYLSINVTNIGNLAPHIIINTQMPLLQSHPQLKQYIRPALERAVQEWIHPVVDRAVKI
AVTTTEQIVKKDFALEPEESRMRAAAHHMVRNLAAGMAMITCRDQLLVSISNNLKANFLS
ALHNATEQQKSLIEQAASLFAQENMELACCFIQKTAMEKAVPEMDKLLLPEYERRKIART
EGRRYCDSSVLTYQAERMPEHLRLKVGGVTPQQTAVYEDLARNIPGFQPLTERDTAIFIP
KPVDSMTIVPSFPSAIPQMAYSTGGDELDSIFDKLTTELDHYVQTVLGNHTLPAVHNILD
LLVLTRRNREDLYAMSLVQKTVENLLELSTTSLDSEFILRHRELYLRILKTLQDPRAYGV
QWTNKQVTRAYLDCREEIKYNLDCLDVLLRNQFINLLQLDLHLAHAMDNGQNYVAINFAV
QVIQFYLVDDRNSLSFVTDQDFFNTSEVLVRIATHSRQPPEGLVALIELLRATHDPALIV
DSRTHASAHILSGLTQGKARDYDDPPGLAEKTEFLLREWVSIYNSAAGAKDPNKSFSIFV
SQMNYHGILKTDDLITRFFRLSTQMVVELCYRFLPDVSGASATSSRNKMFHTVDAYVKLI
SLLVKHSGDATNTATKVNLLNKVLGIIAGVLQQDHETHQTEFQQLPYQRIFIMLFLELNA
HESILEAINFQVLTAYFHTLHILRPAKSPGFAYAWLELVSHRLFLGRMLSPTPSQKSNVQ
SCPQGWIMYAQLLVDLFKYLAPFLRNAELAKPVTVLYKGTLRVLLVLLHDFPEFLCDYHY
GFCDAIPPNCIQMRNLILSAFPRNMRLPDPFTPNLKVDMLAEISSAPRVLTEFAFVIQPT
SFKKDLDHYLKARTPVTFLSDLRSNLQVSNEPGLRYNIPLMNALVLYVGTEAIAHIRKKG
LAPNMTTIAHSAHMDIFQNLAVDLDTEGRYLFLNGIANQLRYPNSHTHYFSCTLLYLFAE
ANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPTYKFWTHEFVHCAPEIEKLFE
SVARSCMVQKHVQTPAENNIPEINYKAFNDMTRKYQQHIMQESIKQFQHDFLCSNQVVMQ
LR
NT seq
7209 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggactcgttgactttaactttgtcacaaataagttatttggttataaattta
acgaaaaaaaattatacggcctccgtcaaggagatctcgaagttggtacgtgaatacggc
ttcgaagcagatagacattaccttcgtagtctcttctgttattttgaagtaggagtcaca
tacaaagagtctcctcaactgcagctgttgtcggaagagtgtactgcacttctgtcaaag
ccggcgtttgtctcgagcatttgttttgcattcgagaagttgatcgaaactaaaggacca
aaaactactcaacttcttccacagtttagcaaagcagtcaaattgagcccgattcaagaa
gtggtgtttggaatagcactgctttattctcacaatacggaagtggctagccaagctact
cagttcttgaaaatcaaattacctgagttaattaggtcatatataaattcagattcgaac
aattgtagtgtttctgagggtggtcttagtgatacatcgcctgaagtattgcatatcatt
ctcagcgaaatacacaaattaaattcattagaattatttggcctcactgcagaaacaaaa
gaggcatttttgcacaacttgagacgagactttccgcgagatcttgttcctattgttctc
gcaccgttgttgtattctgacaattcagaactttctatggaaaaacttctcaacgattca
aacaacatgtctcacaatatggttgatagcagtgtagatgatgttgttggggaattaggt
ttgacgttcacaaatagtgtagaaggatgcaggggacacatcgctcagctagcaggaagg
gaattgaaagcttcggatatggctcatgttcttataatgatgctcaaatcacgagcagtc
gagttctggctagagagcgaagcggcaaaagaaaagtcgaatgacccattgcacatccct
tctccttggagtatagataacctgattaaagcttctaaagaattgaatccaaaattgaat
tgggctgatgtgtttcttgaactggatcacccagaatttatagtcaaaaacaggcacagt
ttgtatttaattattcattcgatcagaagtgggattcagagtcaacagtcatacattcca
catagtgaaaggtttccagtagatcatatttacagaacctggaagaacccaccagcccag
ctttctttgctgcaacaaattctaaaaaatccggatatcttctgtctggcggattatcca
ttccactccatccctgtcgagattttgaaaactccaccagaaacagaaaataaagaagtc
accaactggagatccttgagtctgcttgaaactgttctgaatttagcagagagaggtggc
ttgttcccggatgttcaggatctgctgaaagttcctgctcaattatgcccggatgtactg
gcgcttggactactgcaagtcccgcttcaaatgtcaaatttccgtcttgaaatactcgga
agtattatgccgatttttttaggaaaccatcctaactccggcattattttgcaccaagct
tggcacacaagtcaattttgtataaaacaaacgattatgcatgcaatggcagactggtac
ttacgaggggatagcgaccagtcacgtctatcaaggattttagatgtagctcaagatctc
aaagcactatccttgttgttgaacgcccagtcttatccttttgtaattgacttagcctgt
cttgcatcaagaagaggttatcttaaattggaaaagtggctaactgataaaataagagaa
cacgatgaaccttttataacagaactattaaagtttttgcagaaacgagtccctcatatt
tcaggaatgggaaaagaagaaagcatttccaaatcacagttaccccatgaaactttaagt
acaattattctcagcttgcagacttgtgttggaaatgtttcacaagacttgtctgaagca
atacataatgcagttgctacttgcggtgtagttgtaaacaaatctcgtcaagccccacct
ggagtcttgcgtccccacaggggccttgaacctttttctcagtcatctgtttattctagt
caagtcgactctctcaatagtggtctggctggaatgtcactagcgactacatcgactgct
ttcactcttcccgcagctttaggacaacttgtttcaaatcccggttcgccttctcggctg
atggcagcctctcagtcacctgcctttccgataatgccacttggagcacctggcccatct
ttagtgccccaagtgggagttaatgtgccagcaactatggcacgtcttcaacttgcccaa
cagcaacaacctttagaaaaaacgaaaatttctaatgtatcaactaacttgtttcgtgat
atgactttcccagttccaaaagatatagaggatgaggcaaatagttactttcaaaggatt
tacaatcatccgccacatcctacaatatcaattgatgacgttcttgatatgctcaaaaaa
tttatggactcgccaaaacaacgtgaaagagatgttttttactgtatgcttcggaatctt
tttgaagaatataaatttttccctcaataccctgacaaagaactttttgttactgcccag
ctttttggagggattattgaaagagggcttgtctcagattacagagaacttggtatggct
cttcgatatgtcttggatgccttgaaaaaacctctagacagtaaaatgttctattttgga
attgcggctctagatagatttaaatctagattaaaagattatcacaattactgcgaatat
ataatgagcataccacatttttctcgtttcccttcacatttaatagagtacttggaatac
ggcctacaatccgaagaaccgccaaatcgtccacaaggaccaattctaccaggtggaacg
tctgttgtgaccactgcttacaacacattagcccagacaacagtaacgacaactacgact
gtcgctacaaaagtgagcacaacatctgtcatttcatcacggccttctattgcaaatgcc
acgaacatagatacactcttggtagctacagagaaagaagacaaaatggtaacacctcct
gaatcattgcaagataaagttgcatttatatttaataatctcagtcagttaaacttgcaa
accaagtgtgacgaattgagagaaatagtgagcgaggaatattacgcatggatggcacaa
tatttggttatgaagagagctagtattgaattgaattttcacatcctctactctaatttt
cttgatgtacttaaaataccagagttaaatgtattagttctacaagagacatttagaaat
atacgggttttgttgagatcagataaaggcactgctaatttttcggatcggtcattgctg
aaaaatttgggacactggcttgggatgttgactcttgggaggaataaacctattcttcac
gatgatttagacctaaaatctcttcttgttgaagcatacagcaaagggcagcaagaattg
ttgtatgttgtcccatttgttgcaaaagtccttgaatcttgttctaaaagtcaagtcttt
aaacctccaaatccttggactatggcaataatgaatgtgttagctgaacttcatcaagaa
gcagacctaaaacttaacttaaaatttgaaattgaagttttgtgtaaaaatttgtcattg
gatgtttcggaactacacccaaaaatttatttgaaagatccagaaaatttgaaaaatctt
gaacatcaactttcacctcccaaatcaaaagtggaagtgcagagcaccacaccattgccc
ccgtctcaaactcccactcagcaggctactcacaacgttttgtcttcagcaaatgaagag
actccaaccaggcttgcaaacaatacaccaacgttgactccgatcaatccaccggaacca
aggtttaattatttatctatcaatgtcacaaacatcggcaatttggctccacatattata
attaatacacagatgccactgcttcaatctcacccacagttgaaacaatacattagacct
gctcttgagcgagctgtccaagagtggattcatcctgtcgttgaccgagcggttaaaatt
gcagtaactacgacagagcagattgttaaaaaagattttgccctagagccagaagaatcc
agaatgagagctgccgcacatcacatggtcagaaatttagcagcaggaatggctatgata
acatgccgcgaccaacttctggtttctattagtaacaatcttaaagcaaattttctaagt
gctctccataatgcaaccgaacaacaaaaaagtctaatagaacaggctgcctctttgttt
gcacaagaaaatatggaattagcttgctgcttcatccagaagactgcaatggaaaaggct
gtccctgagatggataaacttcttttacctgaatatgaacggcgaaaaatagctagaact
gaaggtagaaggtactgtgattcaagtgttcttacatatcaagctgaacgtatgccagaa
cacctgcggctcaaagtgggtggtgtaacacctcagcagactgctgtttatgaggacttg
gctaggaacattcctggattccaaccgttaacagagagagacactgcgatatttatcccc
aagccagttgattctatgacgatcgtgccttcttttcccagtgcaattcctcaaatggcc
tacagtactgggggagatgaactggacagcatttttgataaactgactaccgaattggac
cattatgttcaaactgttcttggaaaccacacattacctgctgtgcacaacatcttagat
ctacttgttctgactaggagaaaccgagaagatctgtacgcaatgagtcttgtgcagaag
actgttgaaaatttgttggaactgtctaccacatctcttgactcagagttcattcttaga
catagagagttgtacctaagaattcttaaaactttacaagatcctcgagcttacggagtc
cagtggactaataagcaagtcactagggcttacctagattgtcgtgaggaaataaaatac
aatttagactgtctagatgtacttctgaggaaccaattcattaatctgctccagttggat
ttacatcttgcacacgcgatggataatggacagaattacgtagcgatcaattttgctgtc
caagttattcagttctaccttgttgatgacagaaacagcttatcatttgtgacagaccaa
gatttttttaacactagtgaagttcttgtcagaattgctacgcattctcgtcaacctcca
gaaggccttgttgcgcttattgaactactaagagcaactcacgatccagctctcattgtt
gacagtaggactcatgcaagtgcacatattctctcaggccttactcaaggaaaagcaagg
gattatgacgatcctcctggattggccgaaaagacagaatttcttttaagggaatgggtc
tcgatttacaattcagcagcaggtgcaaaagaccctaacaaatcattttccatttttgtc
tctcagatgaattatcatggaattcttaaaactgatgacttaatcacacgattcttcaga
ttgagtactcagatggtagtcgaactttgttatagattccttcccgacgtatcgggtgct
tctgcgacatcttcacgaaacaaaatgttccacactgtcgacgcgtacgtcaaattgatt
tctttgcttgtcaaacattctggcgatgctaccaacacggccacaaaagtcaatttgttg
aacaaagttctcggcattattgctggagttcttcaacaggatcatgaaacacatcagacg
gaatttcaacagttgccctatcagagaattttcatcatgctcttccttgaattaaacgct
catgaatctattcttgaagccattaacttccaggtgttgactgcttattttcatacatta
cacatcctccgtcctgctaaatcaccaggctttgcttatgcctggctcgaactcgtctct
caccgactatttctcgggagaatgttgagcccgactccttctcaaaagtcaaacgttcaa
tcttgtccccaggggtggatcatgtacgctcaacttctggtcgacctgttcaaatacttg
gcaccattcctgaggaatgccgaattggccaagcccgtcacagtactttacaagggtact
ctcagagtacttttggtattattgcatgatttcccggaatttctgtgcgattaccactac
ggcttttgtgatgccattcctccaaactgcattcagatgaggaatctgatcttatcagcg
tttccaagaaatatgaggcttcctgatccttttactcctaaccttaaagtcgatatgttg
gctgaaatttcaagtgctccaagagtattgacagaattcgcttttgttattcagccaact
tcattcaaaaaggatctagaccattatttgaaagcaagaactccagtcacctttttgtca
gatttgagaagcaatttgcaagtttctaatgaacctggattacgttataatattccactt
atgaatgctctagttctttatgttggcactgaagctattgctcatatcaggaaaaagggt
cttgcacctaatatgacaacaattgctcattccgctcacatggacatcttccagaattta
gctgtcgatcttgatactgaagggcggtacttgttcttgaatggcatcgctaaccaactt
cgatatcccaacagtcatacacattacttcagctgcacattactttacttattcgctgaa
gcaaatacagaagctatacaagaacagataacaagagtattattggagcgtttgattgta
aacagacctcacccatggggcctcttaatcacatttattgaactgatcaagaatccgaca
tacaagttttggacacacgaatttgtccattgtgctcctgagatcgaaaagttgttcgag
tctgtggctagatcttgtatggtccaaaaacatgtccaaacaccagctgaaaacaatata
ccggaaataaattataaagcatttaatgacatgacaagaaaataccagcagcacataatg
caagagagtataaaacagtttcaacacgactttctctgttcgaatcaagtagtcatgcaa
cttcggtag
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integrated database retrieval system
