Clavelina lepadiformis (light-bulb sea squirt): 143444300
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Entry
143444300 CDS
T11416
Name
(RefSeq) uncharacterized protein LOC143444300
KO
K06238
collagen type VI alpha
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep04512
ECM-receptor interaction
clep04518
Integrin signaling
clep04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
143444300
04518 Integrin signaling
143444300
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
143444300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clep04147
]
143444300
00536 Glycosaminoglycan binding proteins [BR:
clep00536
]
143444300
Exosome [BR:
clep04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
143444300
Glycosaminoglycan binding proteins [BR:
clep00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
143444300
Hyaluronan
Extracellular matrix or blood plasma proteins
143444300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
143444300
NCBI-ProteinID:
XP_076799604
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Position
1:complement(18869231..18890872)
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AA seq
1188 aa
AA seq
DB search
MKMKIAVATLGLFMLLQSTTFGKKHMKTKRLLSTNRRNVMADALLEVEPLPPDVVMSECT
CRCCEQTPAPLTSPLCANDVVMAVDSSACFRDYYSRMMRFLRKLVRRIGRTPNIQYGGDE
TRLALMQFSSDIVFPLELSSFEHYTNPSTKKGILEGINDQLDNLQFLGEGSFLNKALNAT
VSHIQSQPRPQNLLDQISPVVPRKVVIIMTNGKSHPSVTMNNIETSIAAMENEGITVIPV
SVTRECHGFQSDQWNEGLCPDTVVLGKLAKVGREESSSFMEMTSQDTIPDILNILECHPQ
ASSLTAAPCNNCTCSCELPVGPRGPEGPRGAKGDFVQGEPGIDGETGSKGEVGEKGDRGP
VGEKGSVGEKGIVGDKGEPGNVGEKGDTGDIGPMGKVGQKGEVGDIGPKGAIGKIGPEGP
KGDEGEKGEVGEQGKVGNKGEEGEKGTKGDSGSKGSKGVGEKGRKGQPGPVGPEGPDGRK
GDHGPKGDEGKRGLCGKPGPAGKRGIEGVPGVDGIDGPAGPQGTQGPRGQVGLHGDKGKP
GEPGTTGEEGPRGFPGERGRPGPQGADGLKGEKGEPSREIGPQGFSGPSGQKGEPGVEGA
DGLDGREGPSGRQGPTGPPGPPGPPAVYNLEELRPIIVDIIRELLPGECVANKPNVCNEY
AIDLAFLVDGSDSIDRSDFEQVESWILSTVDAFNPSARRIPLHVNVVQFSEQSQKEVQQM
VEHSSDEIADVVHSIHQMRSGTKSYSALRFVNNNLYPDLRENSFKILITMTDGDASEDKD
IEAIQQARSNFNMMIAAGVGEKVNNDTLQDFSSSQDYIINVNNFVELKSTISSIVENTCS
GIDAILSGMEEPGDTTGGNIFATTSVATTITVYSNDEDDICSESPPFGNCNKPGEDIKIG
KYYWNAVIKRCVLFYYQNCGGGNIFDTEYQCKERCHRPSAPTTTSAAPSSSTTLAPGCYK
AFGDLAFVLDGSASVGETGFAELQRFLLELIKEIPNIGNDGVQVAIIQYNNQPRVEINFE
DYSNKNDLLDAITFIEYLDGNTRTGAALETLSGLFVEAARPDRKKVGVVITDGRSQDDVT
GPSEQLREDGVSLFAVGVGEAEYVELREIASQPTDRYILSVNNYASITQIREELLSKICS
AAEGLYISAEESEAGIEDDLLIPDRKLLTTPAFSREVDETSGEMEFTL
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaagattgctgtagcaacgcttggtctgtttatgctcttgcaaagtactacg
tttggcaaaaaacatatgaaaacaaagcgtttattatctacaaatcgacgaaatgtgatg
gctgatgctctactagaagtggaacctctccccccagacgttgtaatgagtgaatgcaca
tgtagatgttgcgaacagactcctgcccctctgactagtccactgtgcgccaatgatgtg
gttatggctgtcgacagcagtgcttgtttccgggattattacagtagaatgatgagattt
ttgagaaaactcgttagacgaattgggcgcactcctaatattcagtacggcggggacgaa
actcgtcttgctttgatgcagttcagcagtgacattgtgtttccgttggaattgtcttcg
tttgagcattacaccaacccatcaacgaaaaaaggaattttagagggtataaatgatcag
ctggacaatttgcagttcctgggagaaggatcgtttctcaataaagcccttaatgccact
gtttcccatattcaatctcaaccaaggccacagaatttactggatcaaatttctccggta
gttccacgcaaggttgtaattattatgacaaatggcaaaagtcatccgagtgtaactatg
aacaacatagaaacctcgatcgcagcaatggagaatgaaggaatcactgtcattcctgtt
tcagttacaagagaatgccatggattccagtcggaccaatggaacgaagggttgtgcccg
gacactgttgttttgggcaaattagccaaagttggtagagaggaatcttcctcgtttatg
gagatgacgtcgcaggacacgattcccgacatcttaaacattcttgagtgtcacccgcaa
gctagcagcttgactgcagcaccttgcaacaactgcacttgttcctgcgagcttccggtt
ggtccgcgtggtcccgaaggacctagaggcgcaaaaggagacttcgtacagggagaaccg
ggtatagatggtgaaacgggctccaaaggtgaagttggagaaaagggggatagaggtcct
gttggagaaaaggggtcagtcggtgaaaaaggcatagtcggtgataagggtgagcccggc
aacgtcggagaaaagggagacacgggagacattggtcctatgggtaaggttggccaaaag
ggtgaagtcggtgatattggacctaaaggagctattggaaaaattggacctgaaggtccg
aaaggtgatgaaggtgaaaagggtgaagtcggagaacaaggcaaagttggcaacaaaggt
gaagaaggtgaaaagggtaccaaaggagattcaggaagcaaaggatcaaaaggtgtcgga
gaaaagggaagaaaaggacaacctggcccggttggccccgaaggaccagatggacgaaag
ggtgatcacggtccaaagggtgatgaaggaaaacggggcttatgtggaaaacccggacca
gctggcaaacgaggtatcgaaggagtacctggagtcgacggcatagatggtccggcgggg
cctcaaggaacacagggcccaagagggcaagttggcttacatggagacaagggtaaacct
ggtgagccaggtacaactggagaagaaggaccaagaggatttcctggcgaaagaggtcgt
cctggaccacaaggtgctgatggccttaaaggtgagaaaggagaaccatcaagagagatc
ggtccacaaggtttttcagggccttctggacaaaaaggcgagcctggagtagaaggagct
gacggactggatgggagagaaggtccatctggtagacaaggtccaacgggtccacctggc
cccccgggcccaccggccgtttataatttggaagaactaagaccaattattgtcgatatt
atacgagaactactacctggagaatgcgtggctaacaaacccaacgtttgcaacgaatac
gccattgatcttgcttttcttgttgatggaagcgattctattgatcgaagcgatttcgaa
caagtagagtcgtggattttgtctaccgtggatgcattcaatccttcggcaaggaggatt
ccactacatgtaaacgttgtgcagttttctgagcaaagccaaaaagaggtgcaacaaatg
gttgaacatagctctgatgaaatagctgatgtagttcacagtatacatcaaatgcgatct
ggaacaaaatcttacagcgctttaagatttgttaataacaatctgtatcctgatttgaga
gagaattcgttcaaaattctgataactatgaccgacggcgacgctagtgaagacaaagat
attgaggcgattcagcaagctcgaagcaacttcaacatgatgattgccgctggcgttggc
gaaaaagttaataacgatacactacaagattttagttcctctcaagattacataatcaat
gtcaataattttgttgaattgaagagtactatttcctctatagtggaaaacacatgttcc
ggtattgatgccattttatcagggatggaagaacctggggataccacaggcggcaacata
ttcgccactacaagtgtggcaaccaccatcacagtttatagcaacgatgaagatgatata
tgcagcgagtcacctccatttgggaattgcaataaacccggtgaagatataaaaataggg
aagtactactggaacgctgtaattaaacgctgcgttctattttattatcaaaattgcggc
ggtgggaacatatttgataccgaataccaatgcaaagaaagatgtcaccgcccttcggct
cctacgacaacgtcagcagccccatcatctagcaccacacttgcgccaggttgttacaag
gcgtttggagacctcgcctttgtcttggacggaagcgcgtctgttggtgaaacgggtttt
gccgaacttcaacgatttctgttagaattgataaaagaaataccgaacattggcaatgac
ggagtacaagttgccataattcaatacaacaaccaaccaagggtcgagatcaactttgag
gactacagcaacaagaatgacctgcttgatgcgattacgtttatagaataccttgatgga
aatacaagaactggggctgctttggaaactttaagtggactgtttgttgaagctgctcga
ccagaccgcaaaaaagtcggagtggttattacggatggaaggagccaagatgatgttacc
ggtccgtcagaacagttaagagaagacggtgtatctcttttcgcggttggagttggtgaa
gcagaatatgtagaattaagggaaatagcatcccagccaacggatagatacattctttcc
gtaaacaactatgcttccataacccaaatccgcgaggaattgctcagcaagatttgttcg
gcagcagaaggattgtacatatcggcagaggaaagcgaggctggcattgaagacgacttg
ctgatcccagacaggaaactcctaacaacgccagcttttagcagagaagtagacgagacc
tccggagaaatggagtttactctttag
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