Clavelina lepadiformis (light-bulb sea squirt): 143445734
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Entry
143445734 CDS
T11416
Name
(RefSeq) CCR4-NOT transcription complex subunit 10-like isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
143445734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clep03019
]
143445734
Messenger RNA biogenesis [BR:
clep03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
143445734
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Gene cluster
GFIT
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NCBI-GeneID:
143445734
NCBI-ProteinID:
XP_076801146
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Position
2:16614162..16620469
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AA seq
812 aa
AA seq
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MSTDTNTVKPSTSFTEDEQHVAGNAHNCFRAGQFDATLGILKKLQKSHSNDARLMHNRAL
TEFCKSGKTKVLDFKKSLVKIQKLLQQSNKEEEDIVLNTEKNNYISLYYNQALLFYNLHQ
YSETEVILGHLYENLDGSEETYLLKIGLLLIDTYLFTYNPEKAGNLISVLEKNFLTNEDA
TKRSGNNDEKAKSTPTLGMAEAESLKVHLRYLKTLCCLQTKSIKSSKREIKSLTNVYSNS
GGGGQQTNIVQVASVFLKSNFECVRSNYHKAYKLLGASPPPVATNVANGALQEGISTMYY
NNLAVLHFGMGKHNIGSFYMQKALQENDAAVSSATKQHHLNNSSGNSRHQQLSTAKPLCV
LNLNRRFELAYNYGLQLLYSGNPAAAFDSLLLAVHAFHANPRLWLRLAECCIHKCTTCAS
AEGKMKGGSHTKKSNSAFAMIGSGTNRKVVINTSLPPLGTKSNNLTTPLPTLEFASVCLN
NALFLLKEAMNGISWDTVIDIKKNNGSKSDEDQAPELIIACLPGAPLSGNDIIHLYASVL
ANNAFVTLTLGNGLLALEYSQQLLSLPRLSGCNRYLGNMYAAEALVSLDRISEAIQHLSV
EKISTVSLEIDNNGMKSPGSDDGSVKSGQNNKAHNHNHVSQKATEFVSPWHFPSNINCAH
GYMILNLANAHCLRSEHEKAQRLLRQASSLVSARQAPPQALLLAVYLNLQGGGNGLVTAL
LMLRHNSLVVTPQQTSFAAKFPKLVNGNGARPPTGNNSSSFESGSSGGDTNSAAPVNQTR
LKSSTPQPVAGGQTPERVVKAKNNEGKKRNRR
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactgacacaaatactgtaaaaccatcgacttcattcacagaagatgaacaacat
gtggctggaaatgcccacaattgttttagagctggccagtttgatgcaactctcgggata
ctgaaaaaacttcagaaatctcactccaatgatgctcgcttaatgcataatagagcttta
acagaattttgtaaatctggcaaaaccaaagtattggactttaaaaagagcttagttaag
attcagaaacttttgcaacagtccaataaagaagaagaagatattgttttgaatactgaa
aagaataattacatctcattgtattataatcaagcattgctcttttataaccttcatcag
tacagtgagacagaagttatattggggcatctttatgagaatctcgatggctcagaagaa
acatatctactaaaaattggccttttgcttattgatacctatctatttacctacaatcca
gaaaaagcaggaaatcttatttctgttcttgaaaaaaactttttaaccaatgaggatgct
actaaaagaagtggaaacaatgatgaaaaagccaaaagcacaccaactctaggtatggct
gaagctgaatctttaaaagttcatctccgttatctgaaaacactatgttgtctacaaaca
aaatcaatcaaatcaagtaaaagggaaataaaaagcttgactaatgtttactctaacagt
ggtggtggtggtcagcagaccaatattgtacaagttgcatcagtatttttgaaaagtaac
tttgaatgtgtgaggtcaaattaccacaaagcatataagttattgggggcttcccctcca
ccagttgctaccaatgtagccaacggagctctgcaagaaggcatttcaacaatgtattac
aataatttagcggtcctgcattttggcatgggcaagcacaacatagggtccttctacatg
caaaaggcgcttcaagaaaatgatgcagctgtgagcagtgctacaaagcaacatcattta
aataactccagtggaaatagtcgtcaccaacaactgtcaacggccaaaccactttgtgtc
ttaaatttaaataggaggtttgaactggcatataattatggcttgcagctgctttatagt
ggaaacccagcggcagcatttgatagcttgctactcgcagttcatgcttttcatgccaac
cctcgtttgtggctgagacttgctgaatgttgtattcataagtgtacaacctgtgcatca
gcagagggcaaaatgaaaggtggaagtcatactaaaaaatccaactctgcattcgcaatg
atcggttcaggcactaacaggaaagtagtcatcaacacttcattaccgccgttagggaca
aagagtaataatttaacaacacctttacctacattggagtttgcatcagtctgtttgaac
aatgcattgtttctattaaaggaagcaatgaatggcatcagctgggacacagtgattgac
attaagaaaaacaatggttcaaagtcggatgaagatcaagcgccagaactgattatcgcc
tgtctgccaggtgcccctttgtctggaaacgatatcattcacttgtatgcctctgttctg
gcaaacaatgcttttgtgactctaactttgggcaatggacttcttgcgcttgaatattct
cagcagcttctttccttacctcgcctgtctggttgcaataggtacttggggaacatgtac
gccgctgaggctttggtatctttagatcgaatttcagaggcaatacaacatctttctgtg
gagaaaatcagcactgtcagccttgaaattgataacaatggaatgaagtcgccaggttca
gacgacggaagtgtcaaatctggccagaacaataaagcccataaccacaaccacgtgtct
cagaaagcaaccgaatttgtctcgccgtggcattttccttcgaacatcaactgcgctcac
ggctacatgatcttgaacttagccaacgcccattgtctaagaagcgaacatgaaaaggcg
caacgactgttacgacaagcgagttctttggtctcagctagacaagcaccgccccaagca
cttctgctcgccgtttatctcaatcttcaaggcggaggaaatggtttggtgacggcgttg
ctgatgctacgccataatagtttggtcgtgacaccacaacaaacaagttttgctgcgaaa
tttccgaaactagtcaacggcaatggagcgcgcccaccgactggtaataactcatcgtcc
tttgaatccggcagttcaggaggggatacgaactctgctgcaccggttaatcaaacacgt
ttgaagtcgagcactccgcaaccggtagctggaggccaaactccggaaagggtggtcaag
gcgaaaaacaacgagggcaaaaaaaggaaccgacgataa
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