Clavelina lepadiformis (light-bulb sea squirt): 143446941
Help
Entry
143446941 CDS
T11416
Name
(RefSeq) nucleoporin p58/p45-like
KO
K14307
nucleoporin p58/p45
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
143446941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clep03019
]
143446941
Messenger RNA biogenesis [BR:
clep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
143446941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
143446941
NCBI-ProteinID:
XP_076802932
LinkDB
All DBs
Position
1:complement(27698320..27702410)
Genome browser
AA seq
513 aa
AA seq
DB search
MAFGGFGSGSTGSGFSLKGPATTTQSTFSGFGSTSLSASKPLGTGLTLTTSRSATSSAGF
SFGLGLASSGNTSTTTTSFSSGMFGAKSSAPAPSAGLGFGLTSSATSSASISQPVNLLSQ
TQSKPEFKGLGGVDLSSSSTANGNGNKNSTVSQAVKDQAVPDEICKDVQAFEKYVAKQRE
ESNKVGQFSVHSLHKINEEINSVSVALATISSSMQRNKAAVEKLREVFGKQLKHAEMAQQ
THNTPSTLQHDNVAPIRYFVDLVTEFGDSMKLYRLQIDELENHLHTLSQSHFLTPQDISS
ALLKTQETFVILASNLHSVHDNVKHLKEQYLAYRRVVHGDSTDIFHLHDKENQSSSLQKT
SIKGPAPFQNLSNVAALAMASMLQPQQQTVQQAPPQQGFMKSSFGLGGGSSGLFGSTSTA
SGGLFAPKPAASTSNLFGSSTSNNSNIKLGSSNPLKPTLSAGFNKSSSGNVFFGSNQTFN
SAAGVTFGGSASRPAMQLKLGEVPVNNKRNKNK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcttttggtggatttggttcgggatctacaggttctggcttcagtttaaaaggtcct
gccaccacaacacagtccacatttagtggatttggctcaacaagtttatctgcatctaaa
cctttgggcactggattgactttgacgacttcacggagcgctacttcatctgctggattt
tcatttggtcttggtctagcttccagtggcaacacatcaacgacgacaacatcgtttagc
agcggcatgtttggagctaaaagttctgcacctgcacctagtgctggccttggatttgga
ttgacaagttcggccacaagcagtgcaagcatctcgcaacctgtaaacttactgagtcag
actcaaagcaaaccagagtttaaaggtcttggcggtgtcgatttgtcctcaagctcgaca
gcaaatgggaatggaaacaagaacagcactgtcagccaggcggtgaaggatcaggctgtt
cctgatgaaatctgcaaggacgttcaagcgtttgaaaaatatgtcgcaaagcaaagggaa
gaaagcaacaaagtcggacaattttctgttcactcacttcacaaaatcaacgaagaaatc
aacagtgtcagtgtcgctttggcaacaatctcctcctcaatgcaaaggaacaaggctgcg
gttgaaaaattgcgcgaagtgtttgggaagcaattgaagcacgctgagatggcacagcaa
actcacaatactccgtcaaccttacaacatgacaatgttgctccgataaggtatttcgtg
gatttggtcactgagtttggagacagcatgaagctttatcgacttcaaattgacgagctt
gaaaatcaccttcatacgttatcacagagtcactttcttactccacaagacatatcaagt
gctctcttgaagacacaggaaacttttgtcatcctcgcctccaacctgcattccgttcat
gataatgttaaacatttgaaagaacaatatctggcgtatagaagagttgtgcacggggac
tctaccgatatttttcatctccatgataaggagaatcagtctagcagtttgcagaaaaca
tccataaaaggtccggcaccttttcaaaatctgagcaatgtggcagcactggccatggca
tcgatgctgcagccacaacagcagacagtgcagcaagctcccccacagcaaggcttcatg
aaatcttcatttggcctgggtggtggtagcagtgggttgtttggttccaccagcactgcc
tccggtggattatttgcgccaaaacctgctgcgagcacatctaacctatttggaagttca
acttcgaacaattccaacattaagctgggatcgtcgaatccacttaaaccaaccttgagt
gcaggatttaacaaatcatccagtggaaatgtgttttttggaagcaatcagaccttcaac
tccgcagctggcgtcacttttggtggctcggcgagtcgaccagccatgcaactgaagctc
ggtgaagtcccagtaaacaacaaacgaaacaaaaacaaataa
DBGET
integrated database retrieval system
