Clavelina lepadiformis (light-bulb sea squirt): 143449903
Help
Entry
143449903 CDS
T11416
Name
(RefSeq) uncharacterized protein LOC143449903 isoform X1
KO
K06237
collagen type IV alpha
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep04382
Cornified envelope formation
clep04512
ECM-receptor interaction
clep04518
Integrin signaling
clep04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
143449903
04518 Integrin signaling
143449903
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
143449903
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
143449903
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clep04147
]
143449903
00536 Glycosaminoglycan binding proteins [BR:
clep00536
]
143449903
Exosome [BR:
clep04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
143449903
Glycosaminoglycan binding proteins [BR:
clep00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
143449903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
143449903
NCBI-ProteinID:
XP_076806354
LinkDB
All DBs
Position
3:complement(19755327..19777069)
Genome browser
AA seq
1817 aa
AA seq
DB search
MTASSNRLRPVFAWAIAAVLVSIATITNGKGLGYGQVRGRGCDGSGAITYCNASKGDRGM
TGLPGMNGPPGLPGYPGPEGAVGPMGLPGKNGLDGMQGEKGQRGTQGPHGYPGTPGIPGL
PGGGGPPGPPGLDGCNGTKGDRGPLGPPGFSGENGVPGFSGTKGMKGERGEVINLVPGKK
GDAGRPGRPGPAGEDGELGFAGPIGPPGRTGPPGPPGPAGYPGDKGNMGQGVQGEKGEKG
DAGLSGKPGGIEEANQPPFGDVPQFDGIPGIQGSPGGGTQPAEGGKGHITAGPPGKDGQP
GEKGEPGEKGEAGFPGSSGLPGMKGQKGGKGEYGPTGPQGTKVGKPGTPGVNGIDGDKGD
RGYPGFGGRDGVKGNKGEIGESGPAGRPGQTGPGGEAGEVGADGPMGPPGPKGDMGFEGI
SGLNGLKGSQGEPGVPGETGPVGPPGYGIQGPPGEPGPSGSAGLPGRPGPQGQEGPKGEK
GVIGLTIQGPPGQDGRPGLPGRAGLPGRPGPTGESGVDAVITHEIMEDMVQPGDRGLPGP
PGQPGRPGAPGGTGEVGDVGPKGEECGVCERGPQGMPGPLGPQGSPGIPGDMGDAGEPGQ
KGQKGFEGFSGPPGKTGRPGPEGMVGAPGRKGETGELTLVQIKGQKGSTGPLGLAGPPGE
AGQPGSDGRDGASGPKGTKGELGQPGQRGPSGDTGDIGLPGENGRDGIDLPGDQGETGAP
GESGAQGDIGLPGLAGRKGEPGIARLIPGEKGMQGVPGPTGFPGDDGERGERGPSGEAGF
AGDKGQKGATGVPGESRRGLPGRKGYSGVAGEKGAPGVPGQDGMDGMRGLDGLRGPPGDD
GIGVPGRPGREGEVGPSGESGPVGERGRPGPVGSPGPQGEVGPQGAEGEPGERGAPGSQG
LKGEVGEAMMGPPGISGPEGAQGRRGLQGPAGETGEPGRPGRDTVGMKGEQGETGEVGEP
GLPGIQGSPGQRGLDGLEGAPGRDGAKGESGQPGRGGRRGPTGFPGPKGGQGADGIPGQD
GMPGIPGEAGDDGVSGLRGPPGPKGESASLPANLLEKGQKGQPGSLGPTGPPGDKGSQGD
VGEKGSTGFPGEKGAPGFAGQEGLEGLSGEDGEQGSKGSKGEIGMPGPAGDRGERGDAGP
PGLPGFAGIVGAKGEKGAPSKTPGLSGTPGIPGQNGMDGRPGLPGEEGPAGEPGVNGEPG
VKGDKGSVGAVGFPGPQGRLGAKGQHGDTGPAGRPGTPGLRGLDGLTGEKGMIGMVGLPG
TDGLPGPRGDRGEPGESVSGPTGRPGRTGEPGDRGEPGPDGREGAPGVRGDKGEIGPIGP
EGRRGRTGEPGPRGASVKGERGATGSPGLGGLNGQDGLPGTPGLPGLTGDDGEPGEVGEP
GREGFPGFNGAKGSTGPPGPTGLRGLPGEFGEPGERGDQGPPGRRGEPGPNGLPGTEGMS
GQKGVKGADGLPGEDALPIVREGPKGQQGPIGPPGRTGTQGPRGGRGSIGLTGMKGQTGQ
DGMPGLSGLAGDRGEPGAQGPVGLPGMPGEDGRDGRDGFPGNAGASALFHGYFLTRHSQT
SDIPDCPRGMQRMWGGYSLLFIQGNERAHGQDLGTAGSCLRRFSTMPFLFCNVNNNCRVA
SRNDYSYWLSTPEPFPMSMEEVSGANIEPYISRCSVCEAPSVTIAVHSQSDDVPDCPDGW
EGLWIGYSFVMHTSAGAEGSGQSLQSPGSCLEDFRAGPFVECHGRGTCNQYANGYSFWLA
TIMPDNQFKNPISETLKSGSLRQRISRCQVCLRSDASVPSSGSANRGDSLNRRSANESSR
RVSSSARFAGPSFSSQQ
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgtcaagcaacagattgaggccggtttttgcttgggccatagcagcagtcctg
gtcagcatcgcgacgataacaaatggaaagggcttgggctatggacaagtgagaggaaga
ggatgtgatggatcaggtgccatcacctactgtaatgcttccaagggagataggggtatg
actggactgcctggtatgaatggacctccaggattacctggttaccctggacctgaagga
gcagttggacccatgggacttcctggtaaaaatggtttggatggaatgcaaggtgaaaaa
ggtcaacgaggtacacaaggtccacacggatatcctgggacacctggtattcctggattg
cctggtggtggaggccctcctggaccccctggcctagatggttgcaatggcacaaagggt
gaccgtggtccacttggtcctcctggtttttctggtgaaaatggtgttcctggattctct
ggaactaaaggcatgaagggtgagcgtggtgaagtaatcaaccttgtcccaggaaagaaa
ggcgacgccggccgtcctggacgtcccggcccagcgggagaagatggtgagctaggtttt
gctggtccgattggacctcctgggcgaactggaccccctggtccacctggcccagccggt
tatcctggtgacaagggtaacatgggtcaaggtgtccaaggtgaaaaaggtgaaaaggga
gacgctggtcttagtggaaagccaggtggaatagaagaagcaaatcaacctccgttcggt
gatgttcctcaatttgatggtataccggggattcaaggatcccctggaggtggaacacaa
cctgcagaaggaggaaagggtcatattacggccggaccacctggcaaggatggacaacca
ggagaaaaaggtgaaccaggtgagaagggagaagcaggatttcctggatcatccggtcta
cctggaatgaaaggacaaaaaggtgggaaaggtgaatatggaccaacagggccacagggt
acgaaagtcgggaagcctggaacgcctggagttaacggaatagatggtgataaaggagac
agaggctaccccggatttgggggacgtgatggagtgaagggaaacaagggcgaaataggt
gaaagtggccctgctggacgaccaggacaaactggaccgggtggagaagcgggtgaggtg
ggtgctgatggacctatgggacctcctggacccaaaggagacatgggttttgaaggcata
tctggtttgaatgggttgaaaggttcacaaggtgaacctggagttcctggagagactggg
ccagttggtccaccaggttatggcatccagggaccaccaggagaacctggaccatctgga
tctgcaggtttacctggcaggcctggaccccaaggtcaggaaggaccaaagggagaaaaa
ggtgtaattggtctcaccattcagggtccacccggtcaagatggtcgacctggcttacct
ggacgagctggcctaccaggacgtcctggaccgaccggagaaagtggtgttgatgctgta
attactcacgaaattatggaagatatggttcaacctggtgacagaggtctgcctggtcca
cctggacaaccaggacggcccggcgctcctggtggaacaggtgaagttggtgatgttggt
ccgaaaggtgaagagtgtggcgtttgtgaacgaggtccacaaggaatgccaggacctctt
ggacctcaaggttctccaggtatacctggagacatgggtgacgcaggagagcccggtcag
aaaggtcagaagggttttgaaggattcagtggtccaccaggaaaaacgggtcgcccaggt
ccagagggtatggttggtgctcctggaagaaaaggtgaaactggggaactgacacttgtg
caaataaaaggacaaaaaggatcgactggacctcttggactcgctggacctccaggtgaa
gccgggcaacctggcagcgatggccgtgatggtgcttctggacctaaaggcaccaaaggt
gaacttggtcaacctggacaacgtggtccatctggtgataccggtgacattggtctgcct
ggtgaaaatggacgtgatggaatagacttgcctggagaccagggtgaaactggtgctcct
ggtgaatccggtgctcagggtgacattggtttacctggattagctggtcgaaagggagaa
cctggcattgctcgtctgattcctggtgagaagggaatgcaaggtgtaccaggaccaact
ggcttccccggtgacgatggagaacgcggtgaaagaggtccatctggtgaagctgggttt
gctggagataaaggacagaaaggtgcaacaggtgtaccaggagaaagcagaagaggtttg
cctggacgaaaaggatactctggtgttgctggtgaaaaaggtgcacctggtgtgcctggc
caagatggtatggatggaatgcgcggtcttgatggtctacgtggtccacccggtgatgat
ggaataggtgttcctggcagaccaggtagagaaggagaagtaggaccatcaggtgaatct
ggtccagttggtgaaagaggacgaccaggcccagtcggttcaccggggccccagggcgaa
gtgggaccacaaggagctgaaggtgaaccgggtgaaagaggtgcaccaggtagccaaggt
ctaaaaggtgaagtaggagaagcgatgatgggacccccaggtatttctggtccagaagga
gcacagggtcgaagaggattacaaggccccgcaggtgaaactggtgaacccggccgtccc
ggacgggatacggttggaatgaaaggcgaacagggtgagaccggtgaggtcggagaacct
ggtttgcctggaatccaaggttcacctggtcaacgtggtctggatggtttggaaggtgct
ccaggaagggatggtgcaaagggcgaatcgggacaacctggtcgaggcgggcgacgtgga
ccaactggattcccgggccctaagggtgggcaaggtgcagatggaatacctggacaagac
ggaatgcctggtatacctggcgaggctggtgatgatggtgtttcgggtctacgtggacct
cctggtccaaagggcgaatctgcttcattaccagcaaacctcctggagaagggtcaaaaa
ggacaaccaggttctctgggtcctaccggccctcctggtgataaaggatctcagggagac
gtcggagagaaaggatctacaggttttccgggagaaaaaggtgcaccgggttttgctggg
caagaaggtcttgagggtctgtctggcgaagatggagaacaaggttcaaaaggttcaaaa
ggagaaattggtatgccgggtcctgctggtgacaggggtgaacgtggagatgctggtccc
ccaggtcttcctgggtttgcaggtatcgttggggcaaagggagaaaagggtgctccaagc
aaaacacctgggctatctggaacgccaggaatacctggtcaaaatggaatggacggacgt
cccggattacccggtgaagaagggccggctggggagccaggtgttaatggagagcctggt
gtgaaaggagataagggatctgttggtgctgttggtttccccggtccacagggaagactt
ggtgcaaaaggacaacatggtgatactggtccagcgggtagacctggtaccccgggtctt
agaggtctcgatggtttaactggtgaaaagggtatgattggaatggttggattgccgggt
actgacggattgcctggtccacgtggtgatcgtggtgaacccggagaatctgtatctggt
ccaaccggacgtccaggcagaaccggtgaaccgggtgatagaggagagccaggacctgac
ggacgcgaaggagcacctggtgttcgaggtgataagggtgaaatcggcccaataggaccg
gaaggacgacgtggacgcacgggtgaacccggaccacgaggtgcatctgtcaaaggtgaa
cggggagcgactggttcacctggactaggcggcctaaatggccaggatggtctaccagga
acaccgggacttccaggtctgacaggtgacgatggcgaacccggtgaggtcggtgaaccc
ggtcgagaaggcttccctggatttaatggtgcaaagggttcaactggacctcctggtccc
acgggcttgcgcggtctccctggtgaattcggcgaacctggcgaacgtggtgatcagggt
cctccaggacgtcgtggtgaacctggaccgaatggactgcctggtactgaggggatgtct
ggacaaaaaggcgttaaaggtgcggacggtttgcctggtgaagacgccttacctatcgta
cgggaaggacccaagggacagcaaggtccaattggtcccccgggacgcacaggcactcag
ggaccaagaggaggccgaggctcgatcgggttaaccggaatgaagggtcagactggtcaa
gacggtatgcccgggttgtctggattggcaggtgaccgtggtgaacccggtgctcaaggt
cccgtcggccttcccggaatgcccggtgaagacggtcgcgacggccgtgatggtttccca
ggaaatgctggtgcttcggctctcttccacggctacttcttgacccgacacagtcagaca
agcgacattccggattgcccgcgtgggatgcagaggatgtggggtggttactccctgctc
ttcattcaaggaaacgaacgcgcacatggccaagatctcggaaccgctggttcgtgtctc
cgtcgtttcagcaccatgcccttcttattctgtaacgtgaacaacaactgccgtgtcgct
tctagaaacgattactcttattggctctccacgcccgagcccttccccatgtccatggag
gaggtgtcaggagccaacatagaaccctacatcagtcgctgttcagtttgcgaagctcct
tcggtgactatcgctgtccacagccagtcagacgacgttccagattgccctgacggttgg
gaaggtctctggattggttacagctttgtgatgcacactagcgccggtgcggaaggcagc
ggtcagtcacttcagtctcctggttcctgtttggaagattttagagcgggtccgtttgtc
gaatgccacggacgtggaacatgcaaccaatatgccaacggttacagcttctggctagct
acgatcatgcctgacaatcagttcaagaatcccatctccgaaaccttgaagtctggttca
ttacgtcaaagaatcagccgctgtcaagtctgcctgcgaagtgacgcgagcgtgccgtct
agcggtagtgcaaatcgaggcgactccttaaaccgcagatcggcaaacgaatcttcacgg
cgggtctcgtcgtccgcgcgtttcgctggaccgtccttcagtagccaacaatga
DBGET
integrated database retrieval system
