Clavelina lepadiformis (light-bulb sea squirt): 143449953
Help
Entry
143449953 CDS
T11416
Name
(RefSeq) UV-stimulated scaffold protein A-like
KO
K23720
UV-stimulated scaffold protein A
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
143449953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clep03400
]
143449953
DNA repair and recombination proteins [BR:
clep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
143449953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
143449953
NCBI-ProteinID:
XP_076806423
LinkDB
All DBs
Position
3:complement(2307270..2309709)
Genome browser
AA seq
663 aa
AA seq
DB search
MGEQLELSLAQELEALIEKLVTSGESSLAKPTIKKIKSHCKKNNKCVEHVFHLLLTHLEK
DHSEIRFSAFQIASELFSRSHLFRTMLLDSFQTFMDLTVETDFDNPLPPPKITADKLKLE
ALTTIRGWNDKYGIAYRKLKRGFDYLKHVKKINFDQLQNINQTYAQQFRLNQQQIVNATK
LDKVVKEIDSNLWEVEACVAEINNGLKLIVPTFLEEDIPSVENSAASNSPQSSGKSGNNT
QDRQAYGLPDRGYTLQLNLAEISTINVTQTSDNKAVFARIKDCIKSANRIHLPRLREWLT
TGGKCGAPPETMRKLVDVKDTMQKCLDKYNELNGDCESDEEDFDDFIEVPEASSTKRFKS
KVSLKAAKKEKLKRSSDTNIWKPLRSDNSMNDPTSYQYALAKQAESRKRAKKEDNFSSQL
PRKKEFPAKKSTSHNGTPKKDPLKEKAPVVPFGHDLLTWDKERFKELRQNLKLGATKELD
IGHRFWSGHSASEGDSGVSDAALNSLTSRTIEFTGTFEAVIKSCRAPLSNGKLCPRKDRH
KCPFHGKIIDRDVLGNPVSSDQPSTSSFMDRPASSDWQDPSFLRDVHAGLGGKIDLSLKR
KKGKKKSENGLTNLKTVKNTSRGRLQKKVLQPSSLKRVNETLNQLDMKRNFDKFGNNFNY
ALH
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgggggaacaattggaattatcgttggctcaagagttagaagccttgatcgaaaaactt
gtaacaagcggagaatcatctttggctaaacctacaataaaaaaaatcaagtcccactgc
aagaaaaataacaaatgtgttgagcacgtttttcatcttttgctgacacatttagaaaaa
gaccacagtgaaattcgtttttcggcttttcaaattgcgagtgaactgttctcaaggtct
catttgtttcggacgatgctgttggacagtttccaaacatttatggacttaactgtggaa
acagattttgataatcctcttcctcccccaaaaatcacagcggacaaattgaaattagaa
gcactcaccacaattcgtggctggaatgataaatatggaatcgcatatcggaaacttaag
cgtggctttgactatctaaaacatgtgaaaaaaataaacttcgatcagttgcaaaacatc
aatcaaacttatgctcaacaatttcggttaaaccaacagcaaattgttaatgctaccaag
cttgataaggttgtaaaggaaattgactccaacctatgggaagtcgaagcttgtgttgcg
gaaataaataacggcttgaaactaattgtacccacttttcttgaggaggatattccttct
gtcgaaaactctgctgcgagtaacagtcctcagtcaagcggtaaatctggaaataatact
caagatcgtcaagcatatggtttgccggatcgaggatatactctacaacttaatctggct
gagatatctactataaatgtaacacagacgtcggacaacaaagctgtatttgctcgaata
aaagactgcattaaatctgcaaatcgtattcatctgcctcgtcttcgtgagtggttgact
acaggtggaaaatgtggtgctcctccggagaccatgcggaaactcgtggatgtgaaagat
actatgcaaaaatgtctggataagtataatgagttaaacggtgattgtgagagtgatgag
gaagattttgatgattttattgaagtcccagaagcatccagcacaaaacgcttcaaatca
aaagtatctttaaaagcagctaagaaagaaaaactaaaaagatccagtgatacgaacatt
tggaaacctctgagaagtgacaatagcatgaacgatcccacttcgtaccaatatgctcta
gcaaagcaagctgaaagccgtaagcgagctaaaaaagaggacaatttttcatcacaactt
ccccggaaaaaagagtttcctgccaaaaagtcaacttctcataatggaacgccgaagaaa
gatcccctgaaagaaaaagcccccgttgttccgtttggtcacgatcttctgacctgggac
aaggaacgtttcaaagaactgagacagaacctgaaacttggtgcaacaaaagagcttgac
attgggcatagattttggtccggacattctgcgagtgaaggcgacagtggagtctccgat
gctgcattaaactcattaacttcgcgaactatcgaatttaccgggacgtttgaagctgtc
ataaaaagctgccgtgctccattatctaatggcaagctgtgtcctcgcaaagatcgccat
aagtgcccttttcatggaaaaattattgatagagatgtacttggaaacccggtgtcatcc
gatcaacccagcacatcatctttcatggatcgacctgcatccagtgattggcaggatcca
tccttccttagggatgttcacgctggtctaggaggaaaaatagatctttctctgaagagg
aagaaaggcaaaaagaaatcggaaaacggtttaacaaacttaaaaactgtaaagaatacg
agtcgtggtcgattgcagaagaaagttcttcagccttccagtttaaaacgagtcaatgaa
acactgaatcagttggacatgaagcgaaattttgacaaatttggcaacaactttaattat
gctttgcattga
DBGET
integrated database retrieval system
