Clavelina lepadiformis (light-bulb sea squirt): 143460960
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Entry
143460960 CDS
T11416
Name
(RefSeq) THO complex subunit 7 homolog
KO
K13176
THO complex subunit 7
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
143460960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clep03019
]
143460960
03041 Spliceosome [BR:
clep03041
]
143460960
Messenger RNA biogenesis [BR:
clep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
143460960
Spliceosome [BR:
clep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
143460960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
143460960
NCBI-ProteinID:
XP_076814778
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All DBs
Position
5:2234954..2238116
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AA seq
203 aa
AA seq
DB search
MAAASDDEVIRKRLLIDGDGGGDERRLNALMKLFIKWCNAPDSDSSTHQRMLSFLAQSEL
AMTKTSFVYEMNKRQMEKYTQLQQEIDKQVELAHVEIEKCKEELEEAKLVRRNRQEYDAL
AGVVLQQPDRQQTDSEIGDLNKELEELRSTEEQLMMKLDLRKKQFHALLTSIYQLQETLK
EEEEEERREEEKVEESLMDTSPP
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggcaagtgacgatgaagtgattcggaagcgacttctgatcgacggagatggt
ggtggagatgaaagaagattaaatgctctgatgaaactctttatcaaatggtgcaatgct
ccagactctgacagttctacgcatcaaaggatgttatcgttcttggctcagagcgagctt
gcgatgacaaaaacctcatttgtgtacgagatgaataaacggcagatggaaaaatacact
cagctgcaacaagaaattgacaagcaagttgaactcgcccatgttgagattgaaaagtgt
aaagaagagctggaggaggcaaaattggttcgaaggaatcgacaagagtatgacgctttg
gcaggagttgttttgcaacaaccggatcgtcagcaaaccgacagtgaaataggggattta
aacaaggaactggaagagcttcgatcaaccgaagagcaacttatgatgaagttggacctc
cgcaagaaacagtttcacgctttactcacctcaatctaccagctgcaggaaactttgaaa
gaagaagaggaggaagagagaagagaagaggagaaagtcgaggagtcactgatggacacc
tctccaccataa
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