Cellulophaga lytica HI1: IX49_03695
Help
Entry
IX49_03695 CDS
T03279
Name
(GenBank) penicillin-binding protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
clh
Cellulophaga lytica HI1
Pathway
clh00550
Peptidoglycan biosynthesis
clh01100
Metabolic pathways
clh01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
clh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IX49_03695
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IX49_03695
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
clh01011
]
IX49_03695
Enzymes [BR:
clh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
IX49_03695
Peptidoglycan biosynthesis and degradation proteins [BR:
clh01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
IX49_03695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AIM59664
LinkDB
All DBs
Position
845828..847708
Genome browser
AA seq
626 aa
AA seq
DB search
MKKFLLSSFIILIGLSFLGRLSYLQIFSFSPNQILEDPAIKTLYDFPERGYIYDRNGKLL
VANQAAYDVMVIPREVKPLDTLEFCNLIGIDKSTFIKNLKNARKHSPRLPYVMVSQLSKE
DYAKLQEKMRKYEGFYIQKRSQRYYDTKSAANALGYISQVTPGDLKKFPYYSQGELKGKT
GVEKQYEDILRGRKGVKYIQKDRFNRDIGPYKNGALDTLPEPGKEIQLTIDKELQEYGEK
LMVGKHGGIVALDPNSGEILSLISGPTYDPALLVGRKRSANYSKLYYDSIAKPTWDRSLL
AQESPGSPFKVINALVALQEDVMTPEDKIRCYNGFYVGKNRTKRGCHCGGGLRDMYSGIY
KSCNAYFAGTFKQIFDKFETTDEAMDVWQKHVKSFGLGEYLGTDLPTGSRGRIPGKEYYD
RVYGDNRWTWSYIVSISFGQGEVAVTPIQLANMTAAIANKGYYYTPHILKKVEGKPITDP
KYTQRKYTTIDKENFEPVIKGMEAVYKTPGGTAHWLQVPGINIAGKTGTVENFTRINGVR
TQLTDHSIFVAFAPVENPKIALAIFIEHGYFGGRYAGHIASLMIEKYLKGEITRKDLEKK
MLEKTLEKEYAKPYSGEPFPINERVW
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattcctactttcatctttcatcatcttaataggactatcctttttaggaagg
ttatcctatttacaaatttttagcttttctcctaatcaaatattagaagaccctgcaata
aaaactttgtatgattttcctgaacgcggttacatttatgaccgtaacggaaaattgctt
gtagctaaccaagctgcttatgatgttatggttataccaagagaggttaaaccgttagac
actctggagttttgtaatttaattggcattgataaaagtacatttataaagaaccttaaa
aatgcacgcaaacattcccctaggttgccatatgtaatggtttcacaattatctaaagaa
gattatgccaagctacaagaaaaaatgcgaaagtatgaagggttttatattcaaaaacgt
tctcagcgttattatgataccaaaagtgctgcaaatgctttaggatatattagccaagta
acacctggcgacttaaaaaaatttccatattacagtcagggtgaattaaaaggaaaaacc
ggagtagaaaaacaatatgaagatatattacgaggaagaaagggcgtaaaatatatacaa
aaagatagatttaacagagatattggcccttataaaaacggcgcactagatactttacca
gagcctggcaaagaaatacaattaaccatagataaggaactgcaagaatacggagaaaaa
ttaatggttggtaaacatggaggtatagttgcgctagatcctaattctggtgaaatatta
tcattaatttctggccccacttatgacccagccttattggtaggcagaaaacgttctgcc
aattacagcaaactgtattatgatagtattgccaaaccaacttgggatagaagtttactt
gcccaagagtctccaggttctccttttaaagtaattaacgcacttgtagctttacaagaa
gatgttatgactccagaagataaaatacgttgctataatggtttttacgttggaaaaaac
agaaccaaaagaggatgccattgcggtggaggtctaagagatatgtatagcggaatttac
aaatcatgtaacgcttattttgctgggacttttaaacaaatttttgacaagtttgaaact
acagatgaagctatggatgtgtggcaaaaacacgttaaaagttttggacttggagaatat
ttaggaaccgatttacctactggaagcagaggacgaattcctggaaaagaatattatgac
agggtttatggagataatagatggacgtggtcttatattgtttctatatcatttggacag
ggtgaagttgctgttacacctatacaattagctaatatgaccgctgctattgctaacaaa
ggctattattataccccacatattttaaaaaaggtagaaggcaaaccaattacagaccca
aaatacacccaaagaaaatatactactatagataaagaaaattttgagccagttattaaa
ggtatggaagctgtgtacaaaaccccaggtggtactgcacattggctacaagttcctggt
attaacattgccggaaaaactggtactgtagaaaactttaccagaattaatggcgttaga
acacaacttacagaccactctatttttgttgcttttgctcctgtagaaaacccaaaaatt
gctttagctatttttatagagcacggttattttggaggaagatatgccggacatatagct
tcgttaatgattgaaaaatatttaaaaggagaaattacccgtaaagacttagaaaagaaa
atgcttgaaaaaactttagaaaaagaatatgcaaagccatatagtggcgagccttttcct
attaacgaaagagtttggtaa
DBGET
integrated database retrieval system
