Campylobacter lari NCTC 11845: UPTC3659_0899
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Entry
UPTC3659_0899 CDS
T03552
Symbol
rep
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cln
Campylobacter lari NCTC 11845
Pathway
cln03420
Nucleotide excision repair
cln03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
UPTC3659_0899 (rep)
03430 Mismatch repair
UPTC3659_0899 (rep)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cln03400
]
UPTC3659_0899 (rep)
Enzymes [BR:
cln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UPTC3659_0899 (rep)
DNA repair and recombination proteins [BR:
cln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UPTC3659_0899 (rep)
MMR (mismatch excision repair)
Other MMR factors
UPTC3659_0899 (rep)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
AAA_30
ResIII
Churchill
Motif
Other DBs
NCBI-ProteinID:
AJD01744
UniProt:
A0A0A8HV31
LinkDB
All DBs
Position
866667..868694
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AA seq
675 aa
AA seq
DB search
MPLSRLNEEQYKAASAPFGHNLIIASAGTGKTSTIVARIAFLLQNGIKPEKIMLLTFTNK
ASKEMIERLGRYFDKSITSKITAGTFHSTAYTLLKELNHDIILKPASELKILLRSIFEKR
TFHHLSDIKPYMPSYLYDVYSLFQNTNANLDEFYNWFCQNYDEQAVYAEIYEDILKEYEE
EKARFNYVDFNDLLIKLKHVLASHHFEFDEILVDEYQDTNTLQGSLIDAFKSKSLFCVGD
YDQSIYAFNGADISIIGSFKDRFIDANIFTLNKNYRSSKNILALANKVILNNERLYSKEL
IVTREGDFKAPSLLTFNELFDQYSTIAKIILQSGVNLDEIAVIFRNNSSADGVEVALREL
GIASKRKGGGSFFESLEVKNFCSMLAIVLNPKDIMAFIHLLEYTKGVGGVLAKDIFDALL
KLGHSSLIKGFLNPDVSVSLKKYKKQSYQLGLFDDIEELASPSRFNLESEFNTHPILSLP
KINDICAKNLEKIYLFIKKASECKISTQLVNLILENDYFKEICDILATKRATNKNSNVDL
NKKSEILEKINAKMFVLKELAKNYSDNYKYYNFLTLGASEMSSGNGVNLLSIHASKGLEF
ELVFVIDLAQGRFPNQKLMSMGGSLEEERRLFYVAVTRAKDTLYLSYAKYDKIKKSTYQP
SCFLIEAGMCKEEQK
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgcccttatcgcgtttaaacgaagaacaatataaagctgctagtgctccttttggacac
aacctaatcatagcaagtgcaggcacaggcaaaacttcaaccatagttgcaagaatagct
tttttacttcaaaatggtataaagcctgaaaaaattatgcttttaacctttacaaacaaa
gctagtaaagaaatgatagaaagacttggcaggtattttgataaaagtattacttcaaaa
atcacagcaggaacctttcatagcaccgcttacactttgcttaaagaattaaatcatgat
attattttaaaacctgcaagtgagcttaaaattcttttgcgttctatttttgaaaaacgc
acttttcatcatttaagtgacattaaaccttatatgccaagctatttgtatgatgtgtat
tctttatttcaaaataccaatgcaaacttagatgaattttataattggttttgtcaaaac
tatgatgagcaagctgtttatgctgaaatttatgaagatattttaaaagaatacgaagaa
gaaaaagcgcgctttaactatgtggattttaatgatttattgataaaattaaaacatgtt
ttagcttcacatcattttgaatttgatgaaattttagtagatgagtaccaagatactaat
actttacaaggctcgcttattgatgcttttaaaagtaaaagtttattttgtgtaggagat
tatgatcaaagtatttatgcttttaatggagctgatatttctattataggaagttttaaa
gatagatttattgatgcaaatatttttactttaaataaaaactatcgttctagtaaaaat
atacttgcactagccaataaagtaattttaaacaatgaaagattatattctaaagaatta
attgtaactagagaaggagattttaaagctccaagtttgctaacttttaatgaattattt
gatcaatactctactatagcaaaaataatcttacaaagcggggttaatcttgatgaaatt
gctgtgatttttagaaataactctagtgcagatggagtagaagttgccttaagggaactt
ggcatagcaagtaaaagaaaaggcgggggaagcttttttgaaagtttagaggtaaaaaac
ttttgttctatgctcgcaattgtgcttaatccaaaagacatcatggcttttatacactta
cttgaatacactaaaggagttggcggggttttagcaaaagatatttttgatgctttatta
aaactgggacattctagtttgattaaaggctttttaaatcctgatgttagtgtaagttta
aaaaaatataaaaagcaaagctatcaactaggactttttgatgatattgaagaactagct
tctccatcaaggtttaacctagaaagtgaatttaacacccaccctattttaagcttgcct
aaaatcaatgatatttgcgcgaaaaatcttgaaaaaatttatctttttataaaaaaggca
agtgaatgtaaaatttcaactcaacttgtgaatttgattttagaaaatgattatttcaaa
gaaatttgtgatattttagcaaccaaaagagcaaccaacaaaaattctaatgtagattta
aacaaaaaaagtgaaattttagaaaaaattaatgcaaaaatgtttgtattaaaagaactt
gcaaaaaattatagtgataattacaaatactataatttccttactcttggtgctagtgaa
atgagtagtggtaatggggttaatcttttaagcatacatgcaagcaagggacttgaattt
gaacttgtatttgtaattgatcttgcacaaggaaggtttccaaatcaaaagctcatgagt
atgggtggaagtttggaagaagaaagaagacttttttatgtagcagtaactagagctaaa
gatactttgtacttaagttatgcaaaatatgataagattaaaaaaagcacttatcaacct
tcatgttttctaatcgaagcaggtatgtgtaaagaagaacaaaaataa
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